RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 CLTAP09496 248 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 NCAM1P13591 858 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 CDH6P55285 790 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 ROR1Q01973 937 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 RCN2Q14257 317 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PPM1LQ5SGD2 360 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 NECAB2Q7Z6G3 386 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 RNF10Q8N5U6 811 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 TDRD7Q8NHU6 1098 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 DDX56Q9NY93 547 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 PCDHGB4Q9UN71 923 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PCDHA13Q9Y5I0 950 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 IGSF9BQ9UPX0 1349 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PNPLA6Q8IY17 1366 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 EXOC1LA0A1B0GW35 172 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 CARNS1A5YM72 827 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 RPL10AP62906 217 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 FBXO33Q7Z6M2 555 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 USP31Q70CQ4 1352 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 C3P01024 1663 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 VCAM1P19320 739 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 NCF2P19878 526 aaPredicted RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 ACTR2P61160 394 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PDIA6Q15084 440 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 ATP6V0D2Q8N8Y2 350 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PPHLN1Q8NEY8 458 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 PSMD3O43242 534 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 EIF4A3P38919 411 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 FSCN1Q16658 493 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 RASSF3Q86WH2 238 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 CHSY1Q86X52 802 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 USP13Q92995 863 aaPredicted RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 CABS1Q96KC9 395 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PNMA5Q96PV4 448 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 DLC1Q96QB1 1528 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 NDUFS3O75489 264 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 HIST1H2AGP0C0S8 130 aaPredicted RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 MYBL1P10243 752 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 HIST1H2ADP20671 130 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PPP3CCP48454 512 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 BCAR1P56945 870 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 ZNF746Q6NUN9 644 aaPredicted RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 HERC6Q8IVU3 1022 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 TMCO5AQ8N6Q1 288 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 HIST1H2AHQ96KK5 128 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 HIST1H2AJQ99878 128 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 H2AFJQ9BTM1 129 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 MYH9P35579 1960 aaKnown RBP10.51□□□□□ -0.73
FN1-209ENST00000432072 HOXC6P09630 235 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 TAF6P49848 677 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 SBK1Q52WX2 424 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.51□□□□□ -0.731e-323■■■□□ 15.1
FN1-209ENST00000432072 ABHD8Q96I13 439 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 CIPCQ9C0C6 399 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 PKP3Q9Y446 797 aa10.51□□□□□ -0.73
FN1-209ENST00000432072 TLL1O43897 1013 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 PCDH8O95206 1070 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 NDUFV1P49821 464 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 PLTPP55058 493 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 TRIM59Q8IWR1 403 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 LINC00301Q8NCQ3 95 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 CFAP61Q8NHU2 1237 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 HASPINQ8TF76 798 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 AKT1S1Q96B36 256 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 CYP4F11Q9HBI6 524 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 C6orf203Q9P0P8 240 aaPredicted RBP10.5□□□□□ -0.73
FN1-209ENST00000432072 TEKT2Q9UIF3 430 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 PPP2R2CQ9Y2T4 447 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 CFAP99D6REC4 459 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 RASGRF2O14827 1237 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 CAND2O75155 1236 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 DEUP1Q05D60 604 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
FN1-209ENST00000432072 CDCA5Q96FF9 252 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 DPP3Q9NY33 737 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 SLC30A1Q9Y6M5 507 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 LTN1O94822 1766 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 AMHR2Q16671 573 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 LMBRD2Q68DH5 695 aaPredicted RBP10.5□□□□□ -0.73
FN1-209ENST00000432072 NFRKBQ6P4R8 1299 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 TSEN34Q9BSV6 310 aaKnown RBP10.5□□□□□ -0.73
FN1-209ENST00000432072 ABHD16BQ9H3Z7 469 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
FN1-209ENST00000432072 PCDHB9Q9Y5E1 797 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 EIF3DO15371 548 aaKnown RBP eCLIP10.5□□□□□ -0.73
FN1-209ENST00000432072 CTNNB1P35222 781 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 PID1Q7Z2X4 250 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 SLC26A7Q8TE54 656 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 PPP1R2P1Q96PQ5 205 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 NR1H4Q96RI1 486 aaPredicted RBP10.5□□□□□ -0.73
FN1-209ENST00000432072 AP3B1O00203 1094 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 ATG16L1Q676U5 607 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 RGMBQ6NW40 437 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 PKN3Q6P5Z2 889 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 ZNF438Q7Z4V0 828 aa10.5□□□□□ -0.73
FN1-209ENST00000432072 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
FN1-209ENST00000432072 GIPC2Q8TF65 315 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms