RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C YMR254CQ04838 102 aa8.32□□□□□ -1.08
MET28YIR017C YTH1Q06102 208 aaPredicted RBP8.32□□□□□ -1.08
MET28YIR017C GAT3Q07928 141 aa8.32□□□□□ -1.08
MET28YIR017C HUT1Q12520 339 aa8.32□□□□□ -1.08
MET28YIR017C TDH2P00358 332 aaKnown RBP8.31□□□□□ -1.08
MET28YIR017C YCR101CP25607 182 aa8.31□□□□□ -1.08
MET28YIR017C RNP1P32385 249 aa8.31□□□□□ -1.08
MET28YIR017C VAM7P32912 316 aa8.31□□□□□ -1.08
MET28YIR017C YKL187CP34231 750 aa8.31□□□□□ -1.08
MET28YIR017C MRPL36P36531 177 aa8.31□□□□□ -1.08
MET28YIR017C YHR122WP38829 231 aa8.31□□□□□ -1.08
MET28YIR017C TAF4P50105 388 aa8.31□□□□□ -1.08
MET28YIR017C UFD1P53044 361 aa8.31□□□□□ -1.08
MET28YIR017C ARO8P53090 500 aaKnown RBP8.31□□□□□ -1.08
MET28YIR017C YPL067CQ02754 198 aa8.31□□□□□ -1.08
MET28YIR017C YOR186WQ08560 144 aa8.31□□□□□ -1.08
MET28YIR017C EAF3Q12432 401 aa8.31□□□□□ -1.08
MET28YIR017C FSH3Q99369 266 aa8.31□□□□□ -1.08
MET28YIR017C REP2P03872 296 aa8.3□□□□□ -1.08
MET28YIR017C RPS31P05759 152 aaKnown RBP8.3□□□□□ -1.08
MET28YIR017C MNS1P32906 549 aa8.3□□□□□ -1.08
MET28YIR017C RIB7P33312 244 aa8.3□□□□□ -1.08
MET28YIR017C GAT2P40209 560 aa8.3□□□□□ -1.08
MET28YIR017C OTU1P43558 301 aa8.3□□□□□ -1.08
MET28YIR017C TY1A-MR1Q04215 440 aa8.3□□□□□ -1.08
MET28YIR017C PHO92Q06390 306 aa8.3□□□□□ -1.08
MET28YIR017C FCY22Q12119 530 aa8.3□□□□□ -1.08
MET28YIR017C RPL3P14126 387 aaKnown RBP8.29□□□□□ -1.08
MET28YIR017C CDC23P16522 626 aa8.29□□□□□ -1.08
MET28YIR017C SHM2P37291 469 aaKnown RBP8.29□□□□□ -1.08
MET28YIR017C OSH7P38755 437 aa8.29□□□□□ -1.08
MET28YIR017C YNL046WP53956 172 aa8.29□□□□□ -1.08
MET28YIR017C GMC1Q04399 608 aa8.29□□□□□ -1.08
MET28YIR017C GRC3Q07845 632 aa8.29□□□□□ -1.08
MET28YIR017C PET122P10355 254 aa8.28□□□□□ -1.08
MET28YIR017C IFM1P25038 676 aa8.28□□□□□ -1.08
MET28YIR017C PEX4P29340 183 aa8.28□□□□□ -1.08
MET28YIR017C PRS2P38620 318 aaKnown RBP8.28□□□□□ -1.08
MET28YIR017C YHL044WP38727 235 aa8.28□□□□□ -1.08
MET28YIR017C LNP1P38878 278 aa8.28□□□□□ -1.08
MET28YIR017C YKE4P40544 346 aa8.28□□□□□ -1.08
MET28YIR017C MID1P41821 548 aa8.28□□□□□ -1.08
MET28YIR017C MRX5P47007 382 aa8.28□□□□□ -1.08
MET28YIR017C MSE1P48525 536 aa8.28□□□□□ -1.08
MET28YIR017C RPA14P50106 137 aa8.28□□□□□ -1.08
MET28YIR017C RSM27P53305 110 aa8.28□□□□□ -1.08
MET28YIR017C TY1A-DR2Q03964 440 aaKnown RBP8.28□□□□□ -1.08
MET28YIR017C SPO24Q3E752 67 aa8.28□□□□□ -1.08
MET28YIR017C SPS2P08459 502 aa8.27□□□□□ -1.09
MET28YIR017C RFA1P22336 621 aaKnown RBP8.27□□□□□ -1.09
MET28YIR017C ERG3P32353 365 aa8.27□□□□□ -1.09
MET28YIR017C RTG1P32607 177 aa8.27□□□□□ -1.09
MET28YIR017C YOX1P34161 385 aa8.27□□□□□ -1.09
MET28YIR017C YBR242WP38331 238 aa8.27□□□□□ -1.09
MET28YIR017C PRM15Q03262 622 aa8.27□□□□□ -1.09
MET28YIR017C WHI5Q12416 295 aa8.27□□□□□ -1.09
MET28YIR017C RDI1Q12434 202 aa8.27□□□□□ -1.09
MET28YIR017C ATG40Q99325 256 aa8.27□□□□□ -1.09
MET28YIR017C RPL39P04650 51 aa8.26□□□□□ -1.09
MET28YIR017C IMP1P28627 190 aa8.26□□□□□ -1.09
MET28YIR017C MRPL3P36516 390 aa8.26□□□□□ -1.09
MET28YIR017C RMD6P39975 231 aa8.26□□□□□ -1.09
MET28YIR017C CCS1P40202 249 aaKnown RBP8.26□□□□□ -1.09
MET28YIR017C LSM1P47017 172 aaKnown RBP8.26□□□□□ -1.09
MET28YIR017C BNA2P47125 453 aa8.26□□□□□ -1.09
MET28YIR017C SBH2P52871 88 aa8.26□□□□□ -1.09
MET28YIR017C ALG9P53868 555 aaKnown RBP8.26□□□□□ -1.09
MET28YIR017C ARG5,6Q01217 863 aa8.26□□□□□ -1.09
MET28YIR017C YML018CQ03730 393 aa8.26□□□□□ -1.09
MET28YIR017C UPS1Q05776 175 aa8.26□□□□□ -1.09
MET28YIR017C LIP2Q06005 328 aa8.26□□□□□ -1.09
MET28YIR017C YLR108CQ12259 485 aa8.26□□□□□ -1.09
MET28YIR017C AAC1P04710 309 aa8.25□□□□□ -1.09
MET28YIR017C RNA14P25298 677 aaKnown RBP8.25□□□□□ -1.09
MET28YIR017C YCP4P25349 247 aaKnown RBP8.25□□□□□ -1.09
MET28YIR017C GWT1P47026 490 aa8.25□□□□□ -1.09
MET28YIR017C YJR011CP47086 261 aaPredicted RBP8.25□□□□□ -1.09
MET28YIR017C TMC1Q08422 150 aaPredicted RBP8.25□□□□□ -1.09
MET28YIR017C YOR385WQ08909 290 aa8.25□□□□□ -1.09
MET28YIR017C MPD1Q12404 318 aaKnown RBP8.25□□□□□ -1.09
MET28YIR017C ACH1P32316 526 aa8.24□□□□□ -1.09
MET28YIR017C MRPL27P36526 146 aaPredicted RBP8.24□□□□□ -1.09
MET28YIR017C SGN1P40561 250 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
MET28YIR017C HNT2P49775 206 aa8.24□□□□□ -1.09
MET28YIR017C GPG1P53130 126 aa8.24□□□□□ -1.09
MET28YIR017C TEX1P53851 422 aaKnown RBP8.24□□□□□ -1.09
MET28YIR017C YLL053CP0CD98 152 aa8.23□□□□□ -1.09
MET28YIR017C DIT1P21623 536 aa8.23□□□□□ -1.09
MET28YIR017C FIG1P38224 298 aa8.23□□□□□ -1.09
MET28YIR017C YBR197CP38306 217 aa8.23□□□□□ -1.09
MET28YIR017C GLR1P41921 483 aaKnown RBP8.23□□□□□ -1.09
MET28YIR017C GON7P46984 123 aa8.23□□□□□ -1.09
MET28YIR017C GTF1P53260 183 aaPredicted RBP8.23□□□□□ -1.09
MET28YIR017C PET20Q99373 253 aa8.23□□□□□ -1.09
MET28YIR017C URA3P03962 267 aa8.22□□□□□ -1.09
MET28YIR017C RAD52P06778 471 aaKnown RBP8.22□□□□□ -1.09
MET28YIR017C OCH1P31755 480 aa8.22□□□□□ -1.09
MET28YIR017C NTC20P38302 140 aaPredicted RBP8.22□□□□□ -1.09
MET28YIR017C AIM46P38885 310 aa8.22□□□□□ -1.09
MET28YIR017C SLM1P40485 686 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 105.9 ms