RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C ARR2Q06597 130 aa5.63□□□□□ -1.51
LDB7YBL006C TY1A-BRQ12217 440 aa5.63□□□□□ -1.51
LDB7YBL006C TY1A-NL2Q12470 440 aa5.63□□□□□ -1.51
LDB7YBL006C TY1A-GR2Q12485 440 aa5.63□□□□□ -1.51
LDB7YBL006C RPL25P04456 142 aaKnown RBP5.62□□□□□ -1.51
LDB7YBL006C ATP10P18496 279 aa5.62□□□□□ -1.51
LDB7YBL006C SUA7P29055 345 aaPredicted RBP5.62□□□□□ -1.51
LDB7YBL006C ERG24P32462 438 aaKnown RBP5.62□□□□□ -1.51
LDB7YBL006C PAU2P32612 120 aa5.62□□□□□ -1.51
LDB7YBL006C SOR1P35497 357 aaKnown RBP5.62□□□□□ -1.51
LDB7YBL006C SFK1P35735 353 aa5.62□□□□□ -1.51
LDB7YBL006C SWD2P36104 329 aaPredicted RBP5.62□□□□□ -1.51
LDB7YBL006C ADH5P38113 351 aaKnown RBP5.62□□□□□ -1.51
LDB7YBL006C SSZ1P38788 538 aaKnown RBP5.62□□□□□ -1.51
LDB7YBL006C MSS2P40990 351 aa5.62□□□□□ -1.51
LDB7YBL006C YDL186WP48568 277 aa5.62□□□□□ -1.51
LDB7YBL006C SCW4P53334 386 aaKnown RBP5.62□□□□□ -1.51
LDB7YBL006C ECM18Q04623 453 aa5.62□□□□□ -1.51
LDB7YBL006C YLR283WQ05867 314 aa5.62□□□□□ -1.51
LDB7YBL006C LIP2Q06005 328 aa5.62□□□□□ -1.51
LDB7YBL006C SOR2Q07786 357 aa5.62□□□□□ -1.51
LDB7YBL006C RFM1Q12192 310 aa5.62□□□□□ -1.51
LDB7YBL006C YER190C-BP0CX94 160 aa5.61□□□□□ -1.51
LDB7YBL006C YEL077W-AP0CX95 160 aa5.61□□□□□ -1.51
LDB7YBL006C YGR296C-BP0CX96 160 aa5.61□□□□□ -1.51
LDB7YBL006C YPL283W-BP0CX97 160 aa5.61□□□□□ -1.51
LDB7YBL006C YPR204C-AP0CX98 160 aa5.61□□□□□ -1.51
LDB7YBL006C YFL068WP0CX99 160 aa5.61□□□□□ -1.51
LDB7YBL006C YLL066W-AP0CY00 160 aa5.61□□□□□ -1.51
LDB7YBL006C YLL067W-AP0CY01 160 aa5.61□□□□□ -1.51
LDB7YBL006C PET122P10355 254 aa5.61□□□□□ -1.51
LDB7YBL006C CCZ1P38273 704 aa5.61□□□□□ -1.51
LDB7YBL006C PSD1P39006 500 aa5.61□□□□□ -1.51
LDB7YBL006C YFL015CP43578 164 aa5.61□□□□□ -1.51
LDB7YBL006C BNA1P47096 177 aa5.61□□□□□ -1.51
LDB7YBL006C OKP1P53298 406 aa5.61□□□□□ -1.51
LDB7YBL006C RPL21AQ02753 160 aaKnown RBP5.61□□□□□ -1.51
LDB7YBL006C RPL21BQ12672 160 aaKnown RBP5.61□□□□□ -1.51
LDB7YBL006C YLR099W-AQ3E798 87 aa5.61□□□□□ -1.51
LDB7YBL006C YGR035W-AQ45U48 73 aa5.61□□□□□ -1.51
LDB7YBL006C ATG22P25568 528 aa5.6□□□□□ -1.51
LDB7YBL006C AHC2P25649 128 aa5.6□□□□□ -1.51
LDB7YBL006C ARO4P32449 370 aaKnown RBP5.6□□□□□ -1.51
LDB7YBL006C PRS2P38620 318 aaKnown RBP5.6□□□□□ -1.51
LDB7YBL006C AGE2P40529 298 aa5.6□□□□□ -1.51
LDB7YBL006C YGR045CP53229 120 aa5.6□□□□□ -1.51
LDB7YBL006C VAM3Q12241 283 aa5.6□□□□□ -1.51
LDB7YBL006C RBD2Q12270 262 aa5.6□□□□□ -1.51
LDB7YBL006C BBP1Q12365 385 aa5.6□□□□□ -1.51
LDB7YBL006C YEL009C-AA0A023PZF2 135 aa5.59□□□□□ -1.51
LDB7YBL006C QCR7P00128 127 aa5.59□□□□□ -1.51
LDB7YBL006C FUR4P05316 633 aaKnown RBP5.59□□□□□ -1.51
LDB7YBL006C MTC7P32633 139 aa5.59□□□□□ -1.51
LDB7YBL006C YKL063CP35725 167 aa5.59□□□□□ -1.51
LDB7YBL006C FIG1P38224 298 aa5.59□□□□□ -1.51
LDB7YBL006C UMP1P38293 148 aa5.59□□□□□ -1.51
LDB7YBL006C AIM46P38885 310 aa5.59□□□□□ -1.51
LDB7YBL006C DOC1P53068 250 aa5.59□□□□□ -1.51
LDB7YBL006C YGR054WP53235 642 aaKnown RBP5.59□□□□□ -1.51
LDB7YBL006C MAK3Q03503 176 aa5.59□□□□□ -1.51
LDB7YBL006C ATG40Q99325 256 aa5.59□□□□□ -1.51
LDB7YBL006C MET17P06106 444 aa5.58□□□□□ -1.52
LDB7YBL006C CDC31P06704 161 aaKnown RBP5.58□□□□□ -1.52
LDB7YBL006C RAD52P06778 471 aaKnown RBP5.58□□□□□ -1.52
LDB7YBL006C PET18P25362 215 aa5.58□□□□□ -1.52
LDB7YBL006C CPR5P35176 225 aa5.58□□□□□ -1.52
LDB7YBL006C CUE1P38428 203 aa5.58□□□□□ -1.52
LDB7YBL006C PAC2P39937 518 aa5.58□□□□□ -1.52
LDB7YBL006C AVT6P40074 448 aa5.58□□□□□ -1.52
LDB7YBL006C CCS1P40202 249 aaKnown RBP5.58□□□□□ -1.52
LDB7YBL006C RPS0BP46654 252 aaKnown RBP5.58□□□□□ -1.52
LDB7YBL006C GWT1P47026 490 aa5.58□□□□□ -1.52
LDB7YBL006C YAE1P47118 141 aaPredicted RBP5.58□□□□□ -1.52
LDB7YBL006C TTI2P47168 421 aa5.58□□□□□ -1.52
LDB7YBL006C YGL262WP53054 175 aa5.58□□□□□ -1.52
LDB7YBL006C RRP17Q04031 235 aaPredicted RBP5.58□□□□□ -1.52
LDB7YBL006C NEJ1Q06148 342 aa5.58□□□□□ -1.52
LDB7YBL006C ATG17Q06410 417 aa5.58□□□□□ -1.52
LDB7YBL006C TIR4Q12218 487 aaPredicted RBP5.58□□□□□ -1.52
LDB7YBL006C WHI5Q12416 295 aa5.58□□□□□ -1.52
LDB7YBL006C ARO7P32178 256 aa5.57□□□□□ -1.52
LDB7YBL006C CBT1P36038 271 aaPredicted RBP5.57□□□□□ -1.52
LDB7YBL006C GOS1P38736 223 aa5.57□□□□□ -1.52
LDB7YBL006C PDS1P40316 373 aaPredicted RBP5.57□□□□□ -1.52
LDB7YBL006C HSK3P69852 69 aa5.57□□□□□ -1.52
LDB7YBL006C NGL2Q03264 515 aaKnown RBP5.57□□□□□ -1.52
LDB7YBL006C MIX17Q03667 156 aa5.57□□□□□ -1.52
LDB7YBL006C YPR071WQ12346 211 aa5.57□□□□□ -1.52
LDB7YBL006C GCN4P03069 281 aa5.56□□□□□ -1.52
LDB7YBL006C ILV5P06168 395 aaKnown RBP5.56□□□□□ -1.52
LDB7YBL006C BGL2P15703 313 aaKnown RBP5.56□□□□□ -1.52
LDB7YBL006C YCR101CP25607 182 aa5.56□□□□□ -1.52
LDB7YBL006C PRE4P30657 266 aa5.56□□□□□ -1.52
LDB7YBL006C VMA6P32366 345 aaKnown RBP5.56□□□□□ -1.52
LDB7YBL006C YBL010CP32788 280 aa5.56□□□□□ -1.52
LDB7YBL006C YJL218WP40892 196 aaKnown RBP5.56□□□□□ -1.52
LDB7YBL006C GNA1P43577 159 aaPredicted RBP5.56□□□□□ -1.52
LDB7YBL006C HNT2P49775 206 aa5.56□□□□□ -1.52
LDB7YBL006C IMO32P53219 342 aa5.56□□□□□ -1.52
LDB7YBL006C BUD25P85052 153 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms