RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W TY1A-ER2P0CX66 440 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-GR3P0CX67 440 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-LR1P0CX68 440 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-MR2P0CX69 440 aa6.96□□□□□ -1.3
NDE2YDL085W APA2P22108 325 aa6.96□□□□□ -1.3
NDE2YDL085W SHM2P37291 469 aaKnown RBP6.96□□□□□ -1.3
NDE2YDL085W BUD8P41698 603 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-JR2P47099 440 aa6.96□□□□□ -1.3
NDE2YDL085W HSV2P50079 448 aaPredicted RBP6.96□□□□□ -1.3
NDE2YDL085W APJ1P53940 528 aa6.96□□□□□ -1.3
NDE2YDL085W EST3Q03096 181 aa6.96□□□□□ -1.3
NDE2YDL085W YDR248CQ03786 193 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-DR1Q03856 440 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-ML1Q04706 440 aaKnown RBP6.96□□□□□ -1.3
NDE2YDL085W RRT7Q07829 113 aa6.96□□□□□ -1.3
NDE2YDL085W YRA1Q12159 226 aaKnown RBP6.96□□□□□ -1.3
NDE2YDL085W TY1A-BRQ12217 440 aa6.96□□□□□ -1.3
NDE2YDL085W MCT1Q12283 360 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-NL2Q12470 440 aa6.96□□□□□ -1.3
NDE2YDL085W TY1A-GR2Q12485 440 aa6.96□□□□□ -1.3
NDE2YDL085W YOR032W-AQ8TGS1 66 aa6.96□□□□□ -1.3
NDE2YDL085W YMR084WA2P2R3 262 aa6.95□□□□□ -1.3
NDE2YDL085W COX1P00401 534 aa6.95□□□□□ -1.3
NDE2YDL085W RTC3P38804 111 aaPredicted RBP6.95□□□□□ -1.3
NDE2YDL085W GPI16P38875 610 aa6.95□□□□□ -1.3
NDE2YDL085W YER010CP40011 234 aa6.95□□□□□ -1.3
NDE2YDL085W RPL13BP40212 199 aaKnown RBP6.95□□□□□ -1.3
NDE2YDL085W CUP9P41817 306 aa6.95□□□□□ -1.3
NDE2YDL085W LSM8P47093 109 aaKnown RBP6.95□□□□□ -1.3
NDE2YDL085W YGR066CP53242 292 aa6.95□□□□□ -1.3
NDE2YDL085W YGR126WP53274 230 aa6.95□□□□□ -1.3
NDE2YDL085W SNO1Q03144 224 aa6.95□□□□□ -1.3
NDE2YDL085W YMR279CQ03263 540 aa6.95□□□□□ -1.3
NDE2YDL085W SCP1Q08873 200 aa6.95□□□□□ -1.3
NDE2YDL085W VAM3Q12241 283 aa6.95□□□□□ -1.3
NDE2YDL085W PRS5Q12265 496 aaKnown RBP6.95□□□□□ -1.3
NDE2YDL085W RPL13AQ12690 199 aaPredicted RBP6.95□□□□□ -1.3
NDE2YDL085W BEM2P39960 2167 aaKnown RBP6.95□□□□□ -1.3
NDE2YDL085W CYR1P08678 2026 aaKnown RBP6.95□□□□□ -1.3
NDE2YDL085W SGA1P08019 549 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-LR4P0C2I8 440 aaKnown RBP6.94□□□□□ -1.3
NDE2YDL085W YML003WP0CF16 290 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-DR6P0CX70 440 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-ER1P0CX71 440 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-LR2P0CX72 440 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-PLP0CX73 440 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-JR1P0CX74 440 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-LR3P0CX75 440 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-ML2P0CX76 440 aa6.94□□□□□ -1.3
NDE2YDL085W YHR214C-DP0CX93 97 aa6.94□□□□□ -1.3
NDE2YDL085W VMA5P31412 392 aaKnown RBP6.94□□□□□ -1.3
NDE2YDL085W ERG3P32353 365 aa6.94□□□□□ -1.3
NDE2YDL085W SIP1P32578 815 aa6.94□□□□□ -1.3
NDE2YDL085W YHR210CP38893 341 aa6.94□□□□□ -1.3
NDE2YDL085W PMT3P47190 753 aa6.94□□□□□ -1.3
NDE2YDL085W SKP1P52286 194 aa6.94□□□□□ -1.3
NDE2YDL085W UFD1P53044 361 aa6.94□□□□□ -1.3
NDE2YDL085W PKP2P53170 491 aa6.94□□□□□ -1.3
NDE2YDL085W CGI121Q03705 181 aaKnown RBP6.94□□□□□ -1.3
NDE2YDL085W FIT1Q04433 528 aa6.94□□□□□ -1.3
NDE2YDL085W CTS2Q06350 511 aa6.94□□□□□ -1.3
NDE2YDL085W GRE1Q08969 168 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-GR1Q12085 440 aa6.94□□□□□ -1.3
NDE2YDL085W CMC2Q3E7A4 109 aa6.94□□□□□ -1.3
NDE2YDL085W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.94□□□□□ -1.3
NDE2YDL085W TY1A-OLQ92392 440 aaKnown RBP6.94□□□□□ -1.3
NDE2YDL085W PDX1P16451 410 aa6.94□□□□□ -1.3
NDE2YDL085W SED4P25365 1065 aa6.94□□□□□ -1.3
NDE2YDL085W MTC7P32633 139 aa6.94□□□□□ -1.3
NDE2YDL085W RMD6P39975 231 aa6.94□□□□□ -1.3
NDE2YDL085W NSE4P43124 402 aa6.94□□□□□ -1.3
NDE2YDL085W AGX1P43567 385 aa6.94□□□□□ -1.3
NDE2YDL085W NIT2P47016 307 aa6.94□□□□□ -1.3
NDE2YDL085W SOL1P50278 321 aa6.94□□□□□ -1.3
NDE2YDL085W MRPL22P53881 309 aa6.94□□□□□ -1.3
NDE2YDL085W AGE1Q04412 482 aa6.94□□□□□ -1.3
NDE2YDL085W RTT103Q05543 409 aa6.94□□□□□ -1.3
NDE2YDL085W YPL272CQ08984 517 aa6.94□□□□□ -1.3
NDE2YDL085W HMS1Q12398 434 aa6.94□□□□□ -1.3
NDE2YDL085W AFG1P32317 509 aa6.93□□□□□ -1.3
NDE2YDL085W ATG8P38182 117 aaRIP-Chip data6.93□□□□□ -1.3not detected
NDE2YDL085W YBR096WP38256 230 aa6.93□□□□□ -1.3
NDE2YDL085W IMD2P38697 523 aaKnown RBP6.93□□□□□ -1.3
NDE2YDL085W ADO1P47143 340 aaKnown RBP6.93□□□□□ -1.3
NDE2YDL085W RNH201P53942 307 aa6.93□□□□□ -1.3
NDE2YDL085W ACS1Q01574 713 aa6.93□□□□□ -1.3
NDE2YDL085W YMR265CQ03508 461 aaKnown RBP6.93□□□□□ -1.3
NDE2YDL085W HAS1Q03532 505 aaKnown RBP6.93□□□□□ -1.3
NDE2YDL085W MDM30Q05930 598 aa6.93□□□□□ -1.3
NDE2YDL085W FRE7Q12333 620 aa6.93□□□□□ -1.3
NDE2YDL085W SWM1Q12379 170 aa6.93□□□□□ -1.3
NDE2YDL085W DGK1Q12382 290 aa6.93□□□□□ -1.3
NDE2YDL085W CDC36P06100 191 aaPredicted RBP6.92□□□□□ -1.3
NDE2YDL085W ARO4P32449 370 aaKnown RBP6.92□□□□□ -1.3
NDE2YDL085W UTH1P36135 365 aa6.92□□□□□ -1.3
NDE2YDL085W CDS1P38221 457 aa6.92□□□□□ -1.3
NDE2YDL085W SHO1P40073 367 aa6.92□□□□□ -1.3
NDE2YDL085W GNA1P43577 159 aaPredicted RBP6.92□□□□□ -1.3
NDE2YDL085W YJR056CP47115 236 aa6.92□□□□□ -1.3
NDE2YDL085W PGU1P47180 361 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms