RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W SIR4P11978 1358 aa1.42□□□□□ -2.18
YCL020WYCL020W RSR1P13856 272 aa1.41□□□□□ -2.18
YCL020WYCL020W RNA15P25299 296 aaPredicted RBP1.41□□□□□ -2.18
YCL020WYCL020W BFR1P38934 470 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
YCL020WYCL020W GTR2P53290 341 aa1.41□□□□□ -2.18
YCL020WYCL020W CYT2Q00873 224 aa1.41□□□□□ -2.18
YCL020WYCL020W PRM15Q03262 622 aa1.41□□□□□ -2.18
YCL020WYCL020W FAR8Q05040 523 aa1.41□□□□□ -2.18
YCL020WYCL020W YPR172WQ06608 200 aa1.41□□□□□ -2.18
YCL020WYCL020W YCT1Q12235 531 aa1.41□□□□□ -2.18
YCL020WYCL020W BOL1Q3E793 110 aa1.41□□□□□ -2.18
YCL020WYCL020W INO80P53115 1489 aa1.41□□□□□ -2.18
YCL020WYCL020W IPP1P00817 287 aaKnown RBP1.4□□□□□ -2.18
YCL020WYCL020W PET100P38958 111 aa1.4□□□□□ -2.18
YCL020WYCL020W BNA6P43619 295 aa1.4□□□□□ -2.18
YCL020WYCL020W ATG39Q06159 398 aa1.4□□□□□ -2.18
YCL020WYCL020W YLR126CQ12288 251 aa1.4□□□□□ -2.18
YCL020WYCL020W CDC7P06243 507 aa1.4□□□□□ -2.19
YCL020WYCL020W FBA1P14540 359 aaKnown RBP1.4□□□□□ -2.19
YCL020WYCL020W YPT52P36018 234 aaKnown RBP1.4□□□□□ -2.19
YCL020WYCL020W PHO88P38264 188 aaPredicted RBP1.4□□□□□ -2.19
YCL020WYCL020W DOG1P38774 246 aa1.4□□□□□ -2.19
YCL020WYCL020W YHR127WP38833 243 aaKnown RBP1.4□□□□□ -2.19
YCL020WYCL020W YHR180WP38868 163 aa1.4□□□□□ -2.19
YCL020WYCL020W BMT5P40493 336 aa1.4□□□□□ -2.19
YCL020WYCL020W YJR079WP47126 109 aa1.4□□□□□ -2.19
YCL020WYCL020W YGR026WP53217 278 aa1.4□□□□□ -2.19
YCL020WYCL020W YMR279CQ03263 540 aa1.4□□□□□ -2.19
YCL020WYCL020W NIP7Q08962 181 aaKnown RBP1.4□□□□□ -2.19
YCL020WYCL020W YPL257WQ08974 193 aa1.4□□□□□ -2.19
YCL020WYCL020W FZO1P38297 855 aa1.39□□□□□ -2.19
YCL020WYCL020W YHR022CP38763 256 aa1.39□□□□□ -2.19
YCL020WYCL020W PEP8P40335 379 aa1.39□□□□□ -2.19
YCL020WYCL020W FIS1P40515 155 aa1.39□□□□□ -2.19
YCL020WYCL020W DAD3P69850 94 aa1.39□□□□□ -2.19
YCL020WYCL020W SEI1Q06058 285 aa1.39□□□□□ -2.19
YCL020WYCL020W OAC1P32332 324 aa1.38□□□□□ -2.19
YCL020WYCL020W MDH3P32419 343 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
YCL020WYCL020W YUH1P35127 236 aa1.38□□□□□ -2.19
YCL020WYCL020W PRM10P42946 383 aa1.38□□□□□ -2.19
YCL020WYCL020W RPA43P46669 326 aa1.38□□□□□ -2.19
YCL020WYCL020W YGR219WP53307 113 aa1.38□□□□□ -2.19
YCL020WYCL020W SNU23Q12368 194 aaPredicted RBP1.38□□□□□ -2.19
YCL020WYCL020W SNA3P14359 133 aa1.37□□□□□ -2.19
YCL020WYCL020W GRX2P17695 143 aaKnown RBP1.37□□□□□ -2.19
YCL020WYCL020W CAT5P41735 233 aa1.37□□□□□ -2.19
YCL020WYCL020W HOC1P47124 396 aa1.37□□□□□ -2.19
YCL020WYCL020W NEJ1Q06148 342 aa1.37□□□□□ -2.19
YCL020WYCL020W ARR2Q06597 130 aa1.37□□□□□ -2.19
YCL020WYCL020W ATG31Q12421 196 aa1.37□□□□□ -2.19
YCL020WYCL020W HTL1Q9URQ5 78 aa1.37□□□□□ -2.19
YCL020WYCL020W UBR2Q07963 1872 aa1.36□□□□□ -2.19
YCL020WYCL020W MSW1P04803 379 aa1.36□□□□□ -2.19
YCL020WYCL020W ERD2P18414 219 aa1.36□□□□□ -2.19
YCL020WYCL020W YAR068WP39564 161 aa1.36□□□□□ -2.19
YCL020WYCL020W GLE2P40066 365 aa1.36□□□□□ -2.19
YCL020WYCL020W HEM25Q07534 307 aa1.36□□□□□ -2.19
YCL020WYCL020W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
YCL020WYCL020W CSM4Q08955 156 aa1.36□□□□□ -2.19
YCL020WYCL020W RPL9AP05738 191 aaKnown RBP1.35□□□□□ -2.19
YCL020WYCL020W DDI2P0CH63 225 aa1.35□□□□□ -2.19
YCL020WYCL020W DDI3P0CH64 225 aa1.35□□□□□ -2.19
YCL020WYCL020W FCY2P17064 533 aa1.35□□□□□ -2.19
YCL020WYCL020W YKL075CP36083 450 aa1.35□□□□□ -2.19
YCL020WYCL020W YKR045CP36138 183 aa1.35□□□□□ -2.19
YCL020WYCL020W ECM33P38248 429 aaKnown RBP1.35□□□□□ -2.19
YCL020WYCL020W ERV15P38312 142 aa1.35□□□□□ -2.19
YCL020WYCL020W YBR219CP38317 127 aa1.35□□□□□ -2.19
YCL020WYCL020W YIL001WP40560 513 aa1.35□□□□□ -2.19
YCL020WYCL020W RPL9BP51401 191 aaKnown RBP1.35□□□□□ -2.19
YCL020WYCL020W RMR1P53060 241 aa1.35□□□□□ -2.19
YCL020WYCL020W CYR1P08678 2026 aaKnown RBP1.35□□□□□ -2.19
YCL020WYCL020W SPG3Q04398 127 aaPredicted RBP1.34□□□□□ -2.2
YCL020WYCL020W CFT1Q06632 1357 aaKnown RBP1.33□□□□□ -2.2
YCL020WYCL020W YOL162WP0CF19 215 aa1.33□□□□□ -2.2
YCL020WYCL020W RPF1P38805 295 aaKnown RBP1.33□□□□□ -2.2
YCL020WYCL020W YMR144WP40214 342 aaKnown RBP1.33□□□□□ -2.2
YCL020WYCL020W AGE2P40529 298 aa1.33□□□□□ -2.2
YCL020WYCL020W ERG25P53045 309 aa1.33□□□□□ -2.2
YCL020WYCL020W TRM12Q04235 462 aa1.33□□□□□ -2.2
YCL020WYCL020W YLR173WQ06247 608 aa1.33□□□□□ -2.2
YCL020WYCL020W PAM18Q07914 168 aa1.33□□□□□ -2.2
YCL020WYCL020W RIB1P38066 345 aa1.32□□□□□ -2.2
YCL020WYCL020W LDB7P38210 180 aa1.32□□□□□ -2.2
YCL020WYCL020W DSE2P38844 325 aa1.32□□□□□ -2.2
YCL020WYCL020W YKE4P40544 346 aa1.32□□□□□ -2.2
YCL020WYCL020W TOS8P53147 276 aa1.32□□□□□ -2.2
YCL020WYCL020W ERV29P53337 310 aa1.32□□□□□ -2.2
YCL020WYCL020W PET9P18239 318 aaKnown RBP1.31□□□□□ -2.2
YCL020WYCL020W MDH2P22133 377 aa1.31□□□□□ -2.2
YCL020WYCL020W YBR063CP38083 404 aa1.31□□□□□ -2.2
YCL020WYCL020W VTC1P40046 129 aaRIP-Chip data1.31□□□□□ -2.2not detected
YCL020WYCL020W YJR056CP47115 236 aa1.31□□□□□ -2.2
YCL020WYCL020W TRM9P49957 279 aa1.31□□□□□ -2.2
YCL020WYCL020W YNR062CP53748 327 aa1.31□□□□□ -2.2
YCL020WYCL020W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
YCL020WYCL020W CSI2Q08054 341 aa1.31□□□□□ -2.2
YCL020WYCL020W DCN1Q12395 269 aa1.31□□□□□ -2.2
YCL020WYCL020W FLO9P39712 1322 aa1.31□□□□□ -2.2
YCL020WYCL020W YPR170W-BP0C5R9 85 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms