Protein–RNA interactions for Protein: E9Q649

Gcnt4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcnt4E9Q649 Gm25239-201ENSMUST00000174915 86 ntBASIC43,55■■■■■ 4,56
Gcnt4E9Q649 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40,24■■■■■ 4,03
Gcnt4E9Q649 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39,67■■■■□ 3,94
Gcnt4E9Q649 Gm15042-201ENSMUST00000120212 883 ntBASIC38,06■■■■□ 3,68
Gcnt4E9Q649 Gm24109-201ENSMUST00000175489 103 ntBASIC37,77■■■■□ 3,64
Gcnt4E9Q649 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37,42■■■■□ 3,58
Gcnt4E9Q649 Gm15045-201ENSMUST00000117359 883 ntBASIC37,28■■■■□ 3,56
Gcnt4E9Q649 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36,87■■■■□ 3,49
Gcnt4E9Q649 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36,79■■■■□ 3,48
Gcnt4E9Q649 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36,78■■■■□ 3,48
Gcnt4E9Q649 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36,45■■■■□ 3,43
Gcnt4E9Q649 Gm23366-201ENSMUST00000175022 89 ntBASIC36,35■■■■□ 3,41
Gcnt4E9Q649 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36,24■■■■□ 3,39
Gcnt4E9Q649 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36,18■■■■□ 3,38
Gcnt4E9Q649 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35,55■■■■□ 3,28
Gcnt4E9Q649 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35,42■■■■□ 3,26
Gcnt4E9Q649 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35,26■■■■□ 3,23
Gcnt4E9Q649 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35,16■■■■□ 3,22
Gcnt4E9Q649 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35,15■■■■□ 3,22
Gcnt4E9Q649 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35,15■■■■□ 3,22
Gcnt4E9Q649 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35,01■■■■□ 3,2
Gcnt4E9Q649 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34,95■■■■□ 3,19
Gcnt4E9Q649 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34,75■■■■□ 3,15
Gcnt4E9Q649 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34,75■■■■□ 3,15
Gcnt4E9Q649 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,74■■■■□ 3,15
Gcnt4E9Q649 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34,69■■■■□ 3,14
Gcnt4E9Q649 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34,68■■■■□ 3,14
Gcnt4E9Q649 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34,63■■■■□ 3,13
Gcnt4E9Q649 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34,57■■■■□ 3,12
Gcnt4E9Q649 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34,55■■■■□ 3,12
Gcnt4E9Q649 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34,52■■■■□ 3,12
Gcnt4E9Q649 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Gcnt4E9Q649 Psd-208ENSMUST00000224556 2034 ntBASIC34,44■■■■□ 3,1
Gcnt4E9Q649 Gm25238-201ENSMUST00000174914 89 ntBASIC34,39■■■■□ 3,1
Gcnt4E9Q649 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34,31■■■■□ 3,08
Gcnt4E9Q649 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34,24■■■■□ 3,07
Gcnt4E9Q649 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34,18■■■■□ 3,06
Gcnt4E9Q649 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33,89■■■■□ 3,02
Gcnt4E9Q649 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33,72■■■□□ 2,99
Gcnt4E9Q649 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33,6■■■□□ 2,97
Gcnt4E9Q649 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33,57■■■□□ 2,96
Gcnt4E9Q649 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33,54■■■□□ 2,96
Gcnt4E9Q649 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33,54■■■□□ 2,96
Gcnt4E9Q649 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33,46■■■□□ 2,95
Gcnt4E9Q649 Gm27325-201ENSMUST00000175467 74 ntBASIC33,4■■■□□ 2,94
Gcnt4E9Q649 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33,4■■■□□ 2,94
Gcnt4E9Q649 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33,37■■■□□ 2,93
Gcnt4E9Q649 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33,33■■■□□ 2,93
Gcnt4E9Q649 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33,28■■■□□ 2,92
Gcnt4E9Q649 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33,26■■■□□ 2,91
Gcnt4E9Q649 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33,16■■■□□ 2,9
Gcnt4E9Q649 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33,11■■■□□ 2,89
Gcnt4E9Q649 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33,09■■■□□ 2,89
Gcnt4E9Q649 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33,01■■■□□ 2,88
Gcnt4E9Q649 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32,89■■■□□ 2,86
Gcnt4E9Q649 Gm25262-201ENSMUST00000174934 133 ntBASIC32,88■■■□□ 2,85
Gcnt4E9Q649 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32,87■■■□□ 2,85
Gcnt4E9Q649 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32,85■■■□□ 2,85
Gcnt4E9Q649 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32,77■■■□□ 2,84
Gcnt4E9Q649 Rab21-202ENSMUST00000218831 843 ntBASIC32,75■■■□□ 2,83
Gcnt4E9Q649 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32,66■■■□□ 2,82
Gcnt4E9Q649 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32,64■■■□□ 2,82
Gcnt4E9Q649 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32,63■■■□□ 2,81
Gcnt4E9Q649 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32,62■■■□□ 2,81
Gcnt4E9Q649 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32,59■■■□□ 2,81
Gcnt4E9Q649 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32,57■■■□□ 2,8
Gcnt4E9Q649 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32,45■■■□□ 2,79
Gcnt4E9Q649 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32,44■■■□□ 2,78
Gcnt4E9Q649 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32,44■■■□□ 2,78
Gcnt4E9Q649 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32,42■■■□□ 2,78
Gcnt4E9Q649 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32,39■■■□□ 2,78
Gcnt4E9Q649 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32,39■■■□□ 2,78
Gcnt4E9Q649 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32,39■■■□□ 2,78
Gcnt4E9Q649 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Gcnt4E9Q649 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32,35■■■□□ 2,77
Gcnt4E9Q649 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32,33■■■□□ 2,77
Gcnt4E9Q649 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32,3■■■□□ 2,76
Gcnt4E9Q649 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32,29■■■□□ 2,76
Gcnt4E9Q649 Gm10524-201ENSMUST00000181931 1893 ntBASIC32,28■■■□□ 2,76
Gcnt4E9Q649 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Gcnt4E9Q649 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Gcnt4E9Q649 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32,23■■■□□ 2,75
Gcnt4E9Q649 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32,21■■■□□ 2,75
Gcnt4E9Q649 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,19■■■□□ 2,74
Gcnt4E9Q649 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32,17■■■□□ 2,74
Gcnt4E9Q649 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32,13■■■□□ 2,73
Gcnt4E9Q649 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,09■■■□□ 2,73
Gcnt4E9Q649 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32,06■■■□□ 2,72
Gcnt4E9Q649 Gm26115-201ENSMUST00000175605 87 ntBASIC32,03■■■□□ 2,72
Gcnt4E9Q649 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2,71
Gcnt4E9Q649 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Gcnt4E9Q649 Gm42596-201ENSMUST00000196305 1958 ntBASIC31,99■■■□□ 2,71
Gcnt4E9Q649 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31,98■■■□□ 2,71
Gcnt4E9Q649 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Gcnt4E9Q649 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31,93■■■□□ 2,7
Gcnt4E9Q649 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31,91■■■□□ 2,7
Gcnt4E9Q649 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31,9■■■□□ 2,7
Gcnt4E9Q649 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31,89■■■□□ 2,7
Gcnt4E9Q649 Gm8109-201ENSMUST00000194076 746 ntBASIC31,88■■■□□ 2,69
Gcnt4E9Q649 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,88■■■□□ 2,69
Retrieved 100 of 76,532 protein–RNA pairs in 50,1 ms