RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W USB1Q12208 290 aaKnown RBP5.14□□□□□ -1.59
ATG4YNL223W PET20Q99373 253 aa5.14□□□□□ -1.59
ATG4YNL223W BLM10P43583 2143 aa5.14□□□□□ -1.59
ATG4YNL223W CDC28P00546 298 aaKnown RBP5.13□□□□□ -1.59
ATG4YNL223W IFM1P25038 676 aa5.13□□□□□ -1.59
ATG4YNL223W ACB1P31787 87 aa5.13□□□□□ -1.59
ATG4YNL223W PAN3P36102 679 aaPredicted RBP5.13□□□□□ -1.59
ATG4YNL223W YER084WP40057 128 aa5.13□□□□□ -1.59
ATG4YNL223W GPP1P41277 250 aaKnown RBP5.13□□□□□ -1.59
ATG4YNL223W YGR210CP42942 411 aa5.13□□□□□ -1.59
ATG4YNL223W SKP1P52286 194 aa5.13□□□□□ -1.59
ATG4YNL223W YGL260WP53056 76 aa5.13□□□□□ -1.59
ATG4YNL223W SMX3P54999 86 aaPredicted RBP5.13□□□□□ -1.59
ATG4YNL223W YML018CQ03730 393 aa5.13□□□□□ -1.59
ATG4YNL223W YDR391CQ04170 232 aa5.13□□□□□ -1.59
ATG4YNL223W YLR224WQ05947 369 aa5.13□□□□□ -1.59
ATG4YNL223W HUT1Q12520 339 aa5.13□□□□□ -1.59
ATG4YNL223W YBR298C-AQ8TGK4 73 aa5.13□□□□□ -1.59
ATG4YNL223W RPS31P05759 152 aaKnown RBP5.13□□□□□ -1.59
ATG4YNL223W ARO3P14843 370 aaKnown RBP5.13□□□□□ -1.59
ATG4YNL223W TRR1P29509 319 aaKnown RBP5.13□□□□□ -1.59
ATG4YNL223W DEG1P31115 442 aaKnown RBP5.13□□□□□ -1.59
ATG4YNL223W REC114P32841 428 aa5.13□□□□□ -1.59
ATG4YNL223W GWT1P47026 490 aa5.13□□□□□ -1.59
ATG4YNL223W ECM27P47144 725 aa5.13□□□□□ -1.59
ATG4YNL223W UFD1P53044 361 aa5.13□□□□□ -1.59
ATG4YNL223W SUR7P54003 302 aa5.13□□□□□ -1.59
ATG4YNL223W YDR248CQ03786 193 aa5.13□□□□□ -1.59
ATG4YNL223W RFU1Q08003 200 aa5.13□□□□□ -1.59
ATG4YNL223W FOL3Q12676 427 aaPredicted RBP5.13□□□□□ -1.59
ATG4YNL223W SEC16P48415 2195 aaKnown RBP5.12□□□□□ -1.59
ATG4YNL223W HEM4P06174 275 aa5.12□□□□□ -1.59
ATG4YNL223W SAG1P20840 650 aa5.12□□□□□ -1.59
ATG4YNL223W PEX4P29340 183 aa5.12□□□□□ -1.59
ATG4YNL223W ERG3P32353 365 aa5.12□□□□□ -1.59
ATG4YNL223W MCH2P36032 473 aa5.12□□□□□ -1.59
ATG4YNL223W POP8P38208 133 aa5.12□□□□□ -1.59
ATG4YNL223W GEP4P38812 185 aa5.12□□□□□ -1.59
ATG4YNL223W ARO9P38840 513 aaPredicted RBP5.12□□□□□ -1.59
ATG4YNL223W AIM46P38885 310 aa5.12□□□□□ -1.59
ATG4YNL223W PHM8P40025 321 aa5.12□□□□□ -1.59
ATG4YNL223W XBP1P40489 647 aa5.12□□□□□ -1.59
ATG4YNL223W OST1P41543 476 aaKnown RBP5.12□□□□□ -1.59
ATG4YNL223W GNA1P43577 159 aaPredicted RBP5.12□□□□□ -1.59
ATG4YNL223W NRG1Q03125 231 aa5.12□□□□□ -1.59
ATG4YNL223W PRM15Q03262 622 aa5.12□□□□□ -1.59
ATG4YNL223W YDL218WQ07629 317 aa5.12□□□□□ -1.59
ATG4YNL223W FIT3Q08907 204 aa5.12□□□□□ -1.59
ATG4YNL223W NCE102Q12207 173 aaRIP-Chip data5.12□□□□□ -1.59not detected
ATG4YNL223W RTR2Q12378 196 aa5.12□□□□□ -1.59
ATG4YNL223W YGL194C-AQ2V2P6 80 aa5.12□□□□□ -1.59
ATG4YNL223W SUA5P32579 426 aa5.11□□□□□ -1.59
ATG4YNL223W FIG1P38224 298 aa5.11□□□□□ -1.59
ATG4YNL223W ARC40P38328 384 aaKnown RBP5.11□□□□□ -1.59
ATG4YNL223W SSN8P47821 323 aa5.11□□□□□ -1.59
ATG4YNL223W NIF3P53081 288 aa5.11□□□□□ -1.59
ATG4YNL223W YIP5P53108 310 aa5.11□□□□□ -1.59
ATG4YNL223W ALG9P53868 555 aaKnown RBP5.11□□□□□ -1.59
ATG4YNL223W ISU1Q03020 165 aa5.11□□□□□ -1.59
ATG4YNL223W FMP16Q12497 93 aa5.11□□□□□ -1.59
ATG4YNL223W PRM4Q12498 284 aa5.11□□□□□ -1.59
ATG4YNL223W YBR056W-AI2HB52 66 aa5.1□□□□□ -1.59
ATG4YNL223W YLL053CP0CD98 152 aa5.1□□□□□ -1.59
ATG4YNL223W MSI1P13712 422 aa5.1□□□□□ -1.59
ATG4YNL223W YCR061WP25639 631 aa5.1□□□□□ -1.59
ATG4YNL223W YPC1P38298 316 aa5.1□□□□□ -1.59
ATG4YNL223W YBR197CP38306 217 aa5.1□□□□□ -1.59
ATG4YNL223W BFR1P38934 470 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
ATG4YNL223W FLX1P40464 311 aa5.1□□□□□ -1.59
ATG4YNL223W SNX4P47057 423 aa5.1□□□□□ -1.59
ATG4YNL223W YJR011CP47086 261 aaPredicted RBP5.1□□□□□ -1.59
ATG4YNL223W SIP18P50263 79 aa5.1□□□□□ -1.59
ATG4YNL223W SRP1Q02821 542 aaKnown RBP5.1□□□□□ -1.59
ATG4YNL223W HAS1Q03532 505 aaKnown RBP5.1□□□□□ -1.59
ATG4YNL223W DLT1Q04216 342 aa5.1□□□□□ -1.59
ATG4YNL223W API2Q04413 109 aa5.1□□□□□ -1.59
ATG4YNL223W YOR186WQ08560 144 aa5.1□□□□□ -1.59
ATG4YNL223W RRS1Q08746 203 aaKnown RBP5.1□□□□□ -1.59
ATG4YNL223W SCP1Q08873 200 aa5.1□□□□□ -1.59
ATG4YNL223W FEX2Q08991 375 aa5.1□□□□□ -1.59
ATG4YNL223W TPI1P00942 248 aaKnown RBP5.09□□□□□ -1.59
ATG4YNL223W REP2P03872 296 aa5.09□□□□□ -1.59
ATG4YNL223W GAL1P04385 528 aa5.09□□□□□ -1.59
ATG4YNL223W MET3P08536 511 aa5.09□□□□□ -1.59
ATG4YNL223W RPL35AP0CX84 120 aaKnown RBP5.09□□□□□ -1.59
ATG4YNL223W RPL35BP0CX85 120 aaKnown RBP5.09□□□□□ -1.59
ATG4YNL223W MIR1P23641 311 aaKnown RBP5.09□□□□□ -1.59
ATG4YNL223W GLC7P32598 312 aaKnown RBP5.09□□□□□ -1.59
ATG4YNL223W FAT1P38225 669 aa5.09□□□□□ -1.59
ATG4YNL223W VMA7P39111 118 aa5.09□□□□□ -1.59
ATG4YNL223W SEN34P39707 275 aa5.09□□□□□ -1.59
ATG4YNL223W PTI1P39927 425 aaPredicted RBP5.09□□□□□ -1.59
ATG4YNL223W YER079WP40052 210 aaKnown RBP5.09□□□□□ -1.59
ATG4YNL223W YIL029CP40538 142 aa5.09□□□□□ -1.59
ATG4YNL223W UBP8P50102 471 aa5.09□□□□□ -1.59
ATG4YNL223W YPL077CQ02831 240 aa5.09□□□□□ -1.59
ATG4YNL223W CAB5Q03941 241 aa5.09□□□□□ -1.59
ATG4YNL223W RTT103Q05543 409 aa5.09□□□□□ -1.59
ATG4YNL223W YPR098CQ06089 161 aa5.09□□□□□ -1.59
ATG4YNL223W BBP1Q12365 385 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms