RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C GPG1P53130 126 aa8.51□□□□□ -1.05
POM34YLR018C TYW3P53177 273 aa8.51□□□□□ -1.05
POM34YLR018C NGL2Q03264 515 aaKnown RBP8.51□□□□□ -1.05
POM34YLR018C DLT1Q04216 342 aa8.51□□□□□ -1.05
POM34YLR018C YPR098CQ06089 161 aa8.51□□□□□ -1.05
POM34YLR018C MRL1Q06815 381 aa8.51□□□□□ -1.05
POM34YLR018C WTM2Q12206 467 aa8.51□□□□□ -1.05
POM34YLR018C AGA2P32781 87 aa8.5□□□□□ -1.05
POM34YLR018C MID1P41821 548 aa8.5□□□□□ -1.05
POM34YLR018C CRZ1P53968 678 aa8.5□□□□□ -1.05
POM34YLR018C YML018CQ03730 393 aa8.5□□□□□ -1.05
POM34YLR018C VBA1Q04301 562 aa8.5□□□□□ -1.05
POM34YLR018C YOR186WQ08560 144 aa8.5□□□□□ -1.05
POM34YLR018C YOR385WQ08909 290 aa8.5□□□□□ -1.05
POM34YLR018C AAC1P04710 309 aa8.49□□□□□ -1.05
POM34YLR018C RPS31P05759 152 aaKnown RBP8.49□□□□□ -1.05
POM34YLR018C YLL053CP0CD98 152 aa8.49□□□□□ -1.05
POM34YLR018C NAT2P37293 288 aa8.49□□□□□ -1.05
POM34YLR018C SKP1P52286 194 aa8.49□□□□□ -1.05
POM34YLR018C YNL092WP53934 400 aa8.49□□□□□ -1.05
POM34YLR018C YDC1Q02896 317 aa8.49□□□□□ -1.05
POM34YLR018C YDR248CQ03786 193 aa8.49□□□□□ -1.05
POM34YLR018C CDC39P25655 2108 aaKnown RBP8.48□□□□□ -1.05
POM34YLR018C DIT1P21623 536 aa8.48□□□□□ -1.05
POM34YLR018C FMT1P32785 401 aa8.48□□□□□ -1.05
POM34YLR018C PAN3P36102 679 aaPredicted RBP8.48□□□□□ -1.05
POM34YLR018C FAT1P38225 669 aa8.48□□□□□ -1.05
POM34YLR018C YMR144WP40214 342 aaKnown RBP8.48□□□□□ -1.05
POM34YLR018C GWT1P47026 490 aa8.48□□□□□ -1.05
POM34YLR018C YJR011CP47086 261 aaPredicted RBP8.48□□□□□ -1.05
POM34YLR018C SKO1Q02100 647 aa8.48□□□□□ -1.05
POM34YLR018C PIN3Q06449 215 aa8.48□□□□□ -1.05
POM34YLR018C PET20Q99373 253 aa8.48□□□□□ -1.05
POM34YLR018C SSA3P09435 649 aaKnown RBP8.47□□□□□ -1.05
POM34YLR018C SPS4P09937 338 aa8.47□□□□□ -1.05
POM34YLR018C SPS100P13130 326 aa8.47□□□□□ -1.05
POM34YLR018C IFM1P25038 676 aa8.47□□□□□ -1.05
POM34YLR018C ERG3P32353 365 aa8.47□□□□□ -1.05
POM34YLR018C UTP30P36144 274 aaKnown RBP8.47□□□□□ -1.05
POM34YLR018C YGP1P38616 354 aaKnown RBP8.47□□□□□ -1.05
POM34YLR018C EGT2P42835 1041 aa8.47□□□□□ -1.05
POM34YLR018C GTF1P53260 183 aaPredicted RBP8.47□□□□□ -1.05
POM34YLR018C OKP1P53298 406 aa8.47□□□□□ -1.05
POM34YLR018C GAT3Q07928 141 aa8.47□□□□□ -1.05
POM34YLR018C TRM13Q12383 476 aa8.47□□□□□ -1.05
POM34YLR018C RPL6BP05739 176 aaKnown RBP8.46□□□□□ -1.06
POM34YLR018C PET122P10355 254 aa8.46□□□□□ -1.06
POM34YLR018C CPR4P25334 318 aa8.46□□□□□ -1.06
POM34YLR018C PEX4P29340 183 aa8.46□□□□□ -1.06
POM34YLR018C PRS3P38689 320 aaKnown RBP8.46□□□□□ -1.06
POM34YLR018C ALG9P53868 555 aaKnown RBP8.46□□□□□ -1.06
POM34YLR018C LAP3Q01532 483 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
POM34YLR018C PRM15Q03262 622 aa8.46□□□□□ -1.06
POM34YLR018C SYM1Q06563 197 aa8.46□□□□□ -1.06
POM34YLR018C MPD1Q12404 318 aaKnown RBP8.46□□□□□ -1.06
POM34YLR018C URA3P03962 267 aa8.45□□□□□ -1.06
POM34YLR018C YCR101CP25607 182 aa8.45□□□□□ -1.06
POM34YLR018C IMP1P28627 190 aa8.45□□□□□ -1.06
POM34YLR018C EDS1P38073 919 aa8.45□□□□□ -1.06
POM34YLR018C RRF1P38771 230 aa8.45□□□□□ -1.06
POM34YLR018C LSM1P47017 172 aaKnown RBP8.45□□□□□ -1.06
POM34YLR018C TAF4P50105 388 aa8.45□□□□□ -1.06
POM34YLR018C NRG1Q03125 231 aa8.45□□□□□ -1.06
POM34YLR018C YMR254CQ04838 102 aa8.45□□□□□ -1.06
POM34YLR018C FCY22Q12119 530 aa8.45□□□□□ -1.06
POM34YLR018C ARG80P07249 177 aa8.44□□□□□ -1.06
POM34YLR018C RPS23AP0CX29 145 aaKnown RBP8.44□□□□□ -1.06
POM34YLR018C RPS23BP0CX30 145 aa8.44□□□□□ -1.06
POM34YLR018C YCR016WP25617 290 aaKnown RBP8.44□□□□□ -1.06
POM34YLR018C MRP17P28778 131 aa8.44□□□□□ -1.06
POM34YLR018C FLO10P36170 1169 aa8.44□□□□□ -1.06
POM34YLR018C POP8P38208 133 aa8.44□□□□□ -1.06
POM34YLR018C YBR197CP38306 217 aa8.44□□□□□ -1.06
POM34YLR018C SED1Q01589 338 aa8.44□□□□□ -1.06
POM34YLR018C YMR279CQ03263 540 aa8.44□□□□□ -1.06
POM34YLR018C YTH1Q06102 208 aaPredicted RBP8.44□□□□□ -1.06
POM34YLR018C YLR108CQ12259 485 aa8.44□□□□□ -1.06
POM34YLR018C UBA3Q99344 299 aa8.44□□□□□ -1.06
POM34YLR018C RPL43AP0CX25 92 aaKnown RBP8.43□□□□□ -1.06
POM34YLR018C RPL43BP0CX26 92 aa8.43□□□□□ -1.06
POM34YLR018C OCH1P31755 480 aa8.43□□□□□ -1.06
POM34YLR018C MTR2P34232 184 aaKnown RBP8.43□□□□□ -1.06
POM34YLR018C SWD3P38123 315 aa8.43□□□□□ -1.06
POM34YLR018C PRS2P38620 318 aaKnown RBP8.43□□□□□ -1.06
POM34YLR018C COS8P38723 381 aa8.43□□□□□ -1.06
POM34YLR018C CCS1P40202 249 aaKnown RBP8.43□□□□□ -1.06
POM34YLR018C MRX5P47007 382 aa8.43□□□□□ -1.06
POM34YLR018C SLX9P53251 210 aaPredicted RBP8.43□□□□□ -1.06
POM34YLR018C YDR114CQ04597 100 aa8.43□□□□□ -1.06
POM34YLR018C SCP1Q08873 200 aa8.43□□□□□ -1.06
POM34YLR018C FEX2Q08991 375 aa8.43□□□□□ -1.06
POM34YLR018C FRE8Q12209 686 aa8.43□□□□□ -1.06
POM34YLR018C ATG40Q99325 256 aa8.43□□□□□ -1.06
POM34YLR018C SEN2P16658 377 aa8.42□□□□□ -1.06
POM34YLR018C DAL80P26343 269 aa8.42□□□□□ -1.06
POM34YLR018C YOX1P34161 385 aa8.42□□□□□ -1.06
POM34YLR018C YKL107WP34251 309 aa8.42□□□□□ -1.06
POM34YLR018C VMA22P38784 181 aa8.42□□□□□ -1.06
POM34YLR018C ECM14P38836 430 aa8.42□□□□□ -1.06
POM34YLR018C LNP1P38878 278 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 157.5 ms