RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	YHR125W	P38831	101 aa		2.79	□□□□□ -1.96
NSE3	YDR288W	YER085C	P40058	173 aa		2.79	□□□□□ -1.96
NSE3	YDR288W	COS6	P53344	381 aa		2.79	□□□□□ -1.96
NSE3	YDR288W	YNL046W	P53956	172 aa		2.79	□□□□□ -1.96
NSE3	YDR288W	YPR172W	Q06608	200 aa		2.79	□□□□□ -1.96
NSE3	YDR288W	YLR030W	Q07967	263 aa		2.79	□□□□□ -1.96
NSE3	YDR288W	HTL1	Q9URQ5	78 aa		2.79	□□□□□ -1.96
NSE3	YDR288W	YHR032W-A	P0C5N6	59 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	YCR102C	P25608	368 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	YKL075C	P36083	450 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	FIS1	P40515	155 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	SNX4	P47057	423 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	YGR026W	P53217	278 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	YMR279C	Q03263	540 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	EMC6	Q12431	108 aa		2.78	□□□□□ -1.96
NSE3	YDR288W	Q0255	P03881	472 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	DSF1	P0CX08	502 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	YNR073C	P0CX09	502 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	SCO1	P23833	295 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	VMA11	P32842	164 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	TCD1	P38756	429 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	COX15	P40086	486 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	GTR2	P53290	341 aa		2.77	□□□□□ -1.97
NSE3	YDR288W	YOR283W	Q12040	230 aa	Known RBP	2.77	□□□□□ -1.97
NSE3	YDR288W	VPS21	P36017	210 aa	Known RBP	2.76	□□□□□ -1.97
NSE3	YDR288W	NSA1	P53136	463 aa	Predicted RBP	2.76	□□□□□ -1.97
NSE3	YDR288W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.76	□□□□□ -1.97	not detected
NSE3	YDR288W	PRM15	Q03262	622 aa		2.76	□□□□□ -1.97
NSE3	YDR288W	PUT1	P09368	476 aa		2.75	□□□□□ -1.97
NSE3	YDR288W	RPL24B	P24000	155 aa	Known RBP	2.75	□□□□□ -1.97
NSE3	YDR288W	CDC10	P25342	322 aa	Known RBP	2.75	□□□□□ -1.97
NSE3	YDR288W	PPA2	P28239	310 aa		2.75	□□□□□ -1.97
NSE3	YDR288W	BMH2	P34730	273 aa	Known RBP	2.75	□□□□□ -1.97
NSE3	YDR288W	HAM1	P47119	197 aa	Known RBP	2.75	□□□□□ -1.97
NSE3	YDR288W	CGI121	Q03705	181 aa	Known RBP	2.75	□□□□□ -1.97
NSE3	YDR288W	SSQ1	Q05931	657 aa	Predicted RBP	2.75	□□□□□ -1.97
NSE3	YDR288W	YOR020W-A	Q3E824	90 aa		2.75	□□□□□ -1.97
NSE3	YDR288W	ERD2	P18414	219 aa		2.74	□□□□□ -1.97
NSE3	YDR288W	RPO26	P20435	155 aa		2.74	□□□□□ -1.97
NSE3	YDR288W	YAR068W	P39564	161 aa		2.74	□□□□□ -1.97
NSE3	YDR288W	CAT5	P41735	233 aa		2.74	□□□□□ -1.97
NSE3	YDR288W	TRM9	P49957	279 aa		2.74	□□□□□ -1.97
NSE3	YDR288W	ATG39	Q06159	398 aa		2.74	□□□□□ -1.97
NSE3	YDR288W	MSA1	Q08471	629 aa		2.74	□□□□□ -1.97
NSE3	YDR288W	RPS5	P26783	225 aa	Known RBP	2.73	□□□□□ -1.97
NSE3	YDR288W	SSO1	P32867	290 aa		2.73	□□□□□ -1.97
NSE3	YDR288W	RIB1	P38066	345 aa		2.73	□□□□□ -1.97
NSE3	YDR288W	RTR1	P40084	226 aa	Predicted RBP	2.73	□□□□□ -1.97
NSE3	YDR288W	PRE6	P40303	254 aa	Known RBP	2.73	□□□□□ -1.97
NSE3	YDR288W	RPC17	P47076	161 aa		2.73	□□□□□ -1.97
NSE3	YDR288W	MCM22	P47167	239 aa		2.73	□□□□□ -1.97
NSE3	YDR288W	YML096W	Q04489	525 aa		2.73	□□□□□ -1.97
NSE3	YDR288W	RUD3	Q12234	484 aa	Known RBP	2.73	□□□□□ -1.97
NSE3	YDR288W	RHO1	P06780	209 aa	Known RBP	2.72	□□□□□ -1.97
NSE3	YDR288W	SNA3	P14359	133 aa		2.72	□□□□□ -1.97
NSE3	YDR288W	FCY2	P17064	533 aa		2.72	□□□□□ -1.97
NSE3	YDR288W	VMA6	P32366	345 aa	Known RBP	2.72	□□□□□ -1.97
NSE3	YDR288W	YPT52	P36018	234 aa	Known RBP	2.72	□□□□□ -1.97
NSE3	YDR288W	YOR062C	P36025	268 aa		2.72	□□□□□ -1.97
NSE3	YDR288W	AKR2	Q12013	749 aa		2.72	□□□□□ -1.97
NSE3	YDR288W	THP2	O13539	261 aa	Known RBP	2.71	□□□□□ -1.98
NSE3	YDR288W	RPL9A	P05738	191 aa	Known RBP	2.71	□□□□□ -1.98
NSE3	YDR288W	BCY1	P07278	416 aa	Known RBP	2.71	□□□□□ -1.98
NSE3	YDR288W	MIC12	P38341	106 aa		2.71	□□□□□ -1.98
NSE3	YDR288W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
NSE3	YDR288W	DAN1	P47178	298 aa		2.71	□□□□□ -1.98
NSE3	YDR288W	RPL9B	P51401	191 aa	Known RBP	2.71	□□□□□ -1.98
NSE3	YDR288W	YML108W	Q03759	105 aa		2.71	□□□□□ -1.98
NSE3	YDR288W	DCR2	Q05924	578 aa		2.71	□□□□□ -1.98
NSE3	YDR288W	HEM25	Q07534	307 aa		2.71	□□□□□ -1.98
NSE3	YDR288W	NIP7	Q08962	181 aa	Known RBP	2.71	□□□□□ -1.98
NSE3	YDR288W	ATO3	Q12359	275 aa		2.71	□□□□□ -1.98
NSE3	YDR288W	DRS2	P39524	1355 aa		2.71	□□□□□ -1.98
NSE3	YDR288W	COX5A	P00424	153 aa		2.7	□□□□□ -1.98
NSE3	YDR288W	NTF2	P33331	125 aa	Known RBP	2.7	□□□□□ -1.98
NSE3	YDR288W	ABF2	Q02486	183 aa		2.7	□□□□□ -1.98
NSE3	YDR288W	YMD8	Q03697	442 aa		2.7	□□□□□ -1.98
NSE3	YDR288W	CDC123	Q05791	360 aa		2.7	□□□□□ -1.98
NSE3	YDR288W	SIR4	P11978	1358 aa		2.7	□□□□□ -1.98
NSE3	YDR288W	NHP6B	P11633	99 aa	Known RBP	2.69	□□□□□ -1.98
NSE3	YDR288W	YMR31	P19955	123 aa		2.69	□□□□□ -1.98
NSE3	YDR288W	DOA4	P32571	926 aa		2.69	□□□□□ -1.98
NSE3	YDR288W	RPF1	P38805	295 aa	Known RBP	2.69	□□□□□ -1.98
NSE3	YDR288W	YIL001W	P40560	513 aa		2.69	□□□□□ -1.98
NSE3	YDR288W	YJR056C	P47115	236 aa		2.69	□□□□□ -1.98
NSE3	YDR288W	YJR149W	P47177	404 aa		2.69	□□□□□ -1.98
NSE3	YDR288W	FYV6	P53913	173 aa		2.69	□□□□□ -1.98
NSE3	YDR288W	NRG2	P38082	220 aa		2.68	□□□□□ -1.98
NSE3	YDR288W	YBR063C	P38083	404 aa		2.68	□□□□□ -1.98
NSE3	YDR288W	SMD3	P43321	101 aa	Known RBP	2.68	□□□□□ -1.98
NSE3	YDR288W	OTU1	P43558	301 aa		2.68	□□□□□ -1.98
NSE3	YDR288W	ERV29	P53337	310 aa		2.68	□□□□□ -1.98
NSE3	YDR288W	RPL28	P02406	149 aa	Known RBP	2.67	□□□□□ -1.98
NSE3	YDR288W	SPT3	P06844	337 aa		2.67	□□□□□ -1.98
NSE3	YDR288W	URA6	P15700	204 aa		2.67	□□□□□ -1.98
NSE3	YDR288W	PEX17	P40155	199 aa		2.67	□□□□□ -1.98
NSE3	YDR288W	RNH1	Q04740	348 aa		2.67	□□□□□ -1.98
NSE3	YDR288W	YPL229W	Q99395	206 aa		2.67	□□□□□ -1.98
NSE3	YDR288W	MSW1	P04803	379 aa		2.66	□□□□□ -1.98
NSE3	YDR288W	RPA43	P46669	326 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms