RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W TIR4Q12218 487 aaPredicted RBP5.22□□□□□ -1.57
CAF40YNL288W ORT1Q12375 292 aa5.22□□□□□ -1.57
CAF40YNL288W TRM13Q12383 476 aa5.22□□□□□ -1.57
CAF40YNL288W TMA17Q12513 150 aa5.22□□□□□ -1.57
CAF40YNL288W SUS1Q6WNK7 96 aa5.22□□□□□ -1.57
CAF40YNL288W HIS3P06633 220 aa5.21□□□□□ -1.58
CAF40YNL288W SGA1P08019 549 aa5.21□□□□□ -1.58
CAF40YNL288W YML003WP0CF16 290 aa5.21□□□□□ -1.58
CAF40YNL288W REC114P32841 428 aa5.21□□□□□ -1.58
CAF40YNL288W ZRT3P34240 503 aa5.21□□□□□ -1.58
CAF40YNL288W YBR137WP38276 179 aa5.21□□□□□ -1.58
CAF40YNL288W MBA1P38300 278 aa5.21□□□□□ -1.58
CAF40YNL288W GAT2P40209 560 aa5.21□□□□□ -1.58
CAF40YNL288W ATF1P40353 525 aa5.21□□□□□ -1.58
CAF40YNL288W YIL029CP40538 142 aa5.21□□□□□ -1.58
CAF40YNL288W AVT4P50944 713 aa5.21□□□□□ -1.58
CAF40YNL288W YIP4P53093 235 aa5.21□□□□□ -1.58
CAF40YNL288W TIM10P87108 93 aa5.21□□□□□ -1.58
CAF40YNL288W SED1Q01589 338 aa5.21□□□□□ -1.58
CAF40YNL288W YKR005CQ02203 525 aa5.21□□□□□ -1.58
CAF40YNL288W NMA1Q06178 401 aaKnown RBP5.21□□□□□ -1.58
CAF40YNL288W MRX9Q07349 420 aaKnown RBP5.21□□□□□ -1.58
CAF40YNL288W GAT3Q07928 141 aa5.21□□□□□ -1.58
CAF40YNL288W MSH5Q12175 901 aa5.21□□□□□ -1.58
CAF40YNL288W SPO24Q3E752 67 aa5.21□□□□□ -1.58
CAF40YNL288W YBR182C-AQ8TGU6 64 aa5.21□□□□□ -1.58
CAF40YNL288W RPS18AP0CX55 146 aaKnown RBP5.2□□□□□ -1.58
CAF40YNL288W RPS18BP0CX56 146 aaPredicted RBP5.2□□□□□ -1.58
CAF40YNL288W HNM1P19807 563 aa5.2□□□□□ -1.58
CAF40YNL288W DAL80P26343 269 aa5.2□□□□□ -1.58
CAF40YNL288W CNE1P27825 502 aa5.2□□□□□ -1.58
CAF40YNL288W MNS1P32906 549 aa5.2□□□□□ -1.58
CAF40YNL288W YKL187CP34231 750 aa5.2□□□□□ -1.58
CAF40YNL288W EGT2P42835 1041 aa5.2□□□□□ -1.58
CAF40YNL288W CIN2P46670 268 aa5.2□□□□□ -1.58
CAF40YNL288W NSA1P53136 463 aaPredicted RBP5.2□□□□□ -1.58
CAF40YNL288W RNH201P53942 307 aa5.2□□□□□ -1.58
CAF40YNL288W YNL046WP53956 172 aa5.2□□□□□ -1.58
CAF40YNL288W NRG1Q03125 231 aa5.2□□□□□ -1.58
CAF40YNL288W GMC1Q04399 608 aa5.2□□□□□ -1.58
CAF40YNL288W SSK1Q07084 712 aa5.2□□□□□ -1.58
CAF40YNL288W HEM25Q07534 307 aa5.2□□□□□ -1.58
CAF40YNL288W DCP1Q12517 231 aaPredicted RBP5.2□□□□□ -1.58
CAF40YNL288W FSH3Q99369 266 aa5.2□□□□□ -1.58
CAF40YNL288W SEC16P48415 2195 aaKnown RBP5.19□□□□□ -1.58
CAF40YNL288W YLR415CO13578 112 aa5.19□□□□□ -1.58
CAF40YNL288W SAG1P20840 650 aa5.19□□□□□ -1.58
CAF40YNL288W HXT2P23585 541 aa5.19□□□□□ -1.58
CAF40YNL288W HOM6P31116 359 aaKnown RBP5.19□□□□□ -1.58
CAF40YNL288W TCM62P38228 572 aaKnown RBP5.19□□□□□ -1.58
CAF40YNL288W ECM14P38836 430 aa5.19□□□□□ -1.58
CAF40YNL288W YER121WP40076 114 aa5.19□□□□□ -1.58
CAF40YNL288W SYS1P41544 203 aa5.19□□□□□ -1.58
CAF40YNL288W BUD8P41698 603 aa5.19□□□□□ -1.58
CAF40YNL288W PHB2P50085 310 aa5.19□□□□□ -1.58
CAF40YNL288W YGR054WP53235 642 aaKnown RBP5.19□□□□□ -1.58
CAF40YNL288W TIM44Q01852 431 aa5.19□□□□□ -1.58
CAF40YNL288W CTF19Q02732 369 aa5.19□□□□□ -1.58
CAF40YNL288W YDR248CQ03786 193 aa5.19□□□□□ -1.58
CAF40YNL288W YTH1Q06102 208 aaPredicted RBP5.19□□□□□ -1.58
CAF40YNL288W RGC1Q06108 1083 aaKnown RBP5.19□□□□□ -1.58
CAF40YNL288W MRPL35Q06678 367 aa5.19□□□□□ -1.58
CAF40YNL288W ATG41Q12048 136 aa5.19□□□□□ -1.58
CAF40YNL288W IES3Q12345 250 aa5.19□□□□□ -1.58
CAF40YNL288W MSI1P13712 422 aa5.18□□□□□ -1.58
CAF40YNL288W YCL042WP25572 119 aa5.18□□□□□ -1.58
CAF40YNL288W MIA40P36046 403 aa5.18□□□□□ -1.58
CAF40YNL288W YHL044WP38727 235 aa5.18□□□□□ -1.58
CAF40YNL288W YND1P40009 630 aa5.18□□□□□ -1.58
CAF40YNL288W FCY21P40039 528 aa5.18□□□□□ -1.58
CAF40YNL288W YPL067CQ02754 198 aa5.18□□□□□ -1.58
CAF40YNL288W PIN3Q06449 215 aa5.18□□□□□ -1.58
CAF40YNL288W NGL1Q08213 363 aaKnown RBP5.18□□□□□ -1.58
CAF40YNL288W PEX27Q08580 376 aa5.18□□□□□ -1.58
CAF40YNL288W TDH2P00358 332 aaKnown RBP5.17□□□□□ -1.58
CAF40YNL288W CDC28P00546 298 aaKnown RBP5.17□□□□□ -1.58
CAF40YNL288W CHO1P08456 276 aa5.17□□□□□ -1.58
CAF40YNL288W PET18P25362 215 aa5.17□□□□□ -1.58
CAF40YNL288W RFA3P26755 122 aaKnown RBP5.17□□□□□ -1.58
CAF40YNL288W ZUO1P32527 433 aaKnown RBP5.17□□□□□ -1.58
CAF40YNL288W SEC66P33754 206 aa5.17□□□□□ -1.58
CAF40YNL288W MRPL36P36531 177 aa5.17□□□□□ -1.58
CAF40YNL288W NAT2P37293 288 aa5.17□□□□□ -1.58
CAF40YNL288W UMP1P38293 148 aa5.17□□□□□ -1.58
CAF40YNL288W SER2P42941 309 aa5.17□□□□□ -1.58
CAF40YNL288W SSN8P47821 323 aa5.17□□□□□ -1.58
CAF40YNL288W SBH2P52871 88 aa5.17□□□□□ -1.58
CAF40YNL288W ERV29P53337 310 aa5.17□□□□□ -1.58
CAF40YNL288W HNT1Q04344 158 aaKnown RBP5.17□□□□□ -1.58
CAF40YNL288W YMR254CQ04838 102 aa5.17□□□□□ -1.58
CAF40YNL288W YLR283WQ05867 314 aa5.17□□□□□ -1.58
CAF40YNL288W TPO3Q06451 622 aa5.17□□□□□ -1.58
CAF40YNL288W GRC3Q07845 632 aa5.17□□□□□ -1.58
CAF40YNL288W TMC1Q08422 150 aaPredicted RBP5.17□□□□□ -1.58
CAF40YNL288W YOR283WQ12040 230 aaKnown RBP5.17□□□□□ -1.58
CAF40YNL288W HUT1Q12520 339 aa5.17□□□□□ -1.58
CAF40YNL288W Q0297Q9ZZV8 51 aa5.17□□□□□ -1.58
CAF40YNL288W PEX4P29340 183 aa5.16□□□□□ -1.58
CAF40YNL288W YOX1P34161 385 aa5.16□□□□□ -1.58
CAF40YNL288W HTD2P38790 280 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms