RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 FZD7O75084 574 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 MMP1P03956 469 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 TSPY3P0CV98 308 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 TSPY8P0CW00 308 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 CCDC192P0DO97 292 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 CYP2D6P10635 497 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 RXRAP19793 462 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 CMA1P23946 247 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SMARCA1P28370 1054 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SOX9P48436 509 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 RHBDL3P58872 404 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 NKX3-2P78367 333 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 CEBPZQ03701 1054 aaKnown RBP5.08□□□□□ -1.6
SRP54-212ENST00000556992 RILPL1Q5EBL4 403 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 FAM47AQ5JRC9 791 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SOGA3Q5TF21 947 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 ANO1Q5XXA6 986 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 OTUD7BQ6GQQ9 843 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SASS6Q6UVJ0 657 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 CCDC73Q6ZRK6 1079 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 ARHGEF18Q6ZSZ5 1173 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 C16orf86Q6ZW13 317 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 NOSTRINQ8IVI9 506 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 MAPKAPK5Q8IW41 473 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 CCAR1Q8IX12 1150 aaKnown RBP5.08□□□□□ -1.6
SRP54-212ENST00000556992 FAM169BQ8N8A8 192 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 LINC00301Q8NCQ3 95 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 BVESQ8NE79 360 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 NPLOC4Q8TAT6 608 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 BTN2A2Q8WVV5 523 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 TRMT2BQ96GJ1 504 aaKnown RBP5.08□□□□□ -1.6
SRP54-212ENST00000556992 PGBD1Q96JS3 809 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 USP28Q96RU2 1077 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SYT17Q9BSW7 474 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 MYL10Q9BUA6 226 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 TMEM168Q9H0V1 697 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 NUP62CLQ9H1M0 184 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 PCED1AQ9H1Q7 454 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 TNMDQ9H2S6 317 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 DHX36Q9H2U1 1008 aaKnown RBP5.08□□□□□ -1.6
SRP54-212ENST00000556992 CLSTN2Q9H4D0 955 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 PCDH18Q9HCL0 1135 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SH3GLB2Q9NR46 395 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 DACT1Q9NYF0 836 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 SWAP70Q9UH65 585 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 NHSQ6T4R5 1651 aa5.08□□□□□ -1.6
SRP54-212ENST00000556992 COL1A1P02452 1464 aaPredicted RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 KINO60870 393 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 PPP6R2O75170 966 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 BMP15O95972 392 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 TOP1P11387 765 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 LCP1P13796 627 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 CALML3P27482 149 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 ECI1P42126 302 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 SLC6A11P48066 632 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 MMP14P50281 582 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 PLCD1P51178 756 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 PPP2CBP62714 309 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 RPL11P62913 178 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 PPP2CAP67775 309 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 CCDC173Q0VFZ6 552 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 SF1Q15637 639 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 PRSS53Q2L4Q9 553 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 GALNT17Q6IS24 598 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 APOBEC3HQ6NTF7 200 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 TMTC3Q6ZXV5 915 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 FOXP4Q8IVH2 680 aaPredicted RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 DIS3L2Q8IYB7 885 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 DNAJC5GQ8N7S2 189 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 C19orf47Q8N9M1 422 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 DNERQ8NFT8 737 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 MRPS27Q92552 414 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 TRIM44Q96DX7 344 aaPredicted RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 DYNLL2Q96FJ2 89 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 SHDQ96IW2 340 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 CCDC17Q96LX7 622 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 PPP1R9BQ96SB3 815 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 SDF4Q9BRK5 362 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 IL17RBQ9NRM6 502 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 SAP30BPQ9UHR5 308 aaKnown RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 PCDHA7Q9UN72 937 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 TIMM13Q9Y5L4 95 aaPredicted RBP5.07□□□□□ -1.6
SRP54-212ENST00000556992 CLIC4Q9Y696 253 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 BRWD3Q6RI45 1802 aa5.07□□□□□ -1.6
SRP54-212ENST00000556992 C4BP0C0L5 1744 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 FLT1P17948 1338 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 TRIM75PA6NK02 468 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 BTBD18B2RXH4 712 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 KIF28PB7ZC32 967 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 SMIM22K7EJ46 135 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 NMT2O60551 498 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 CUTAO60888 179 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 HLA-DOAP06340 250 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 SCG2P13521 617 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 POLD1P28340 1107 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 CHRNA5P30532 468 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 GUCY1A2P33402 732 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 KRT2P35908 639 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 TRAPPC10P48553 1259 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms