RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C SMD3P43321 101 aaKnown RBP3.21□□□□□ -1.89
CTF18YMR078C BBP1Q12365 385 aa3.21□□□□□ -1.89
CTF18YMR078C UTR5P32630 166 aa3.21□□□□□ -1.9
CTF18YMR078C OST2P46964 130 aa3.21□□□□□ -1.9
CTF18YMR078C THP2O13539 261 aaKnown RBP3.2□□□□□ -1.9
CTF18YMR078C YGP1P38616 354 aaKnown RBP3.2□□□□□ -1.9
CTF18YMR078C GCN20P43535 752 aaKnown RBP3.2□□□□□ -1.9
CTF18YMR078C FAR8Q05040 523 aa3.2□□□□□ -1.9
CTF18YMR078C RUD3Q12234 484 aaKnown RBP3.2□□□□□ -1.9
CTF18YMR078C CDC10P25342 322 aaKnown RBP3.2□□□□□ -1.9
CTF18YMR078C MIC12P38341 106 aa3.2□□□□□ -1.9
CTF18YMR078C VMA6P32366 345 aaKnown RBP3.19□□□□□ -1.9
CTF18YMR078C CUE1P38428 203 aa3.19□□□□□ -1.9
CTF18YMR078C CTR2P38865 189 aa3.19□□□□□ -1.9
CTF18YMR078C MCM22P47167 239 aa3.19□□□□□ -1.9
CTF18YMR078C COX5AP00424 153 aa3.19□□□□□ -1.9
CTF18YMR078C ERG24P32462 438 aaKnown RBP3.19□□□□□ -1.9
CTF18YMR078C YMR144WP40214 342 aaKnown RBP3.19□□□□□ -1.9
CTF18YMR078C IGO1P53897 168 aa3.19□□□□□ -1.9
CTF18YMR078C GRX3Q03835 250 aa3.19□□□□□ -1.9
CTF18YMR078C SAS5Q99314 248 aa3.19□□□□□ -1.9
CTF18YMR078C BCY1P07278 416 aaKnown RBP3.18□□□□□ -1.9
CTF18YMR078C COS8P38723 381 aa3.18□□□□□ -1.9
CTF18YMR078C RPA43P46669 326 aa3.17□□□□□ -1.9
CTF18YMR078C INM2Q05533 292 aa3.17□□□□□ -1.9
CTF18YMR078C YMR31P19955 123 aa3.17□□□□□ -1.9
CTF18YMR078C PPA2P28239 310 aa3.17□□□□□ -1.9
CTF18YMR078C SRY1P36007 326 aa3.17□□□□□ -1.9
CTF18YMR078C RIB1P38066 345 aa3.17□□□□□ -1.9
CTF18YMR078C GTR2P53290 341 aa3.17□□□□□ -1.9
CTF18YMR078C FKS1P38631 1876 aaKnown RBP3.16□□□□□ -1.9
CTF18YMR078C Q0255P03881 472 aa3.16□□□□□ -1.9
CTF18YMR078C SPT3P06844 337 aa3.16□□□□□ -1.9
CTF18YMR078C SCO1P23833 295 aa3.16□□□□□ -1.9
CTF18YMR078C RPL24BP24000 155 aaKnown RBP3.16□□□□□ -1.9
CTF18YMR078C CLB6P32943 380 aa3.16□□□□□ -1.9
CTF18YMR078C PEX17P40155 199 aa3.16□□□□□ -1.9
CTF18YMR078C SLM2P53955 656 aa3.16□□□□□ -1.9
CTF18YMR078C PBN1P25580 416 aa3.16□□□□□ -1.9
CTF18YMR078C CAT5P41735 233 aa3.16□□□□□ -1.9
CTF18YMR078C SUE1Q06524 206 aa3.16□□□□□ -1.9
CTF18YMR078C SEY1Q99287 776 aa3.16□□□□□ -1.9
CTF18YMR078C IPP1P00817 287 aaKnown RBP3.15□□□□□ -1.9
CTF18YMR078C DSF1P0CX08 502 aa3.15□□□□□ -1.9
CTF18YMR078C YNR073CP0CX09 502 aa3.15□□□□□ -1.9
CTF18YMR078C CDC123Q05791 360 aa3.15□□□□□ -1.9
CTF18YMR078C NIP7Q08962 181 aaKnown RBP3.15□□□□□ -1.9
CTF18YMR078C GIS3Q12418 502 aa3.15□□□□□ -1.9
CTF18YMR078C YKL183C-AQ3E765 70 aa3.15□□□□□ -1.9
CTF18YMR078C SIR4P11978 1358 aa3.15□□□□□ -1.91
CTF18YMR078C YHR032W-AP0C5N6 59 aa3.15□□□□□ -1.91
CTF18YMR078C CCA1P21269 546 aa3.15□□□□□ -1.91
CTF18YMR078C TCD1P38756 429 aa3.15□□□□□ -1.91
CTF18YMR078C YHR125WP38831 101 aa3.15□□□□□ -1.91
CTF18YMR078C ARC15P40518 154 aaRIP-Chip data3.15□□□□□ -1.91not detected
CTF18YMR078C MRPL49P40858 161 aaPredicted RBP3.15□□□□□ -1.91
CTF18YMR078C ALG13P53178 202 aa3.15□□□□□ -1.91
CTF18YMR078C TPO4Q12256 659 aa3.15□□□□□ -1.91
CTF18YMR078C YPT52P36018 234 aaKnown RBP3.14□□□□□ -1.91
CTF18YMR078C ERG28P40030 148 aa3.14□□□□□ -1.91
CTF18YMR078C COS6P53344 381 aa3.14□□□□□ -1.91
CTF18YMR078C SCM4P32564 187 aa3.13□□□□□ -1.91
CTF18YMR078C DSK2P48510 373 aa3.13□□□□□ -1.91
CTF18YMR078C MIC26P50087 233 aa3.13□□□□□ -1.91
CTF18YMR078C RGM1Q00453 211 aa3.13□□□□□ -1.91
CTF18YMR078C HTL1Q9URQ5 78 aa3.13□□□□□ -1.91
CTF18YMR078C YHL026CP38740 315 aa3.12□□□□□ -1.91
CTF18YMR078C RPF1P38805 295 aaKnown RBP3.12□□□□□ -1.91
CTF18YMR078C COX15P40086 486 aa3.12□□□□□ -1.91
CTF18YMR078C NSA1P53136 463 aaPredicted RBP3.12□□□□□ -1.91
CTF18YMR078C ERV29P53337 310 aa3.12□□□□□ -1.91
CTF18YMR078C NHP6BP11633 99 aaKnown RBP3.12□□□□□ -1.91
CTF18YMR078C YPL257WQ08974 193 aa3.12□□□□□ -1.91
CTF18YMR078C DOA4P32571 926 aa3.11□□□□□ -1.91
CTF18YMR078C CBT1P36038 271 aaPredicted RBP3.11□□□□□ -1.91
CTF18YMR078C RMR1P53060 241 aa3.11□□□□□ -1.91
CTF18YMR078C PGA2P53903 129 aa3.11□□□□□ -1.91
CTF18YMR078C CDC33P07260 213 aaKnown RBP3.11□□□□□ -1.91
CTF18YMR078C PRE6P40303 254 aaKnown RBP3.11□□□□□ -1.91
CTF18YMR078C SNX4P47057 423 aa3.11□□□□□ -1.91
CTF18YMR078C CDD1Q06549 142 aa3.11□□□□□ -1.91
CTF18YMR078C URA6P15700 204 aa3.1□□□□□ -1.91
CTF18YMR078C PRP18P33411 251 aaPredicted RBP3.1□□□□□ -1.91
CTF18YMR078C HAM1P47119 197 aaKnown RBP3.1□□□□□ -1.91
CTF18YMR078C YBR121C-AP0C5L4 52 aa3.09□□□□□ -1.91
CTF18YMR078C COQ1P18900 473 aa3.09□□□□□ -1.91
CTF18YMR078C YNL194CP40169 301 aa3.09□□□□□ -1.91
CTF18YMR078C DCN1Q12395 269 aa3.09□□□□□ -1.91
CTF18YMR078C ECM33P38248 429 aaKnown RBP3.09□□□□□ -1.91
CTF18YMR078C FIS1P40515 155 aa3.09□□□□□ -1.91
CTF18YMR078C YRB1P41920 201 aaKnown RBP3.09□□□□□ -1.91
CTF18YMR078C RAD17P48581 401 aa3.09□□□□□ -1.91
CTF18YMR078C CWC23P52868 283 aaPredicted RBP3.09□□□□□ -1.91
CTF18YMR078C CGI121Q03705 181 aaKnown RBP3.09□□□□□ -1.91
CTF18YMR078C AKR2Q12013 749 aa3.09□□□□□ -1.91
CTF18YMR078C YDR157WA0A023PZE8 133 aa3.08□□□□□ -1.92
CTF18YMR078C NTG1P31378 399 aa3.08□□□□□ -1.92
CTF18YMR078C YJR056CP47115 236 aa3.08□□□□□ -1.92
CTF18YMR078C ILM1P47155 203 aa3.08□□□□□ -1.92
CTF18YMR078C ATG39Q06159 398 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms