RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TRIM7Q9C029 511 aa15.54■□□□□ 0.08
MSH5-201ENST00000375703 NSRP1Q9H0G5 558 aaKnown RBP15.54■□□□□ 0.08
MSH5-201ENST00000375703 SLC38A10Q9HBR0 1119 aa15.54■□□□□ 0.08
MSH5-201ENST00000375703 GOLGB1Q14789 3259 aaKnown RBP15.54■□□□□ 0.08
MSH5-201ENST00000375703 DNAJC8O75937 253 aaPredicted RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 UNGP13051 313 aaPredicted RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 CHKAP35790 457 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 GCNT1Q02742 428 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 TRIP13Q15645 432 aaPredicted RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 RHBDF2Q6PJF5 856 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 GPD1LQ8N335 351 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 DYDC1Q8WWB3 177 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 SPIRE2Q8WWL2 714 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 ARHGEF2Q92974 986 aaKnown RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 CEP170P1Q96L14 293 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 FAM81BQ96LP2 452 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 PDCD2LQ9BRP1 358 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.53■□□□□ 0.08
MSH5-201ENST00000375703 CTDP1Q9Y5B0 961 aaPredicted RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 HSPA1LP34931 641 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 SNCBQ16143 134 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 ARHGEF16Q5VV41 709 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 SYDE1Q6ZW31 735 aaPredicted RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 LARGE2Q8N3Y3 721 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 GRK7Q8WTQ7 553 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 FAM213AQ9BRX8 229 aa15.53■□□□□ 0.08
MSH5-201ENST00000375703 A1CFQ9NQ94 594 aaKnown RBP15.53■□□□□ 0.08
MSH5-201ENST00000375703 CHRM1P11229 460 aaPredicted RBP15.52■□□□□ 0.08
MSH5-201ENST00000375703 RRM1P23921 792 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 IVDP26440 423 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 MAN1A1P33908 653 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 SLC1A1P43005 524 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 ITGA8P53708 1063 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 DGKZQ13574 1117 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 CCDC50Q8IVM0 306 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 SAMD3Q8N6K7 520 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 ATL2Q8NHH9 583 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 MGARPQ8TDB4 240 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 LPAR1Q92633 364 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 ZKSCAN4Q969J2 545 aaPredicted RBP15.52■□□□□ 0.08
MSH5-201ENST00000375703 MOV10L1Q9BXT6 1211 aaKnown RBP15.52■□□□□ 0.08
MSH5-201ENST00000375703 AVENQ9NQS1 362 aaPredicted RBP15.52■□□□□ 0.08
MSH5-201ENST00000375703 PXMP2Q9NR77 195 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 PCDHA10Q9Y5I2 948 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 MROH7Q68CQ1 1323 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 HNRNPDLO14979 420 aaKnown RBP15.52■□□□□ 0.08
MSH5-201ENST00000375703 TTC4O95801 387 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 GAS8O95995 478 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 ADCY8P40145 1251 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 MAP3K10Q02779 954 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 PTK6Q13882 451 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 LRRC14Q15048 493 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 KYNUQ16719 465 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 NLRX1Q86UT6 975 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 BICD1Q96G01 975 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 DCLK3Q9C098 648 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 YY1AP1Q9H869 796 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 C17orf75Q9HAS0 396 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 C1orf112Q9NSG2 853 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 DNAJC17Q9NVM6 304 aaKnown RBP15.52■□□□□ 0.08
MSH5-201ENST00000375703 ANAPC5Q9UJX4 755 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 PCDHB2Q9Y5E7 798 aa15.52■□□□□ 0.08
MSH5-201ENST00000375703 ZC3H11AO75152 810 aaKnown RBP eCLIP15.52■□□□□ 0.07
MSH5-201ENST00000375703 ATP5DP30049 168 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 C2CD6Q53TS8 623 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 TRPM8Q7Z2W7 1104 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 FAM84AQ96KN4 292 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 SCLT1Q96NL6 688 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 HERPUD2Q9BSE4 406 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 KCNK9Q9NPC2 374 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 GABBR1Q9UBS5 961 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 PGAP2Q9UHJ9 254 aa15.52■□□□□ 0.07
MSH5-201ENST00000375703 SCAF8Q9UPN6 1271 aaKnown RBP15.52■□□□□ 0.07
MSH5-201ENST00000375703 MYBL1P10243 752 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 CREB1P16220 341 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 GARTP22102 1010 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 CAV1Q03135 178 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 BRDTQ58F21 947 aaPredicted RBP15.51■□□□□ 0.07
MSH5-201ENST00000375703 MYPNQ86TC9 1320 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 ZNF677Q86XU0 584 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 ZNF516Q92618 1163 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 TRIM11Q96F44 468 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 HEMGNQ9BXL5 484 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 TMEM120BA0PK00 339 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 ATF2P15336 505 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 NSFP46459 744 aaKnown RBP15.51■□□□□ 0.07
MSH5-201ENST00000375703 BPIFB4P59827 614 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 WDR44Q5JSH3 913 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 LLGL2Q6P1M3 1020 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 RDM1Q8NG50 284 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 DDX27Q96GQ7 796 aaKnown RBP15.51■□□□□ 0.07
MSH5-201ENST00000375703 TRAIPQ9BWF2 469 aa15.51■□□□□ 0.07
MSH5-201ENST00000375703 ZNF277Q9NRM2 450 aaPredicted RBP15.51■□□□□ 0.07
MSH5-201ENST00000375703 BRWD3Q6RI45 1802 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 THAP12O43422 761 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 SNX3O60493 162 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 GSTA1P08263 222 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 VPS41P49754 854 aa15.5■□□□□ 0.07
MSH5-201ENST00000375703 LMBRD2Q68DH5 695 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms