RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C RGT2Q12300 763 aa3.45□□□□□ -1.86
PRP11YDL043C YOR012WQ12351 137 aa3.45□□□□□ -1.86
PRP11YDL043C CSR2Q12734 1121 aa3.45□□□□□ -1.86
PRP11YDL043C IZH4Q99393 312 aa3.45□□□□□ -1.86
PRP11YDL043C BI3Q9ZZW7 517 aa3.45□□□□□ -1.86
PRP11YDL043C PAN1P32521 1480 aa3.45□□□□□ -1.86
PRP11YDL043C STU1P38198 1513 aa3.44□□□□□ -1.86
PRP11YDL043C OPI3P05375 206 aa3.44□□□□□ -1.86
PRP11YDL043C CYC3P06182 269 aa3.44□□□□□ -1.86
PRP11YDL043C ASP3-2P0CX77 362 aa3.44□□□□□ -1.86
PRP11YDL043C ASP3-3P0CX78 362 aa3.44□□□□□ -1.86
PRP11YDL043C ASP3-4P0CX79 362 aa3.44□□□□□ -1.86
PRP11YDL043C ASP3-1P0CZ17 362 aa3.44□□□□□ -1.86
PRP11YDL043C FUN14P18411 198 aa3.44□□□□□ -1.86
PRP11YDL043C SLM5P25345 492 aaKnown RBP3.44□□□□□ -1.86
PRP11YDL043C YCR022CP25620 114 aa3.44□□□□□ -1.86
PRP11YDL043C TIP1P27654 210 aaPredicted RBP3.44□□□□□ -1.86
PRP11YDL043C EHD3P28817 500 aa3.44□□□□□ -1.86
PRP11YDL043C LDS1P31379 325 aa3.44□□□□□ -1.86
PRP11YDL043C OCH1P31755 480 aa3.44□□□□□ -1.86
PRP11YDL043C GLC7P32598 312 aaKnown RBP3.44□□□□□ -1.86
PRP11YDL043C YEF1P32622 495 aa3.44□□□□□ -1.86
PRP11YDL043C TRS65P32893 560 aa3.44□□□□□ -1.86
PRP11YDL043C ASK1P35734 292 aa3.44□□□□□ -1.86
PRP11YDL043C ERV15P38312 142 aa3.44□□□□□ -1.86
PRP11YDL043C RCK1P38622 512 aa3.44□□□□□ -1.86
PRP11YDL043C TIR3P40552 269 aa3.44□□□□□ -1.86
PRP11YDL043C GLR1P41921 483 aaKnown RBP3.44□□□□□ -1.86
PRP11YDL043C ERJ5P43613 295 aaPredicted RBP3.44□□□□□ -1.86
PRP11YDL043C STE24P47154 453 aa3.44□□□□□ -1.86
PRP11YDL043C YDL186WP48568 277 aa3.44□□□□□ -1.86
PRP11YDL043C AVT4P50944 713 aa3.44□□□□□ -1.86
PRP11YDL043C ARO8P53090 500 aaKnown RBP3.44□□□□□ -1.86
PRP11YDL043C YGL101WP53144 215 aa3.44□□□□□ -1.86
PRP11YDL043C YNL184CP53876 108 aa3.44□□□□□ -1.86
PRP11YDL043C DAD3P69850 94 aa3.44□□□□□ -1.86
PRP11YDL043C ELC1Q03071 99 aa3.44□□□□□ -1.86
PRP11YDL043C AIM34Q03673 198 aa3.44□□□□□ -1.86
PRP11YDL043C HPT1Q04178 221 aaKnown RBP3.44□□□□□ -1.86
PRP11YDL043C TRM12Q04235 462 aa3.44□□□□□ -1.86
PRP11YDL043C YMR034CQ05131 434 aaPredicted RBP3.44□□□□□ -1.86
PRP11YDL043C TIM18Q08749 192 aa3.44□□□□□ -1.86
PRP11YDL043C USB1Q12208 290 aaKnown RBP3.44□□□□□ -1.86
PRP11YDL043C YOR029WQ12243 111 aa3.44□□□□□ -1.86
PRP11YDL043C TFC7Q12415 435 aa3.44□□□□□ -1.86
PRP11YDL043C YPR1Q12458 312 aa3.44□□□□□ -1.86
PRP11YDL043C RSF2P46974 1380 aa3.43□□□□□ -1.86
PRP11YDL043C VAR1P02381 398 aa3.43□□□□□ -1.86
PRP11YDL043C YFR010W-AP0C5N0 62 aa3.43□□□□□ -1.86
PRP11YDL043C HAP3P13434 144 aa3.43□□□□□ -1.86
PRP11YDL043C GCY1P14065 312 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
PRP11YDL043C YMR31P19955 123 aa3.43□□□□□ -1.86
PRP11YDL043C YSR3P23501 404 aa3.43□□□□□ -1.86
PRP11YDL043C PUT3P25502 979 aaPredicted RBP3.43□□□□□ -1.86
PRP11YDL043C PEX4P29340 183 aa3.43□□□□□ -1.86
PRP11YDL043C SRB6P32570 121 aa3.43□□□□□ -1.86
PRP11YDL043C SGE1P33335 543 aa3.43□□□□□ -1.86
PRP11YDL043C YET1P35723 206 aa3.43□□□□□ -1.86
PRP11YDL043C PAN3P36102 679 aaPredicted RBP3.43□□□□□ -1.86
PRP11YDL043C YBR056WP38081 501 aa3.43□□□□□ -1.86
PRP11YDL043C GOS1P38736 223 aa3.43□□□□□ -1.86
PRP11YDL043C ALP1P38971 573 aa3.43□□□□□ -1.86
PRP11YDL043C SMB1P40018 196 aaKnown RBP3.43□□□□□ -1.86
PRP11YDL043C RRG9P40156 214 aa3.43□□□□□ -1.86
PRP11YDL043C YNL194CP40169 301 aa3.43□□□□□ -1.86
PRP11YDL043C PRE6P40303 254 aaKnown RBP3.43□□□□□ -1.86
PRP11YDL043C BTT1P40314 149 aaPredicted RBP3.43□□□□□ -1.86
PRP11YDL043C MOB1P40484 314 aa3.43□□□□□ -1.86
PRP11YDL043C RRT5P43607 289 aa3.43□□□□□ -1.86
PRP11YDL043C MIC26P50087 233 aa3.43□□□□□ -1.86
PRP11YDL043C IBD2P53892 351 aa3.43□□□□□ -1.86
PRP11YDL043C YPL067CQ02754 198 aa3.43□□□□□ -1.86
PRP11YDL043C VPS28Q02767 242 aa3.43□□□□□ -1.86
PRP11YDL043C DIG1Q03063 452 aaKnown RBP3.43□□□□□ -1.86
PRP11YDL043C MAK3Q03503 176 aa3.43□□□□□ -1.86
PRP11YDL043C YMR310CQ04867 317 aaPredicted RBP3.43□□□□□ -1.86
PRP11YDL043C YLR281CQ05863 155 aa3.43□□□□□ -1.86
PRP11YDL043C LIP2Q06005 328 aa3.43□□□□□ -1.86
PRP11YDL043C GEP3Q08622 556 aa3.43□□□□□ -1.86
PRP11YDL043C YOR283WQ12040 230 aaKnown RBP3.43□□□□□ -1.86
PRP11YDL043C YDL199CQ12407 687 aa3.43□□□□□ -1.86
PRP11YDL043C YGL194C-AQ2V2P6 80 aa3.43□□□□□ -1.86
PRP11YDL043C UBA3Q99344 299 aa3.43□□□□□ -1.86
PRP11YDL043C YOR1P53049 1477 aa3.42□□□□□ -1.86
PRP11YDL043C ADK1P07170 222 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C RPS16AP0CX51 143 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C RPS16BP0CX52 143 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C ARF1P11076 181 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C POX1P13711 748 aa3.42□□□□□ -1.86
PRP11YDL043C GRX2P17695 143 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C MCK1P21965 375 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C SEC22P22214 214 aa3.42□□□□□ -1.86
PRP11YDL043C SEC17P32602 292 aa3.42□□□□□ -1.86
PRP11YDL043C RAD23P32628 398 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C TMT1P32643 299 aa3.42□□□□□ -1.86
PRP11YDL043C PAD1P33751 242 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
PRP11YDL043C SHE2P36068 246 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
PRP11YDL043C ARC40P38328 384 aaKnown RBP3.42□□□□□ -1.86
PRP11YDL043C MIC12P38341 106 aa3.42□□□□□ -1.86
PRP11YDL043C MST28P39552 234 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms