RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.07■□□□□ 0.32
CCDC107-204ENST00000378409 VSTM4Q8IW00 320 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 ANKRD36BP1Q96IX9 119 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 CXCL16Q9H2A7 254 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 GCNT4Q9P109 453 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 CNTN3Q9P232 1028 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 FNDC1Q4ZHG4 1894 aaPredicted RBP17.07■□□□□ 0.32
CCDC107-204ENST00000378409 A0A1W2PQC6 194 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 P4HA2O15460 535 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 KLK7P49862 253 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 AP3M2P53677 418 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 CETN1Q12798 172 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 EXOC3L4Q17RC7 722 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 DUOXA2Q1HG44 320 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 TDRD10Q5VZ19 366 aaKnown RBP17.06■□□□□ 0.32
CCDC107-204ENST00000378409 ALKAL1Q6UXT8 129 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 AGMOQ6ZNB7 445 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 SV2AQ7L0J3 742 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 ZNF598Q86UK7 904 aaKnown RBP17.06■□□□□ 0.32
CCDC107-204ENST00000378409 SPC24Q8NBT2 197 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 CACTINQ8WUQ7 758 aaKnown RBP17.06■□□□□ 0.32
CCDC107-204ENST00000378409 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 RPS6KC1Q96S38 1066 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 GIT1Q9Y2X7 761 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 C2CD2Q9Y426 696 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
CCDC107-204ENST00000378409 SCN1AP35498 2009 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 GTPBP10A4D1E9 387 aaKnown RBP17.05■□□□□ 0.32
CCDC107-204ENST00000378409 PHACTR2O75167 634 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 C4BPAP04003 597 aaKnown RBP17.05■□□□□ 0.32
CCDC107-204ENST00000378409 ACRP10323 421 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 MLH1P40692 756 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 FAM189BP81408 668 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 KCNMA1Q12791 1236 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 IKBKEQ14164 716 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 ZACNQ401N2 412 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 SPECC1LQ69YQ0 1117 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 C15orf39Q6ZRI6 1047 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 NT5DC4Q86YG4 428 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 RPUSD2Q8IZ73 545 aaKnown RBP17.05■□□□□ 0.32
CCDC107-204ENST00000378409 FBXL13Q8NEE6 735 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 TAS1R2Q8TE23 839 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 BADQ92934 168 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 ZMAT2Q96NC0 199 aaKnown RBP17.05■□□□□ 0.32
CCDC107-204ENST00000378409 GAD1Q99259 594 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 LSM14BQ9BX40 385 aaKnown RBP17.05■□□□□ 0.32
CCDC107-204ENST00000378409 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 DERAQ9Y315 318 aa17.05■□□□□ 0.32
CCDC107-204ENST00000378409 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
CCDC107-204ENST00000378409 ARL5CA6NH57 179 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 PMM2O15305 246 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 EOMESO95936 686 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 HLA-DRAP01903 254 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 PFKMP08237 780 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 SYN1P17600 705 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 SLC9A1P19634 815 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 PIK3CAP42336 1068 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 EPC2Q52LR7 807 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 TRAPPC11Q7Z392 1133 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 DPF3Q92784 378 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 TSPAN18Q96SJ8 248 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 INTS2Q9H0H0 1204 aaKnown RBP17.04■□□□□ 0.32
CCDC107-204ENST00000378409 IL23AQ9NPF7 189 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
CCDC107-204ENST00000378409 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 LRFN2Q9ULH4 789 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 PCDHB7Q9Y5E2 793 aa17.04■□□□□ 0.32
CCDC107-204ENST00000378409 SMIM28A0A1B0GU29 152 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 PTGESO14684 152 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 XPOTO43592 962 aaKnown RBP17.03■□□□□ 0.32
CCDC107-204ENST00000378409 CLSTN1O94985 981 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 KCNE1P15382 129 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 PON1P27169 355 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 GUCY2FP51841 1108 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 FPGSQ05932 587 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCDC107-204ENST00000378409 TMEM130Q8N3G9 435 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 EHBP1Q8NDI1 1231 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 BEST2Q8NFU1 509 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 NEK11Q8NG66 645 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 SEMA4DQ92854 862 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 C18orf25Q96B23 403 aaPredicted RBP17.03■□□□□ 0.32
CCDC107-204ENST00000378409 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
CCDC107-204ENST00000378409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.327e-8■■■■■ 186.3
CCDC107-204ENST00000378409 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 TUBGCP4Q9UGJ1 667 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 ZMYND8Q9ULU4 1186 aaPredicted RBP17.03■□□□□ 0.32
CCDC107-204ENST00000378409 UBQLN1Q9UMX0 589 aaKnown RBP17.03■□□□□ 0.32
CCDC107-204ENST00000378409 INPP5FQ9Y2H2 1132 aa17.03■□□□□ 0.32
CCDC107-204ENST00000378409 COQ4Q9Y3A0 265 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms