RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Prdm12A2AJ77 365 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gcnt4E9Q649 455 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Stmn4P63042 189 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 RalaP63321 206 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Wdr18Q4VBE8 431 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Dsg1aQ61495 1057 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Myo6Q64331 1265 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Cep104Q80V31 926 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ankfy1Q810B6 1169 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 DnerQ8JZM4 737 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Psmd6Q99JI4 389 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Zmynd10Q99ML0 440 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Atp6v1e2Q9D593 226 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Cst12Q9DAN8 128 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Mical3Q8CJ19 1993 aa16.02■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 2210011C24RikA0A087WQ89 206 aa16.02■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Rnaseh1O70338 285 aa16.02■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Casp14O89094 257 aa16.02■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Trim72Q1XH17 477 aa16.02■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Pkn3Q8K045 878 aa16.02■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Emc2Q9CRD2 297 aa16.02■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Plcg1Q62077 1302 aa16.02■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Phka1P18826 1241 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Mybl1P51960 751 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Adcy8P97490 1249 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Abi3bpQ59IW6 1179 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Creb3l2Q8BH52 521 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Znf771Q8BJ90 317 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Senp7Q8BUH8 1037 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 CgasQ8C6L5 507 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Lrrc14Q8VC16 493 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Spns2Q91VM4 549 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Gps2Q921N8 327 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Arhgef10lA2AWP8 1280 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Gm5926E9PWJ8 236 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Krt8P11679 490 aaKnown RBP16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Atf2P16951 487 aaKnown RBP16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Vamp7P70280 220 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Creb1Q01147 341 aaKnown RBP16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Taok1Q5F2E8 1001 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Zcwpw1Q6IR42 630 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Slc4a7Q8BTY2 1034 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Ccdc137Q8R0K4 290 aaKnown RBP16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Cgref1Q8R1U2 281 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 IkbipQ9DBZ1 373 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Tmod2Q9JKK7 351 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Snx1Q9WV80 522 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Myo5aQ99104 1853 aaKnown RBP16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Gm5936A2BG95 728 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Gm5640A3KG49 728 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Apba1B2RUJ5 842 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Rfx8D3YU81 596 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Clca3bE9PUL3 1044 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Tgfbrap1Q3UR70 860 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Npdc1Q64322 332 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Inpp4bQ6P1Y8 924 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Wdr83Q9DAJ4 315 aaKnown RBP16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Gtf2h1Q9DBA9 547 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Tmem174Q9DCX7 243 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 MycbpQ9EQS3 103 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Rfwd2Q9R1A8 733 aaKnown RBP16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Abcb11Q9QY30 1321 aa16.01■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Megf6Q80V70 1572 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 EloblA6PWE0 161 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Apol7bB1AQP7 369 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Kcnk16G5E845 292 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 NfiaQ02780 532 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 4930502E18RikQ14BQ3 236 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 TraddQ3U0V2 310 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Apol7eQ3UZ24 369 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Klra7Q60654 280 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Garem2Q6PAJ3 880 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Azin2Q8BVM4 459 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Cfap36Q8C6E0 343 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Btbd9Q8C726 612 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Olfr1502Q8VG66 316 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Rnf135Q9CWS1 417 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Lactbl1S4R213 581 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Gm13084A2A8N0 494 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Pla2g6P97819 807 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Tcaf1Q8BNE1 924 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Ints9Q8K114 658 aaKnown RBP16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Hars2Q99KK9 505 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Q9D2Q3 444 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Znf654Q9DAU9 571 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 IydQ9DCX8 285 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Nudt5Q9JKX6 218 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Pdzd4Q9QY39 772 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 CtsfQ9R013 462 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Arih1Q9Z1K5 555 aa16■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Aoc3O70423 765 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Apba3O88888 571 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Adamts10P58459 1104 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Rad54lP70270 747 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Tbx3P70324 741 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Taf1bP97358 586 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Apba2P98084 750 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Srebf2Q3U1N2 1130 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Abl2Q4JIM5 1182 aa15.99■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Stip1Q60864 543 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms