RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	YJR149W	P47177	404 aa		0.86	□□□□□ -2.27
SCW11	YGL028C	GTR2	P53290	341 aa		0.86	□□□□□ -2.27
SCW11	YGL028C	YLR283W	Q05867	314 aa		0.86	□□□□□ -2.27
SCW11	YGL028C	MSA1	Q08471	629 aa		0.86	□□□□□ -2.27
SCW11	YGL028C	RRS1	Q08746	203 aa	Known RBP	0.86	□□□□□ -2.27
SCW11	YGL028C	BBP1	Q12365	385 aa		0.86	□□□□□ -2.27
SCW11	YGL028C	SIR4	P11978	1358 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	CYR1	P08678	2026 aa	Known RBP	0.85	□□□□□ -2.27
SCW11	YGL028C	YHR139C-A	O13536	103 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	YHR032W-A	P0C5N6	59 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	SNA3	P14359	133 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	ERG24	P32462	438 aa	Known RBP	0.85	□□□□□ -2.27
SCW11	YGL028C	MRPL39	P36533	70 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	LDB7	P38210	180 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	YHR127W	P38833	243 aa	Known RBP	0.85	□□□□□ -2.27
SCW11	YGL028C	FMC1	P40491	155 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	NUP84	P52891	726 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	TOS8	P53147	276 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	DAD3	P69850	94 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	RHO3	Q00245	231 aa	Known RBP	0.85	□□□□□ -2.27
SCW11	YGL028C	PET117	Q02771	107 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	INM2	Q05533	292 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	AKR2	Q12013	749 aa		0.85	□□□□□ -2.27
SCW11	YGL028C	SNU23	Q12368	194 aa	Predicted RBP	0.85	□□□□□ -2.27
SCW11	YGL028C	GRX2	P17695	143 aa	Known RBP	0.84	□□□□□ -2.28
SCW11	YGL028C	DOA4	P32571	926 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	YPT52	P36018	234 aa	Known RBP	0.84	□□□□□ -2.28
SCW11	YGL028C	RPF1	P38805	295 aa	Known RBP	0.84	□□□□□ -2.28
SCW11	YGL028C	RPC17	P47076	161 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	MCM22	P47167	239 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	RMR1	P53060	241 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	YGR026W	P53217	278 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	MRPL50	P53724	139 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	YMR279C	Q03263	540 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	NIP7	Q08962	181 aa	Known RBP	0.84	□□□□□ -2.28
SCW11	YGL028C	YLR126C	Q12288	251 aa		0.84	□□□□□ -2.28
SCW11	YGL028C	RAS2	P01120	322 aa	Known RBP	0.83	□□□□□ -2.28
SCW11	YGL028C	PUT1	P09368	476 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	DSF1	P0CX08	502 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	YNR073C	P0CX09	502 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	MATALPHA1	P0CY06	175 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	HMLALPHA1	P0CY07	175 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	NTF2	P33331	125 aa	Known RBP	0.83	□□□□□ -2.28
SCW11	YGL028C	YER085C	P40058	173 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	YJR056C	P47115	236 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	YHR086W-A	Q3E746	53 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	HTL1	Q9URQ5	78 aa		0.83	□□□□□ -2.28
SCW11	YGL028C	IPP1	P00817	287 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	SPT3	P06844	337 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	BCY1	P07278	416 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	MRPL25	P23369	157 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	YCR016W	P25617	290 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	VPS21	P36017	210 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	ECM33	P38248	429 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	PEX17	P40155	199 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	YMR144W	P40214	342 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	RSM25	P40496	264 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	FIS1	P40515	155 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	CAT5	P41735	233 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	HAM1	P47119	197 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
SCW11	YGL028C	DID2	P69771	204 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	ARR2	Q06597	130 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	YPL257W	Q08974	193 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	MHT1	Q12525	324 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	CFT1	Q06632	1357 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	RPL9A	P05738	191 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	ADH3	P07246	375 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	SCL1	P21243	252 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
SCW11	YGL028C	SRB4	P32569	687 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	MSN4	P33749	630 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	SRY1	P36007	326 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	LIA1	P47120	325 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	TRM9	P49957	279 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	RPL9B	P51401	191 aa	Known RBP	0.82	□□□□□ -2.28
SCW11	YGL028C	ABF2	Q02486	183 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	MRPS8	Q03799	155 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	ATG39	Q06159	398 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	TPO4	Q12256	659 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	YOR020W-A	Q3E824	90 aa		0.82	□□□□□ -2.28
SCW11	YGL028C	YBR056W-A	I2HB52	66 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	RHO1	P06780	209 aa	Known RBP	0.81	□□□□□ -2.28
SCW11	YGL028C	FBA1	P14540	359 aa	Known RBP	0.81	□□□□□ -2.28
SCW11	YGL028C	PEX4	P29340	183 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	VMA11	P32842	164 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	RIB1	P38066	345 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	YBR063C	P38083	404 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	CUE1	P38428	203 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	URA8	P38627	578 aa	Predicted RBP	0.81	□□□□□ -2.28
SCW11	YGL028C	RTC3	P38804	111 aa	Predicted RBP	0.81	□□□□□ -2.28
SCW11	YGL028C	YHR180W	P38868	163 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	YAR068W	P39564	161 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	IRC22	P40006	225 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	AYR1	P40471	297 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	PRM10	P42946	383 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	ILM1	P47155	203 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	BAT2	P47176	376 aa	Known RBP	0.81	□□□□□ -2.28
SCW11	YGL028C	ERV29	P53337	310 aa		0.81	□□□□□ -2.28
SCW11	YGL028C	PRM15	Q03262	622 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 37 ms