RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 ABLIM1O14639 778 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 SLC16A4O15374 487 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
RTCB-202ENST00000463455 PDIA4P13667 645 aaKnown RBP13.03□□□□□ -0.32
RTCB-202ENST00000463455 KCNE1P15382 129 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 ZNF131P52739 623 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 NCKAP1LP55160 1127 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.32
RTCB-202ENST00000463455 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
RTCB-202ENST00000463455 UPP1Q16831 310 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 DCLRE1AQ6PJP8 1040 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 TMC5Q6UXY8 1006 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 HFE2Q6ZVN8 426 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 C12orf76Q8N812 135 aaPredicted RBP13.03□□□□□ -0.32
RTCB-202ENST00000463455 RIN2Q8WYP3 895 aaPredicted RBP13.03□□□□□ -0.32
RTCB-202ENST00000463455 STAMQ92783 540 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 FAM122AQ96E09 287 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 SNX27Q96L92 541 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 ACAP3Q96P50 834 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 TSPAN18Q96SJ8 248 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 PRRX2Q99811 253 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 PAAF1Q9BRP4 392 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 POLD4Q9HCU8 107 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
RTCB-202ENST00000463455 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 USP20Q9Y2K6 914 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 CITO14578 2027 aa13.03□□□□□ -0.32
RTCB-202ENST00000463455 PLXNA3P51805 1871 aa13.02□□□□□ -0.32
RTCB-202ENST00000463455 TRIP11Q15643 1979 aa13.02□□□□□ -0.32
RTCB-202ENST00000463455 SMIM28A0A1B0GU29 152 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 VPS37CA5D8V6 355 aaPredicted RBP13.02□□□□□ -0.33
RTCB-202ENST00000463455 TGM5O43548 720 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 B3GAT3O94766 335 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 POU2F2P09086 479 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 HOXA9P31269 272 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 MCL1Q07820 350 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 ARSHQ5FYA8 562 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 FAM171A1Q5VUB5 890 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 LNX1Q8TBB1 728 aaPredicted RBP13.02□□□□□ -0.33
RTCB-202ENST00000463455 LARP4BQ92615 738 aaKnown RBP13.02□□□□□ -0.33
RTCB-202ENST00000463455 TCHPQ9BT92 498 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 ZSCAN16Q9H4T2 348 aaPredicted RBP13.02□□□□□ -0.33
RTCB-202ENST00000463455 PLEKHA5Q9HAU0 1116 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 PARVGQ9HBI0 331 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 WDR6Q9NNW5 1121 aaKnown RBP13.02□□□□□ -0.33
RTCB-202ENST00000463455 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
RTCB-202ENST00000463455 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 CCDC195A0A1B0GUA6 201 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
RTCB-202ENST00000463455 CLDN3O15551 220 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 FAM13AO94988 1023 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 PIGRP01833 764 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 HNRNPA1P09651 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTCB-202ENST00000463455 PLCG1P19174 1290 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 SYT1P21579 422 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 FGFR3P22607 806 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 RPL9P32969 192 aaKnown RBP13.01□□□□□ -0.33
RTCB-202ENST00000463455 PTPAQ15257 358 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 PSMD5Q16401 504 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 GPBP1Q86WP2 473 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 SUGP1Q8IWZ8 645 aaKnown RBP13.01□□□□□ -0.33
RTCB-202ENST00000463455 CEP120Q8N960 986 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 KREMEN2Q8NCW0 462 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 RASSF8Q8NHQ8 419 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 RAD54LQ92698 747 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 NXPE3Q969Y0 559 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 ASIC4Q96FT7 647 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 CLSTN3Q9BQT9 956 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 REEP2Q9BRK0 252 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 PRKD2Q9BZL6 878 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 BLOC1S4Q9NUP1 217 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 SRPRBQ9Y5M8 271 aaKnown RBP13.01□□□□□ -0.33
RTCB-202ENST00000463455 BACE2Q9Y5Z0 518 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 CLUHO75153 1309 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 TRIOO75962 3097 aa13.01□□□□□ -0.33
RTCB-202ENST00000463455 MYO10Q9HD67 2058 aa13□□□□□ -0.33
RTCB-202ENST00000463455 VWA8A3KMH1 1905 aa13□□□□□ -0.33
RTCB-202ENST00000463455 SYN3O14994 580 aa13□□□□□ -0.33
RTCB-202ENST00000463455 ZMYND10O75800 440 aa13□□□□□ -0.33
RTCB-202ENST00000463455 CLTAP09496 248 aa13□□□□□ -0.33
RTCB-202ENST00000463455 WEE2P0C1S8 567 aa13□□□□□ -0.33
RTCB-202ENST00000463455 DDIT3P35638 169 aa13□□□□□ -0.33
RTCB-202ENST00000463455 TXLNAP40222 546 aa13□□□□□ -0.33
RTCB-202ENST00000463455 CLCNKBP51801 687 aa13□□□□□ -0.33
RTCB-202ENST00000463455 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
RTCB-202ENST00000463455 RESTQ13127 1097 aa13□□□□□ -0.33
RTCB-202ENST00000463455 RAB33AQ14088 237 aa13□□□□□ -0.33
RTCB-202ENST00000463455 UVSSAQ2YD98 709 aa13□□□□□ -0.33
RTCB-202ENST00000463455 GLRA4Q5JXX5 417 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms