RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W RTC3P38804 111 aaPredicted RBP5.92□□□□□ -1.46
BDF2YDL070W CCC1P47818 322 aa5.92□□□□□ -1.46
BDF2YDL070W YGR149WP48236 432 aa5.92□□□□□ -1.46
BDF2YDL070W RPL9BP51401 191 aaKnown RBP5.92□□□□□ -1.46
BDF2YDL070W ACS2P52910 683 aaKnown RBP5.92□□□□□ -1.46
BDF2YDL070W NSA1P53136 463 aaPredicted RBP5.92□□□□□ -1.46
BDF2YDL070W SMM1P53720 384 aaKnown RBP5.92□□□□□ -1.46
BDF2YDL070W CWC27Q02770 301 aa5.92□□□□□ -1.46
BDF2YDL070W EKI1Q03764 534 aa5.92□□□□□ -1.46
BDF2YDL070W YDR248CQ03786 193 aa5.92□□□□□ -1.46
BDF2YDL070W RUB1Q03919 77 aa5.92□□□□□ -1.46
BDF2YDL070W FDH1Q08911 376 aa5.92□□□□□ -1.46
BDF2YDL070W MATALPHA1P0CY06 175 aa5.91□□□□□ -1.46
BDF2YDL070W HMLALPHA1P0CY07 175 aa5.91□□□□□ -1.46
BDF2YDL070W BET2P20133 325 aa5.91□□□□□ -1.46
BDF2YDL070W PDE1P22434 369 aa5.91□□□□□ -1.46
BDF2YDL070W MDH3P32419 343 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
BDF2YDL070W MOB1P40484 314 aa5.91□□□□□ -1.46
BDF2YDL070W RPA34P47006 233 aaPredicted RBP5.91□□□□□ -1.46
BDF2YDL070W ERG26P53199 349 aaKnown RBP5.91□□□□□ -1.46
BDF2YDL070W YPL014WQ02606 381 aa5.91□□□□□ -1.46
BDF2YDL070W TMN2Q04562 672 aa5.91□□□□□ -1.46
BDF2YDL070W POM33Q12164 279 aa5.91□□□□□ -1.46
BDF2YDL070W MSB2P32334 1306 aa5.91□□□□□ -1.46
BDF2YDL070W RPS25BP0C0T4 108 aaKnown RBP5.91□□□□□ -1.46
BDF2YDL070W RPL31AP0C2H8 113 aaKnown RBP5.91□□□□□ -1.46
BDF2YDL070W RPL31BP0C2H9 113 aaKnown RBP5.91□□□□□ -1.46
BDF2YDL070W RPB5P20434 215 aa5.91□□□□□ -1.46
BDF2YDL070W CPR2P23285 205 aa5.91□□□□□ -1.46
BDF2YDL070W COQ3P27680 312 aa5.91□□□□□ -1.46
BDF2YDL070W ALK2P32789 676 aaPredicted RBP5.91□□□□□ -1.46
BDF2YDL070W YEA4P40004 342 aa5.91□□□□□ -1.46
BDF2YDL070W ALG12P53730 551 aa5.91□□□□□ -1.46
BDF2YDL070W ROY1Q04847 553 aa5.91□□□□□ -1.46
BDF2YDL070W ASM4Q05166 528 aa5.91□□□□□ -1.46
BDF2YDL070W SRL2Q12020 392 aa5.91□□□□□ -1.46
BDF2YDL070W RPS25AQ3E792 108 aaPredicted RBP5.91□□□□□ -1.46
BDF2YDL070W GDH1P07262 454 aaKnown RBP5.9□□□□□ -1.46
BDF2YDL070W MIR1P23641 311 aaKnown RBP5.9□□□□□ -1.46
BDF2YDL070W TIM12P32830 109 aa5.9□□□□□ -1.46
BDF2YDL070W SLC1P33333 303 aa5.9□□□□□ -1.46
BDF2YDL070W RPL14AP36105 138 aaKnown RBP5.9□□□□□ -1.46
BDF2YDL070W VBA2P38358 474 aaKnown RBP5.9□□□□□ -1.46
BDF2YDL070W SOH1P38633 127 aa5.9□□□□□ -1.46
BDF2YDL070W RPL14BP38754 138 aaKnown RBP5.9□□□□□ -1.46
BDF2YDL070W FLO5P38894 1075 aa5.9□□□□□ -1.46
BDF2YDL070W HEM14P40012 539 aa5.9□□□□□ -1.46
BDF2YDL070W PHS1P40857 217 aa5.9□□□□□ -1.46
BDF2YDL070W YJR012CP47087 207 aa5.9□□□□□ -1.46
BDF2YDL070W OGG1P53397 376 aaPredicted RBP5.9□□□□□ -1.46
BDF2YDL070W INP1Q03694 420 aa5.9□□□□□ -1.46
BDF2YDL070W VAM3Q12241 283 aa5.9□□□□□ -1.46
BDF2YDL070W HOP09932 586 aa5.89□□□□□ -1.47
BDF2YDL070W OLE1P21147 510 aaKnown RBP5.89□□□□□ -1.47
BDF2YDL070W MRS4P23500 304 aa5.89□□□□□ -1.47
BDF2YDL070W STP22P25604 385 aa5.89□□□□□ -1.47
BDF2YDL070W ERG1P32476 496 aaKnown RBP5.89□□□□□ -1.47
BDF2YDL070W UPS2P35200 230 aa5.89□□□□□ -1.47
BDF2YDL070W WSS1P38838 269 aa5.89□□□□□ -1.47
BDF2YDL070W PEX28P38848 579 aa5.89□□□□□ -1.47
BDF2YDL070W NSA2P40078 261 aaKnown RBP5.89□□□□□ -1.47
BDF2YDL070W PAU5P43575 122 aa5.89□□□□□ -1.47
BDF2YDL070W COX16P47081 118 aa5.89□□□□□ -1.47
BDF2YDL070W RMD9P53140 646 aaKnown RBP5.89□□□□□ -1.47
BDF2YDL070W SCW4P53334 386 aaKnown RBP5.89□□□□□ -1.47
BDF2YDL070W YNR066CP53752 436 aa5.89□□□□□ -1.47
BDF2YDL070W ALG9P53868 555 aaKnown RBP5.89□□□□□ -1.47
BDF2YDL070W ROT1Q03691 256 aa5.89□□□□□ -1.47
BDF2YDL070W GIC2Q06648 383 aa5.89□□□□□ -1.47
BDF2YDL070W YOL073CQ08232 322 aa5.89□□□□□ -1.47
BDF2YDL070W SUL2Q12325 893 aa5.89□□□□□ -1.47
BDF2YDL070W IZH2Q12442 317 aa5.89□□□□□ -1.47
BDF2YDL070W LAS17Q12446 633 aa5.89□□□□□ -1.47
BDF2YDL070W SLY41P22215 453 aa5.89□□□□□ -1.47
BDF2YDL070W ERG3P32353 365 aa5.89□□□□□ -1.47
BDF2YDL070W RPP1P38786 293 aa5.89□□□□□ -1.47
BDF2YDL070W SKN7P38889 622 aa5.89□□□□□ -1.47
BDF2YDL070W IRC22P40006 225 aa5.89□□□□□ -1.47
BDF2YDL070W VPS28Q02767 242 aa5.89□□□□□ -1.47
BDF2YDL070W YCT1Q12235 531 aa5.89□□□□□ -1.47
BDF2YDL070W NUM1Q00402 2748 aa5.89□□□□□ -1.47
BDF2YDL070W RPS13P05756 151 aaKnown RBP5.88□□□□□ -1.47
BDF2YDL070W YBR096WP38256 230 aa5.88□□□□□ -1.47
BDF2YDL070W RPL13BP40212 199 aaKnown RBP5.88□□□□□ -1.47
BDF2YDL070W BUD8P41698 603 aa5.88□□□□□ -1.47
BDF2YDL070W MRX8Q05473 314 aa5.88□□□□□ -1.47
BDF2YDL070W ISR1Q06098 443 aaKnown RBP5.88□□□□□ -1.47
BDF2YDL070W PIN3Q06449 215 aa5.88□□□□□ -1.47
BDF2YDL070W AKR2Q12013 749 aa5.88□□□□□ -1.47
BDF2YDL070W ATG5Q12380 294 aa5.88□□□□□ -1.47
BDF2YDL070W RPL13AQ12690 199 aaPredicted RBP5.88□□□□□ -1.47
BDF2YDL070W SEN1Q00416 2231 aaKnown RBP5.88□□□□□ -1.47
BDF2YDL070W QCR2P07257 368 aa5.87□□□□□ -1.47
BDF2YDL070W BGL2P15703 313 aaKnown RBP5.87□□□□□ -1.47
BDF2YDL070W NPR1P22211 790 aa5.87□□□□□ -1.47
BDF2YDL070W LSB5P25369 354 aa5.87□□□□□ -1.47
BDF2YDL070W SLM6P38343 150 aa5.87□□□□□ -1.47
BDF2YDL070W SSH1P38353 490 aaKnown RBP5.87□□□□□ -1.47
BDF2YDL070W YBR292CP38357 123 aa5.87□□□□□ -1.47
BDF2YDL070W YHR210CP38893 341 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms