RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	ALG11	P53954	548 aa	Known RBP	1.41	□□□□□ -2.18
SPO11	YHL022C	ERV25	P54837	211 aa	Known RBP	1.41	□□□□□ -2.18
SPO11	YHL022C	SPG4	Q04438	115 aa		1.41	□□□□□ -2.18
SPO11	YHL022C	ADH6	Q04894	360 aa	Known RBP	1.41	□□□□□ -2.18
SPO11	YHL022C	RPL24A	P04449	155 aa	Known RBP	1.4	□□□□□ -2.19
SPO11	YHL022C	FPR1	P20081	114 aa	Known RBP	1.4	□□□□□ -2.19
SPO11	YHL022C	YPR098C	Q06089	161 aa		1.4	□□□□□ -2.19
SPO11	YHL022C	ARR2	Q06597	130 aa		1.4	□□□□□ -2.19
SPO11	YHL022C	YPR172W	Q06608	200 aa		1.4	□□□□□ -2.19
SPO11	YHL022C	UBR2	Q07963	1872 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	MRP1	P10662	321 aa	Known RBP	1.39	□□□□□ -2.19
SPO11	YHL022C	JEN1	P36035	616 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	MRPL39	P36533	70 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	MRX3	P38172	270 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	YHR180W	P38868	163 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	SMB1	P40018	196 aa	Known RBP	1.39	□□□□□ -2.19
SPO11	YHL022C	YJR056C	P47115	236 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	YNR062C	P53748	327 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	YOR186W	Q08560	144 aa		1.39	□□□□□ -2.19
SPO11	YHL022C	HOM6	P31116	359 aa	Known RBP	1.38	□□□□□ -2.19
SPO11	YHL022C	YPT52	P36018	234 aa	Known RBP	1.38	□□□□□ -2.19
SPO11	YHL022C	GOS1	P38736	223 aa		1.38	□□□□□ -2.19
SPO11	YHL022C	RPL13B	P40212	199 aa	Known RBP	1.38	□□□□□ -2.19
SPO11	YHL022C	YIL001W	P40560	513 aa		1.38	□□□□□ -2.19
SPO11	YHL022C	YAR1	P46683	200 aa		1.38	□□□□□ -2.19
SPO11	YHL022C	EMC2	P47133	292 aa	Known RBP	1.38	□□□□□ -2.19
SPO11	YHL022C	COX20	Q04935	205 aa		1.38	□□□□□ -2.19
SPO11	YHL022C	YLR162W	Q06235	118 aa		1.38	□□□□□ -2.19
SPO11	YHL022C	CSI2	Q08054	341 aa		1.38	□□□□□ -2.19
SPO11	YHL022C	YPL257W	Q08974	193 aa		1.38	□□□□□ -2.19
SPO11	YHL022C	RPL13A	Q12690	199 aa	Predicted RBP	1.38	□□□□□ -2.19
SPO11	YHL022C	RPL2A	P0CX45	254 aa	Known RBP	1.37	□□□□□ -2.19
SPO11	YHL022C	RPL2B	P0CX46	254 aa	Known RBP	1.37	□□□□□ -2.19
SPO11	YHL022C	SGE1	P33335	543 aa		1.37	□□□□□ -2.19
SPO11	YHL022C	AGE2	P40529	298 aa		1.37	□□□□□ -2.19
SPO11	YHL022C	TOS8	P53147	276 aa		1.37	□□□□□ -2.19
SPO11	YHL022C	RRS1	Q08746	203 aa	Known RBP	1.37	□□□□□ -2.19
SPO11	YHL022C	DAL82	P21705	255 aa		1.36	□□□□□ -2.19
SPO11	YHL022C	YBR096W	P38256	230 aa		1.36	□□□□□ -2.19
SPO11	YHL022C	RRF1	P38771	230 aa		1.36	□□□□□ -2.19
SPO11	YHL022C	JHD2	P47156	728 aa	Predicted RBP	1.36	□□□□□ -2.19
SPO11	YHL022C	YDR209C	Q03480	137 aa		1.36	□□□□□ -2.19
SPO11	YHL022C	SML1	Q04964	104 aa		1.36	□□□□□ -2.19
SPO11	YHL022C	ATG39	Q06159	398 aa		1.36	□□□□□ -2.19
SPO11	YHL022C	HEM25	Q07534	307 aa		1.36	□□□□□ -2.19
SPO11	YHL022C	RIO1	Q12196	484 aa	Known RBP	1.36	□□□□□ -2.19
SPO11	YHL022C	PET9	P18239	318 aa	Known RBP	1.35	□□□□□ -2.19
SPO11	YHL022C	YAR068W	P39564	161 aa		1.35	□□□□□ -2.19
SPO11	YHL022C	HAM1	P47119	197 aa	Known RBP	1.35	□□□□□ -2.19
SPO11	YHL022C	USE1	P53146	245 aa		1.35	□□□□□ -2.19
SPO11	YHL022C	SNZ2	P53824	298 aa		1.35	□□□□□ -2.19
SPO11	YHL022C	TPO4	Q12256	659 aa		1.35	□□□□□ -2.19
SPO11	YHL022C	HTL1	Q9URQ5	78 aa		1.35	□□□□□ -2.19
SPO11	YHL022C	RNA15	P25299	296 aa	Predicted RBP	1.34	□□□□□ -2.19
SPO11	YHL022C	UPS2	P35200	230 aa		1.34	□□□□□ -2.19
SPO11	YHL022C	RSM25	P40496	264 aa		1.34	□□□□□ -2.19
SPO11	YHL022C	YNL046W	P53956	172 aa		1.34	□□□□□ -2.19
SPO11	YHL022C	IPP1	P00817	287 aa	Known RBP	1.33	□□□□□ -2.2
SPO11	YHL022C	RPA43	P46669	326 aa		1.33	□□□□□ -2.2
SPO11	YHL022C	GLG2	P47011	380 aa		1.33	□□□□□ -2.2
SPO11	YHL022C	YOR020W-A	Q3E824	90 aa		1.33	□□□□□ -2.2
SPO11	YHL022C	RSR1	P13856	272 aa		1.32	□□□□□ -2.2
SPO11	YHL022C	POL30	P15873	258 aa	Known RBP	1.32	□□□□□ -2.2
SPO11	YHL022C	RPF1	P38805	295 aa	Known RBP	1.32	□□□□□ -2.2
SPO11	YHL022C	RPL33B	P41056	107 aa	Known RBP	1.32	□□□□□ -2.2
SPO11	YHL022C	RHO3	Q00245	231 aa	Known RBP	1.32	□□□□□ -2.2
SPO11	YHL022C	CSM4	Q08955	156 aa		1.32	□□□□□ -2.2
SPO11	YHL022C	YCT1	Q12235	531 aa		1.32	□□□□□ -2.2
SPO11	YHL022C	FLO9	P39712	1322 aa		1.32	□□□□□ -2.2
SPO11	YHL022C	ERV29	P53337	310 aa		1.31	□□□□□ -2.2
SPO11	YHL022C	NIP7	Q08962	181 aa	Known RBP	1.31	□□□□□ -2.2
SPO11	YHL022C	ERD2	P18414	219 aa		1.3	□□□□□ -2.2
SPO11	YHL022C	MEI4	P29467	408 aa		1.3	□□□□□ -2.2
SPO11	YHL022C	MRPL37	P36532	105 aa		1.3	□□□□□ -2.2
SPO11	YHL022C	ECM33	P38248	429 aa	Known RBP	1.3	□□□□□ -2.2
SPO11	YHL022C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	1.3	□□□□□ -2.2	not detected
SPO11	YHL022C	MEP1	P40260	492 aa		1.3	□□□□□ -2.2
SPO11	YHL022C	SNU23	Q12368	194 aa	Predicted RBP	1.3	□□□□□ -2.2
SPO11	YHL022C	GPA2	P10823	449 aa		1.29	□□□□□ -2.2
SPO11	YHL022C	ILM1	P47155	203 aa		1.29	□□□□□ -2.2
SPO11	YHL022C	TCD1	P38756	429 aa		1.28	□□□□□ -2.2
SPO11	YHL022C	YHR127W	P38833	243 aa	Known RBP	1.28	□□□□□ -2.2
SPO11	YHL022C	ICE2	P40499	491 aa		1.28	□□□□□ -2.2
SPO11	YHL022C	TIR3	P40552	269 aa		1.28	□□□□□ -2.2
SPO11	YHL022C	SEI1	Q06058	285 aa		1.28	□□□□□ -2.2
SPO11	YHL022C	SDO1	Q07953	250 aa	Known RBP	1.28	□□□□□ -2.2
SPO11	YHL022C	BIG1	P38813	335 aa		1.27	□□□□□ -2.21
SPO11	YHL022C	MSA1	Q08471	629 aa		1.27	□□□□□ -2.21
SPO11	YHL022C	CDC8	P00572	216 aa		1.26	□□□□□ -2.21
SPO11	YHL022C	FCY2	P17064	533 aa		1.26	□□□□□ -2.21
SPO11	YHL022C	FZF1	P32805	299 aa		1.26	□□□□□ -2.21
SPO11	YHL022C	CAT5	P41735	233 aa		1.26	□□□□□ -2.21
SPO11	YHL022C	NUP57	P48837	541 aa		1.26	□□□□□ -2.21
SPO11	YHL022C	BOL2	P53082	120 aa		1.26	□□□□□ -2.21
SPO11	YHL022C	MPP6	P53725	186 aa	Predicted RBP	1.26	□□□□□ -2.21
SPO11	YHL022C	SSQ1	Q05931	657 aa	Predicted RBP	1.26	□□□□□ -2.21
SPO11	YHL022C	CYR1	P08678	2026 aa	Known RBP	1.26	□□□□□ -2.21
SPO11	YHL022C	MSF1	P08425	469 aa		1.25	□□□□□ -2.21
SPO11	YHL022C	RPS5	P26783	225 aa	Known RBP	1.25	□□□□□ -2.21
SPO11	YHL022C	TMA19	P35691	167 aa	Known RBP	1.25	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 1099.2 ms