RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C GPI15P53961 229 aa5.54□□□□□ -1.52
VPS61YDR136C NRG1Q03125 231 aa5.54□□□□□ -1.52
VPS61YDR136C MRPS17Q03246 237 aaPredicted RBP5.54□□□□□ -1.52
VPS61YDR136C ERP1Q05359 219 aaKnown RBP5.54□□□□□ -1.52
VPS61YDR136C RTT103Q05543 409 aa5.54□□□□□ -1.52
VPS61YDR136C YPR063CQ12160 140 aa5.54□□□□□ -1.52
VPS61YDR136C VAM3Q12241 283 aa5.54□□□□□ -1.52
VPS61YDR136C RPL13AQ12690 199 aaPredicted RBP5.54□□□□□ -1.52
VPS61YDR136C QCR2P07257 368 aa5.53□□□□□ -1.52
VPS61YDR136C YFR010W-AP0C5N0 62 aa5.53□□□□□ -1.52
VPS61YDR136C PRE9P23638 258 aaKnown RBP5.53□□□□□ -1.52
VPS61YDR136C MEK1P24719 497 aaPredicted RBP5.53□□□□□ -1.52
VPS61YDR136C RFA3P26755 122 aaKnown RBP5.53□□□□□ -1.52
VPS61YDR136C EMP70P32802 667 aa5.53□□□□□ -1.52
VPS61YDR136C RPS27AP35997 82 aaKnown RBP5.53□□□□□ -1.52
VPS61YDR136C UMP1P38293 148 aa5.53□□□□□ -1.52
VPS61YDR136C RPS27BP38711 82 aa5.53□□□□□ -1.52
VPS61YDR136C RMD6P39975 231 aa5.53□□□□□ -1.52
VPS61YDR136C SPC25P40014 221 aa5.53□□□□□ -1.52
VPS61YDR136C YIL152WP40455 235 aa5.53□□□□□ -1.52
VPS61YDR136C ADO1P47143 340 aaKnown RBP5.53□□□□□ -1.52
VPS61YDR136C MNN10P50108 393 aaKnown RBP5.53□□□□□ -1.52
VPS61YDR136C PKP2P53170 491 aa5.53□□□□□ -1.52
VPS61YDR136C YLR460CP54007 376 aa5.53□□□□□ -1.52
VPS61YDR136C PAL1Q05518 499 aaKnown RBP5.53□□□□□ -1.52
VPS61YDR136C IRC19Q07843 230 aa5.53□□□□□ -1.52
VPS61YDR136C YPL272CQ08984 517 aa5.53□□□□□ -1.52
VPS61YDR136C TGS1Q12052 315 aa5.53□□□□□ -1.52
VPS61YDR136C YCT1Q12235 531 aa5.53□□□□□ -1.52
VPS61YDR136C CMC2Q3E7A4 109 aa5.53□□□□□ -1.52
VPS61YDR136C AIM17P23180 465 aaKnown RBP5.52□□□□□ -1.53
VPS61YDR136C HOG1P32485 435 aa5.52□□□□□ -1.53
VPS61YDR136C AGA2P32781 87 aa5.52□□□□□ -1.53
VPS61YDR136C SDH4P37298 181 aa5.52□□□□□ -1.53
VPS61YDR136C ERV15P38312 142 aa5.52□□□□□ -1.53
VPS61YDR136C YJL193WP39542 402 aa5.52□□□□□ -1.53
VPS61YDR136C YEA6P39953 335 aa5.52□□□□□ -1.53
VPS61YDR136C VMA21P41806 77 aa5.52□□□□□ -1.53
VPS61YDR136C HXT14P42833 540 aa5.52□□□□□ -1.53
VPS61YDR136C PRY1P47032 299 aa5.52□□□□□ -1.53
VPS61YDR136C YJR056CP47115 236 aa5.52□□□□□ -1.53
VPS61YDR136C SSN8P47821 323 aa5.52□□□□□ -1.53
VPS61YDR136C TIM21P53220 239 aa5.52□□□□□ -1.53
VPS61YDR136C SNP1Q00916 300 aaPredicted RBP5.52□□□□□ -1.53
VPS61YDR136C THI74Q04083 370 aa5.52□□□□□ -1.53
VPS61YDR136C YMR253CQ04835 414 aa5.52□□□□□ -1.53
VPS61YDR136C CRR1Q05790 422 aa5.52□□□□□ -1.53
VPS61YDR136C THI73Q07904 523 aa5.52□□□□□ -1.53
VPS61YDR136C YLR030WQ07967 263 aa5.52□□□□□ -1.53
VPS61YDR136C MCH4Q08268 501 aa5.52□□□□□ -1.53
VPS61YDR136C UBA3Q99344 299 aa5.52□□□□□ -1.53
VPS61YDR136C MSW1P04803 379 aa5.51□□□□□ -1.53
VPS61YDR136C CDC7P06243 507 aa5.51□□□□□ -1.53
VPS61YDR136C ERS1P17261 260 aa5.51□□□□□ -1.53
VPS61YDR136C RFA1P22336 621 aaKnown RBP5.51□□□□□ -1.53
VPS61YDR136C MIR1P23641 311 aaKnown RBP5.51□□□□□ -1.53
VPS61YDR136C SCO1P23833 295 aa5.51□□□□□ -1.53
VPS61YDR136C KRR1P25586 316 aaPredicted RBP5.51□□□□□ -1.53
VPS61YDR136C AFG1P32317 509 aa5.51□□□□□ -1.53
VPS61YDR136C SRX1P36077 127 aa5.51□□□□□ -1.53
VPS61YDR136C FRM2P37261 193 aa5.51□□□□□ -1.53
VPS61YDR136C CDS1P38221 457 aa5.51□□□□□ -1.53
VPS61YDR136C OM14P38325 134 aa5.51□□□□□ -1.53
VPS61YDR136C IMD2P38697 523 aaKnown RBP5.51□□□□□ -1.53
VPS61YDR136C GPP1P41277 250 aaKnown RBP5.51□□□□□ -1.53
VPS61YDR136C CIS3P47001 227 aa5.51□□□□□ -1.53
VPS61YDR136C DAN1P47178 298 aa5.51□□□□□ -1.53
VPS61YDR136C SEH1P53011 349 aaKnown RBP5.51□□□□□ -1.53
VPS61YDR136C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
VPS61YDR136C YMR210WQ03649 449 aa5.51□□□□□ -1.53
VPS61YDR136C NNT1Q05874 261 aa5.51□□□□□ -1.53
VPS61YDR136C YPR147CQ06522 304 aaKnown RBP5.51□□□□□ -1.53
VPS61YDR136C YFT2Q06676 274 aa5.51□□□□□ -1.53
VPS61YDR136C MIM1Q08176 113 aa5.51□□□□□ -1.53
VPS61YDR136C MED4Q12343 284 aa5.51□□□□□ -1.53
VPS61YDR136C ERP4Q12450 207 aa5.51□□□□□ -1.53
VPS61YDR136C AIM45Q12480 344 aaKnown RBP5.51□□□□□ -1.53
VPS61YDR136C SCEIP03882 235 aa5.5□□□□□ -1.53
VPS61YDR136C RPB3P16370 318 aaKnown RBP5.5□□□□□ -1.53
VPS61YDR136C YBL010CP32788 280 aa5.5□□□□□ -1.53
VPS61YDR136C MRPL4P36517 319 aa5.5□□□□□ -1.53
VPS61YDR136C TOK1P40310 691 aa5.5□□□□□ -1.53
VPS61YDR136C SHR5P41912 237 aa5.5□□□□□ -1.53
VPS61YDR136C ALG9P53868 555 aaKnown RBP5.5□□□□□ -1.53
VPS61YDR136C RNH201P53942 307 aa5.5□□□□□ -1.53
VPS61YDR136C TMA23Q03525 211 aa5.5□□□□□ -1.53
VPS61YDR136C ASM4Q05166 528 aa5.5□□□□□ -1.53
VPS61YDR136C STP3Q05937 343 aa5.5□□□□□ -1.53
VPS61YDR136C SEI1Q06058 285 aa5.5□□□□□ -1.53
VPS61YDR136C YDL086WQ07505 273 aa5.5□□□□□ -1.53
VPS61YDR136C YRA1Q12159 226 aaKnown RBP5.5□□□□□ -1.53
VPS61YDR136C HMS1Q12398 434 aa5.5□□□□□ -1.53
VPS61YDR136C GLK1P17709 500 aaKnown RBP5.49□□□□□ -1.53
VPS61YDR136C SEC59P20048 519 aa5.49□□□□□ -1.53
VPS61YDR136C IMG1P25626 169 aa5.49□□□□□ -1.53
VPS61YDR136C FAA1P30624 700 aaKnown RBP5.49□□□□□ -1.53
VPS61YDR136C HSP150P32478 413 aa5.49□□□□□ -1.53
VPS61YDR136C FAT1P38225 669 aa5.49□□□□□ -1.53
VPS61YDR136C SEN34P39707 275 aa5.49□□□□□ -1.53
VPS61YDR136C YEA4P40004 342 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms