RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	CDC28	P00546	298 aa	Known RBP	4.66	□□□□□ -1.66
UBC4	YBR082C	AAC1	P04710	309 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	MSI1	P13712	422 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	STF2	P16965	84 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	SAG1	P20840	650 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	MAK32	P23060	363 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	IFM1	P25038	676 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	CPR4	P25334	318 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	ACB1	P31787	87 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	REC114	P32841	428 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	CLB6	P32943	380 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	MRPL36	P36531	177 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	NAT2	P37293	288 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	COS8	P38723	381 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	ARO9	P38840	513 aa	Predicted RBP	4.66	□□□□□ -1.66
UBC4	YBR082C	SEN34	P39707	275 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	MID1	P41821	548 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	YGR210C	P42942	411 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	YJR011C	P47086	261 aa	Predicted RBP	4.66	□□□□□ -1.66
UBC4	YBR082C	SSN8	P47821	323 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	OKP1	P53298	406 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	ACS1	Q01574	713 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	HAS1	Q03532	505 aa	Known RBP	4.66	□□□□□ -1.66
UBC4	YBR082C	CAB5	Q03941	241 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	CRR1	Q05790	422 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	COA4	Q05809	96 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	YLR224W	Q05947	369 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	YPR098C	Q06089	161 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	YNG1	Q08465	219 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	YOR186W	Q08560	144 aa		4.66	□□□□□ -1.66
UBC4	YBR082C	RRS1	Q08746	203 aa	Known RBP	4.66	□□□□□ -1.66
UBC4	YBR082C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.66	□□□□□ -1.66
UBC4	YBR082C	SEC16	P48415	2195 aa	Known RBP	4.65	□□□□□ -1.66
UBC4	YBR082C	MET3	P08536	511 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	YLL053C	P0CD98	152 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	PET122	P10355	254 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	YCR101C	P25607	182 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	SUA5	P32579	426 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	GLC7	P32598	312 aa	Known RBP	4.65	□□□□□ -1.67
UBC4	YBR082C	FLO10	P36170	1169 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	POP8	P38208	133 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	FIG1	P38224	298 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	GPI16	P38875	610 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
UBC4	YBR082C	YER079W	P40052	210 aa	Known RBP	4.65	□□□□□ -1.67
UBC4	YBR082C	SWM2	P40342	146 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	OST1	P41543	476 aa	Known RBP	4.65	□□□□□ -1.67
UBC4	YBR082C	ECM27	P47144	725 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	UBC13	P52490	153 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	SMX3	P54999	86 aa	Predicted RBP	4.65	□□□□□ -1.67
UBC4	YBR082C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
UBC4	YBR082C	SYM1	Q06563	197 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	NCE102	Q12207	173 aa	RIP-Chip data	4.65	□□□□□ -1.67	not detected
UBC4	YBR082C	MED4	Q12343	284 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	EAF3	Q12432	401 aa		4.65	□□□□□ -1.67
UBC4	YBR082C	MAG1	P22134	296 aa	Known RBP	4.64	□□□□□ -1.67
UBC4	YBR082C	YCR016W	P25617	290 aa	Known RBP	4.64	□□□□□ -1.67
UBC4	YBR082C	PEX4	P29340	183 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	GLY1	P37303	387 aa	Known RBP	4.64	□□□□□ -1.67
UBC4	YBR082C	YBR197C	P38306	217 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	LAG1	P38703	411 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	PHM8	P40025	321 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	GWT1	P47026	490 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	JAC1	P53193	184 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	YDC1	Q02896	317 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	PRM15	Q03262	622 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	DLT1	Q04216	342 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	PIN3	Q06449	215 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	SCP1	Q08873	200 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	VAM3	Q12241	283 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	UBA3	Q99344	299 aa		4.64	□□□□□ -1.67
UBC4	YBR082C	CDC39	P25655	2108 aa	Known RBP	4.63	□□□□□ -1.67
UBC4	YBR082C	PUT1	P09368	476 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	CKS1	P20486	150 aa	Known RBP	4.63	□□□□□ -1.67
UBC4	YBR082C	VMA8	P32610	256 aa	Known RBP	4.63	□□□□□ -1.67
UBC4	YBR082C	AGA2	P32781	87 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	PRS2	P38620	318 aa	Known RBP	4.63	□□□□□ -1.67
UBC4	YBR082C	AIM46	P38885	310 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	EGT2	P42835	1041 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	YFL051C	P43552	160 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	MRX5	P47007	382 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	UBP8	P50102	471 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	YIP5	P53108	310 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	ORM1	P53224	222 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	YMR254C	Q04838	102 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	RTT103	Q05543	409 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	FEX1	Q08913	375 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	FEX2	Q08991	375 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	RTR2	Q12378	196 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	YGL194C-A	Q2V2P6	80 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	YBR298C-A	Q8TGK4	73 aa		4.63	□□□□□ -1.67
UBC4	YBR082C	TPI1	P00942	248 aa	Known RBP	4.62	□□□□□ -1.67
UBC4	YBR082C	GAL1	P04385	528 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	CKA1	P15790	372 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	SEN2	P16658	377 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	OLE1	P21147	510 aa	Known RBP	4.62	□□□□□ -1.67
UBC4	YBR082C	TRR1	P29509	319 aa	Known RBP	4.62	□□□□□ -1.67
UBC4	YBR082C	OCH1	P31755	480 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	YBR220C	P38318	560 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms