RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C RPS1BP23248 255 aaKnown RBP3.37□□□□□ -1.87
RPO21YDL140C OM14P38325 134 aa3.37□□□□□ -1.87
RPO21YDL140C IPI1P38803 334 aaPredicted RBP3.37□□□□□ -1.87
RPO21YDL140C NSA2P40078 261 aaKnown RBP3.37□□□□□ -1.87
RPO21YDL140C YIL086CP40503 102 aa3.37□□□□□ -1.87
RPO21YDL140C SAD1P43589 448 aa3.37□□□□□ -1.87
RPO21YDL140C RBG2P53295 368 aaKnown RBP3.37□□□□□ -1.87
RPO21YDL140C SGF11Q03067 99 aa3.37□□□□□ -1.87
RPO21YDL140C TRM10Q12400 293 aa3.37□□□□□ -1.87
RPO21YDL140C RPL26AP05743 127 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C ERJ5P43613 295 aaPredicted RBP3.36□□□□□ -1.87
RPO21YDL140C RPL26BP53221 127 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C ASA1Q06822 443 aa3.36□□□□□ -1.87
RPO21YDL140C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
RPO21YDL140C PST2Q12335 198 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C UBA3Q99344 299 aa3.36□□□□□ -1.87
RPO21YDL140C PAD1P33751 242 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
RPO21YDL140C DUO1P53168 247 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C RIM8P53179 542 aa3.36□□□□□ -1.87
RPO21YDL140C YMR310CQ04867 317 aaPredicted RBP3.36□□□□□ -1.87
RPO21YDL140C STE2D6VTK4 431 aa3.36□□□□□ -1.87
RPO21YDL140C SMX2P40204 77 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C FLX1P40464 311 aa3.36□□□□□ -1.87
RPO21YDL140C HPM1P40481 377 aa3.36□□□□□ -1.87
RPO21YDL140C PRM10P42946 383 aa3.36□□□□□ -1.87
RPO21YDL140C PKR1Q03880 122 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C TVP18Q04767 167 aa3.36□□□□□ -1.87
RPO21YDL140C RRG7Q08774 242 aaPredicted RBP3.36□□□□□ -1.87
RPO21YDL140C SME1Q12330 94 aaPredicted RBP3.36□□□□□ -1.87
RPO21YDL140C MPD1Q12404 318 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C TFC7Q12415 435 aa3.36□□□□□ -1.87
RPO21YDL140C YPR117WQ06116 2489 aa3.36□□□□□ -1.87
RPO21YDL140C DPM1P14020 267 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C MIR1P23641 311 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C CDC20P26309 610 aa3.36□□□□□ -1.87
RPO21YDL140C OAC1P32332 324 aa3.36□□□□□ -1.87
RPO21YDL140C ERV15P38312 142 aa3.36□□□□□ -1.87
RPO21YDL140C SUT1P53032 299 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C MPC1P53157 130 aaKnown RBP3.36□□□□□ -1.87
RPO21YDL140C YML079WQ03629 201 aa3.36□□□□□ -1.87
RPO21YDL140C FRQ1Q06389 190 aa3.36□□□□□ -1.87
RPO21YDL140C TSC3Q3E790 80 aa3.36□□□□□ -1.87
RPO21YDL140C HTL1Q9URQ5 78 aa3.36□□□□□ -1.87
RPO21YDL140C YPK2P18961 677 aa3.35□□□□□ -1.87
RPO21YDL140C CDC42P19073 191 aa3.35□□□□□ -1.87
RPO21YDL140C RPS2P25443 254 aaKnown RBP3.35□□□□□ -1.87
RPO21YDL140C DAL80P26343 269 aa3.35□□□□□ -1.87
RPO21YDL140C UGX2P32772 223 aa3.35□□□□□ -1.87
RPO21YDL140C DMA1P38823 416 aa3.35□□□□□ -1.87
RPO21YDL140C YNL046WP53956 172 aa3.35□□□□□ -1.87
RPO21YDL140C PMP3P87284 55 aa3.35□□□□□ -1.87
RPO21YDL140C IZH3Q07959 543 aa3.35□□□□□ -1.87
RPO21YDL140C OSW1Q08692 278 aa3.35□□□□□ -1.87
RPO21YDL140C YDL176WQ12027 708 aa3.35□□□□□ -1.87
RPO21YDL140C YLR099W-AQ3E798 87 aa3.35□□□□□ -1.87
RPO21YDL140C ODC2Q99297 307 aa3.35□□□□□ -1.87
RPO21YDL140C ANB1P19211 157 aa3.35□□□□□ -1.87
RPO21YDL140C AGX1P43567 385 aa3.35□□□□□ -1.87
RPO21YDL140C GPG1P53130 126 aa3.35□□□□□ -1.87
RPO21YDL140C HSK3P69852 69 aa3.35□□□□□ -1.87
RPO21YDL140C RRP5Q05022 1729 aaKnown RBP3.35□□□□□ -1.87
RPO21YDL140C FRM2P37261 193 aa3.35□□□□□ -1.87
RPO21YDL140C YJL163CP46996 555 aa3.35□□□□□ -1.87
RPO21YDL140C CTR1P49573 406 aa3.35□□□□□ -1.87
RPO21YDL140C PRM8P53174 237 aa3.35□□□□□ -1.87
RPO21YDL140C RAV2Q03956 351 aa3.35□□□□□ -1.87
RPO21YDL140C ISR1Q06098 443 aaKnown RBP3.35□□□□□ -1.87
RPO21YDL140C PPT2Q12036 173 aa3.35□□□□□ -1.87
RPO21YDL140C MED11Q99278 115 aa3.35□□□□□ -1.87
RPO21YDL140C ISF1P32488 338 aa3.35□□□□□ -1.87
RPO21YDL140C MRPL38P35996 138 aaPredicted RBP3.35□□□□□ -1.87
RPO21YDL140C CMC1P36064 111 aa3.35□□□□□ -1.87
RPO21YDL140C MRPL4P36517 319 aa3.35□□□□□ -1.87
RPO21YDL140C LSM4P40070 187 aaKnown RBP3.35□□□□□ -1.87
RPO21YDL140C TEX1P53851 422 aaKnown RBP3.35□□□□□ -1.87
RPO21YDL140C CWC27Q02770 301 aa3.35□□□□□ -1.87
RPO21YDL140C ILV2P07342 687 aaKnown RBP3.34□□□□□ -1.87
RPO21YDL140C UTP30P36144 274 aaKnown RBP3.34□□□□□ -1.87
RPO21YDL140C SKG1P36169 355 aa3.34□□□□□ -1.87
RPO21YDL140C PDX3P38075 228 aaKnown RBP3.34□□□□□ -1.87
RPO21YDL140C SHE1P38200 338 aa3.34□□□□□ -1.87
RPO21YDL140C YBR137WP38276 179 aa3.34□□□□□ -1.87
RPO21YDL140C YER079WP40052 210 aaKnown RBP3.34□□□□□ -1.87
RPO21YDL140C RPA14P50106 137 aa3.34□□□□□ -1.87
RPO21YDL140C MRPL22P53881 309 aa3.34□□□□□ -1.87
RPO21YDL140C YJR112W-AQ3E743 109 aa3.34□□□□□ -1.87
RPO21YDL140C TOM40P23644 387 aaKnown RBP3.34□□□□□ -1.87
RPO21YDL140C PTP2P29461 750 aa3.34□□□□□ -1.87
RPO21YDL140C SSN8P47821 323 aa3.34□□□□□ -1.87
RPO21YDL140C CAF40P53829 373 aa3.34□□□□□ -1.87
RPO21YDL140C YNL033WP53964 284 aa3.34□□□□□ -1.87
RPO21YDL140C YNL019CP53975 284 aa3.34□□□□□ -1.87
RPO21YDL140C AVO1Q08236 1176 aa3.34□□□□□ -1.87
RPO21YDL140C YCT1Q12235 531 aa3.34□□□□□ -1.87
RPO21YDL140C NDC1P32500 655 aa3.34□□□□□ -1.88
RPO21YDL140C YIL169CP40442 995 aa3.34□□□□□ -1.88
RPO21YDL140C PFA4Q12006 378 aa3.34□□□□□ -1.88
RPO21YDL140C HTB1P02293 131 aaKnown RBP3.34□□□□□ -1.88
RPO21YDL140C SPS2P08459 502 aa3.34□□□□□ -1.88
RPO21YDL140C RHB1P25378 209 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms