RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C CPR4P25334 318 aa2.64□□□□□ -1.99
SSN8YNL025C AHC2P25649 128 aa2.64□□□□□ -1.99
SSN8YNL025C URA10P30402 227 aa2.64□□□□□ -1.99
SSN8YNL025C CSG2P35206 410 aa2.64□□□□□ -1.99
SSN8YNL025C MED6P38782 295 aa2.64□□□□□ -1.99
SSN8YNL025C VMA7P39111 118 aa2.64□□□□□ -1.99
SSN8YNL025C YIL029CP40538 142 aa2.64□□□□□ -1.99
SSN8YNL025C GWT1P47026 490 aa2.64□□□□□ -1.99
SSN8YNL025C ILM1P47155 203 aa2.64□□□□□ -1.99
SSN8YNL025C YGL034CP53186 121 aa2.64□□□□□ -1.99
SSN8YNL025C SYF2P53277 215 aaPredicted RBP2.64□□□□□ -1.99
SSN8YNL025C NRM1P53718 249 aa2.64□□□□□ -1.99
SSN8YNL025C APS2Q00381 147 aa2.64□□□□□ -1.99
SSN8YNL025C RRP40Q08285 240 aaKnown RBP2.64□□□□□ -1.99
SSN8YNL025C FRE8Q12209 686 aa2.64□□□□□ -1.99
SSN8YNL025C YLR046CQ12253 270 aa2.64□□□□□ -1.99
SSN8YNL025C EAF3Q12432 401 aa2.64□□□□□ -1.99
SSN8YNL025C MDS3P53094 1487 aa2.64□□□□□ -1.99
SSN8YNL025C IPP1P00817 287 aaKnown RBP2.63□□□□□ -1.99
SSN8YNL025C RPS18AP0CX55 146 aaKnown RBP2.63□□□□□ -1.99
SSN8YNL025C RPS18BP0CX56 146 aaPredicted RBP2.63□□□□□ -1.99
SSN8YNL025C SPS100P13130 326 aa2.63□□□□□ -1.99
SSN8YNL025C MSI1P13712 422 aa2.63□□□□□ -1.99
SSN8YNL025C NMT1P14743 455 aa2.63□□□□□ -1.99
SSN8YNL025C SCL1P21243 252 aaKnown RBP2.63□□□□□ -1.99
SSN8YNL025C SCO1P23833 295 aa2.63□□□□□ -1.99
SSN8YNL025C YCR023CP25351 611 aa2.63□□□□□ -1.99
SSN8YNL025C ATG22P25568 528 aa2.63□□□□□ -1.99
SSN8YNL025C PEX34P25584 144 aa2.63□□□□□ -1.99
SSN8YNL025C PHA2P32452 334 aa2.63□□□□□ -1.99
SSN8YNL025C APS1P35181 156 aa2.63□□□□□ -1.99
SSN8YNL025C TVP38P36164 337 aa2.63□□□□□ -1.99
SSN8YNL025C FRM2P37261 193 aa2.63□□□□□ -1.99
SSN8YNL025C HEK2P38199 381 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99 RIP-Chip
SSN8YNL025C ATG12P38316 186 aa2.63□□□□□ -1.99
SSN8YNL025C ARN2P38724 620 aa2.63□□□□□ -1.99
SSN8YNL025C MTC6P38849 526 aa2.63□□□□□ -1.99
SSN8YNL025C HEM14P40012 539 aa2.63□□□□□ -1.99
SSN8YNL025C SER33P40510 469 aa2.63□□□□□ -1.99
SSN8YNL025C BUD13P46947 266 aaPredicted RBP2.63□□□□□ -1.99
SSN8YNL025C AIM25P47140 327 aa2.63□□□□□ -1.99
SSN8YNL025C COQ5P49017 307 aa2.63□□□□□ -1.99
SSN8YNL025C AVT4P50944 713 aa2.63□□□□□ -1.99
SSN8YNL025C TIM13P53299 105 aa2.63□□□□□ -1.99
SSN8YNL025C RPL15BP54780 204 aaPredicted RBP2.63□□□□□ -1.99
SSN8YNL025C HHT1P61830 136 aa2.63□□□□□ -1.99
SSN8YNL025C SCS7Q03529 384 aa2.63□□□□□ -1.99
SSN8YNL025C GPI17Q04080 534 aa2.63□□□□□ -1.99
SSN8YNL025C SHH4Q06236 168 aa2.63□□□□□ -1.99
SSN8YNL025C SNX3Q08826 162 aaKnown RBP2.63□□□□□ -1.99
SSN8YNL025C FYV7Q12247 151 aa2.63□□□□□ -1.99
SSN8YNL025C YOR214CQ12282 236 aa2.63□□□□□ -1.99
SSN8YNL025C YIR021W-AQ3E739 70 aa2.63□□□□□ -1.99
SSN8YNL025C YCR024C-BQ3E7Z8 88 aa2.63□□□□□ -1.99
SSN8YNL025C UFD4P33202 1483 aa2.63□□□□□ -1.99
SSN8YNL025C MHP1P43638 1398 aa2.62□□□□□ -1.99
SSN8YNL025C SNT2P53127 1403 aa2.62□□□□□ -1.99
SSN8YNL025C MRPS28P21771 286 aa2.62□□□□□ -1.99
SSN8YNL025C MCK1P21965 375 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C MRPL20P22354 195 aaPredicted RBP2.62□□□□□ -1.99
SSN8YNL025C RPS1BP23248 255 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C LDS1P31379 325 aa2.62□□□□□ -1.99
SSN8YNL025C AGA1P32323 725 aa2.62□□□□□ -1.99
SSN8YNL025C GSP1P32835 219 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C GSP2P32836 220 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C SRY1P36007 326 aa2.62□□□□□ -1.99
SSN8YNL025C TRM7P38238 310 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C MTC4P38335 694 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C LEU5P38702 357 aa2.62□□□□□ -1.99
SSN8YNL025C DOG2P38773 246 aa2.62□□□□□ -1.99
SSN8YNL025C DOG1P38774 246 aa2.62□□□□□ -1.99
SSN8YNL025C LSM12P38828 187 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C PAN6P40459 309 aa2.62□□□□□ -1.99
SSN8YNL025C RTS2P40962 232 aa2.62□□□□□ -1.99
SSN8YNL025C HAC1P41546 238 aa2.62□□□□□ -1.99
SSN8YNL025C EGT2P42835 1041 aa2.62□□□□□ -1.99
SSN8YNL025C MNN5P46982 586 aa2.62□□□□□ -1.99
SSN8YNL025C FLC3P53121 802 aa2.62□□□□□ -1.99
SSN8YNL025C YGL101WP53144 215 aa2.62□□□□□ -1.99
SSN8YNL025C TOS8P53147 276 aa2.62□□□□□ -1.99
SSN8YNL025C MRH4P53166 561 aa2.62□□□□□ -1.99
SSN8YNL025C YNL184CP53876 108 aa2.62□□□□□ -1.99
SSN8YNL025C TDA7P53882 636 aaPredicted RBP2.62□□□□□ -1.99
SSN8YNL025C LSM7P53905 115 aaKnown RBP2.62□□□□□ -1.99
SSN8YNL025C TRM12Q04235 462 aa2.62□□□□□ -1.99
SSN8YNL025C YDR124WQ04608 324 aa2.62□□□□□ -1.99
SSN8YNL025C YMR317WQ04893 1140 aa2.62□□□□□ -1.99
SSN8YNL025C SYC1Q08553 188 aaPredicted RBP2.62□□□□□ -1.99
SSN8YNL025C FDH1Q08911 376 aa2.62□□□□□ -1.99
SSN8YNL025C YGK3Q12222 375 aaPredicted RBP2.62□□□□□ -1.99
SSN8YNL025C TRM10Q12400 293 aa2.62□□□□□ -1.99
SSN8YNL025C MMS22Q06164 1454 aa2.62□□□□□ -1.99
SSN8YNL025C PSK1P31374 1356 aa2.61□□□□□ -1.99
SSN8YNL025C CYC3P06182 269 aa2.61□□□□□ -1.99
SSN8YNL025C SEC4P07560 215 aaKnown RBP2.61□□□□□ -1.99
SSN8YNL025C ERD2P18414 219 aa2.61□□□□□ -1.99
SSN8YNL025C SFC1P33303 322 aa2.61□□□□□ -1.99
SSN8YNL025C POP4P38336 279 aa2.61□□□□□ -1.99
SSN8YNL025C TRR2P38816 342 aa2.61□□□□□ -1.99
SSN8YNL025C PEX22P39718 180 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms