RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C PGU1P47180 361 aa1.62□□□□□ -2.15
VPS35YJL154C COG7P53195 279 aa1.62□□□□□ -2.15
VPS35YJL154C CAX4P53223 239 aa1.62□□□□□ -2.15
VPS35YJL154C NOP19P53317 196 aaPredicted RBP1.62□□□□□ -2.15
VPS35YJL154C YNR066CP53752 436 aa1.62□□□□□ -2.15
VPS35YJL154C PEX12Q04370 399 aa1.62□□□□□ -2.15
VPS35YJL154C KRE28Q04431 385 aa1.62□□□□□ -2.15
VPS35YJL154C YPR147CQ06522 304 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C YPD1Q07688 167 aa1.62□□□□□ -2.15
VPS35YJL154C CSM4Q08955 156 aa1.62□□□□□ -2.15
VPS35YJL154C YPL278CQ08990 100 aa1.62□□□□□ -2.15
VPS35YJL154C YRA1Q12159 226 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C IRA1P18963 3092 aa1.62□□□□□ -2.15
VPS35YJL154C MDN1Q12019 4910 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C THP2O13539 261 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C QCR7P00128 127 aa1.62□□□□□ -2.15
VPS35YJL154C TPI1P00942 248 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C FRS2P15625 503 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C CBF1P17106 351 aa1.62□□□□□ -2.15
VPS35YJL154C RPO26P20435 155 aa1.62□□□□□ -2.15
VPS35YJL154C ZRT3P34240 503 aa1.62□□□□□ -2.15
VPS35YJL154C CPR5P35176 225 aa1.62□□□□□ -2.15
VPS35YJL154C SRP102P36057 244 aaPredicted RBP1.62□□□□□ -2.15
VPS35YJL154C YKE4P40544 346 aa1.62□□□□□ -2.15
VPS35YJL154C YIR035CP40579 254 aa1.62□□□□□ -2.15
VPS35YJL154C UBC13P52490 153 aa1.62□□□□□ -2.15
VPS35YJL154C YGR042WP53227 271 aa1.62□□□□□ -2.15
VPS35YJL154C CPD1P53314 239 aa1.62□□□□□ -2.15
VPS35YJL154C RCF2P53721 224 aa1.62□□□□□ -2.15
VPS35YJL154C YMR244WQ04018 355 aa1.62□□□□□ -2.15
VPS35YJL154C ARO80Q04052 950 aa1.62□□□□□ -2.15
VPS35YJL154C YLR446WQ06204 433 aa1.62□□□□□ -2.15
VPS35YJL154C PRP46Q12417 451 aaPredicted RBP1.62□□□□□ -2.15
VPS35YJL154C SWI1P09547 1314 aa1.62□□□□□ -2.15
VPS35YJL154C TY4B-JP47024 1803 aa1.62□□□□□ -2.15
VPS35YJL154C SAL1D6W196 494 aa1.62□□□□□ -2.15
VPS35YJL154C STE18P18852 110 aa1.62□□□□□ -2.15
VPS35YJL154C IMP1P28627 190 aa1.62□□□□□ -2.15
VPS35YJL154C TAF14P35189 244 aa1.62□□□□□ -2.15
VPS35YJL154C CBT1P36038 271 aaPredicted RBP1.62□□□□□ -2.15
VPS35YJL154C PRS4P38063 326 aaPredicted RBP1.62□□□□□ -2.15
VPS35YJL154C BIG1P38813 335 aa1.62□□□□□ -2.15
VPS35YJL154C KRE29P40026 464 aa1.62□□□□□ -2.15
VPS35YJL154C POG1P40473 351 aa1.62□□□□□ -2.15
VPS35YJL154C CIN5P40917 295 aa1.62□□□□□ -2.15
VPS35YJL154C YNL140CP53910 189 aa1.62□□□□□ -2.15
VPS35YJL154C FYV6P53913 173 aa1.62□□□□□ -2.15
VPS35YJL154C SPP2Q02521 185 aa1.62□□□□□ -2.15
VPS35YJL154C YDL144CQ07589 356 aa1.62□□□□□ -2.15
VPS35YJL154C SEY1Q99287 776 aa1.62□□□□□ -2.15
VPS35YJL154C TY4B-HP0C2J7 1802 aa1.61□□□□□ -2.15
VPS35YJL154C QCR2P07257 368 aa1.61□□□□□ -2.15
VPS35YJL154C RRT12P25381 491 aa1.61□□□□□ -2.15
VPS35YJL154C VMA6P32366 345 aaKnown RBP1.61□□□□□ -2.15
VPS35YJL154C SSO1P32867 290 aa1.61□□□□□ -2.15
VPS35YJL154C EDC2P40023 145 aaPredicted RBP1.61□□□□□ -2.15
VPS35YJL154C ERG28P40030 148 aa1.61□□□□□ -2.15
VPS35YJL154C RPC17P47076 161 aa1.61□□□□□ -2.15
VPS35YJL154C CWC23P52868 283 aaPredicted RBP1.61□□□□□ -2.15
VPS35YJL154C YDR248CQ03786 193 aa1.61□□□□□ -2.15
VPS35YJL154C DXO1Q06349 442 aa1.61□□□□□ -2.15
VPS35YJL154C GPM2Q12008 311 aa1.61□□□□□ -2.15
VPS35YJL154C YDR018CQ12185 396 aa1.61□□□□□ -2.15
VPS35YJL154C ADE6P38972 1358 aaKnown RBP1.61□□□□□ -2.15
VPS35YJL154C TFS1P14306 219 aa1.61□□□□□ -2.15
VPS35YJL154C SPT4P32914 102 aaPredicted RBP1.61□□□□□ -2.15
VPS35YJL154C UTP11P34247 250 aaPredicted RBP1.61□□□□□ -2.15
VPS35YJL154C SSH1P38353 490 aaKnown RBP1.61□□□□□ -2.15
VPS35YJL154C BDH1P39714 382 aa1.61□□□□□ -2.15
VPS35YJL154C VAB2P40003 282 aa1.61□□□□□ -2.15
VPS35YJL154C GDS1P41913 522 aa1.61□□□□□ -2.15
VPS35YJL154C YJR149WP47177 404 aa1.61□□□□□ -2.15
VPS35YJL154C PRP24P49960 444 aaKnown RBP1.61□□□□□ -2.15
VPS35YJL154C SEC13Q04491 297 aaKnown RBP1.61□□□□□ -2.15
VPS35YJL154C DPP1Q05521 289 aa1.61□□□□□ -2.15
VPS35YJL154C MIM1Q08176 113 aa1.61□□□□□ -2.15
VPS35YJL154C TRM10Q12400 293 aa1.61□□□□□ -2.15
VPS35YJL154C YKL183C-AQ3E765 70 aa1.61□□□□□ -2.15
VPS35YJL154C RAD50P12753 1312 aa1.6□□□□□ -2.15
VPS35YJL154C ATP6P00854 259 aa1.6□□□□□ -2.15
VPS35YJL154C MRP1P10662 321 aaKnown RBP1.6□□□□□ -2.15
VPS35YJL154C SNA3P14359 133 aa1.6□□□□□ -2.15
VPS35YJL154C HPR1P17629 752 aaKnown RBP1.6□□□□□ -2.15
VPS35YJL154C MIC12P38341 106 aa1.6□□□□□ -2.15
VPS35YJL154C YGL204CP53089 101 aa1.6□□□□□ -2.15
VPS35YJL154C GET1P53192 235 aa1.6□□□□□ -2.15
VPS35YJL154C MRPL50P53724 139 aa1.6□□□□□ -2.15
VPS35YJL154C PEX30Q06169 523 aa1.6□□□□□ -2.15
VPS35YJL154C YOR292CQ08743 309 aa1.6□□□□□ -2.15
VPS35YJL154C YLR053CQ12026 108 aa1.6□□□□□ -2.15
VPS35YJL154C YDL211CQ12121 372 aa1.6□□□□□ -2.15
VPS35YJL154C PER33Q12144 273 aa1.6□□□□□ -2.15
VPS35YJL154C AI5_BETAQ9ZZX0 354 aa1.6□□□□□ -2.15
VPS35YJL154C YDR157WA0A023PZE8 133 aa1.6□□□□□ -2.15
VPS35YJL154C YMR316C-AI2HB70 103 aa1.6□□□□□ -2.15
VPS35YJL154C HTB1P02293 131 aaKnown RBP1.6□□□□□ -2.15
VPS35YJL154C HTB2P02294 131 aa1.6□□□□□ -2.15
VPS35YJL154C YBR121C-AP0C5L4 52 aa1.6□□□□□ -2.15
VPS35YJL154C DAL82P21705 255 aa1.6□□□□□ -2.15
VPS35YJL154C CLG1P35190 452 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms