Protein–RNA interactions for Protein: Q3U1N2

Srebf2, Sterol regulatory element-binding protein 2, mousemouse

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf2Q3U1N2 Gm25239-201ENSMUST00000174915 86 ntBASIC43,18■■■■■ 4,5
Srebf2Q3U1N2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40,08■■■■■ 4,01
Srebf2Q3U1N2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39,54■■■■□ 3,92
Srebf2Q3U1N2 Gm24109-201ENSMUST00000175489 103 ntBASIC37,56■■■■□ 3,6
Srebf2Q3U1N2 Gm15042-201ENSMUST00000120212 883 ntBASIC37,43■■■■□ 3,58
Srebf2Q3U1N2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36,66■■■■□ 3,46
Srebf2Q3U1N2 Gm15045-201ENSMUST00000117359 883 ntBASIC36,5■■■■□ 3,43
Srebf2Q3U1N2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36,5■■■■□ 3,43
Srebf2Q3U1N2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36,49■■■■□ 3,43
Srebf2Q3U1N2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36,49■■■■□ 3,43
Srebf2Q3U1N2 Gm23366-201ENSMUST00000175022 89 ntBASIC36,08■■■■□ 3,37
Srebf2Q3U1N2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35,87■■■■□ 3,33
Srebf2Q3U1N2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35,79■■■■□ 3,32
Srebf2Q3U1N2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35,43■■■■□ 3,26
Srebf2Q3U1N2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35,15■■■■□ 3,22
Srebf2Q3U1N2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Srebf2Q3U1N2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,85■■■■□ 3,17
Srebf2Q3U1N2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34,79■■■■□ 3,16
Srebf2Q3U1N2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34,74■■■■□ 3,15
Srebf2Q3U1N2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34,67■■■■□ 3,14
Srebf2Q3U1N2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34,61■■■■□ 3,13
Srebf2Q3U1N2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34,33■■■■□ 3,09
Srebf2Q3U1N2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34,32■■■■□ 3,08
Srebf2Q3U1N2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34,29■■■■□ 3,08
Srebf2Q3U1N2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34,29■■■■□ 3,08
Srebf2Q3U1N2 Gm25238-201ENSMUST00000174914 89 ntBASIC34,17■■■■□ 3,06
Srebf2Q3U1N2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34,05■■■■□ 3,04
Srebf2Q3U1N2 Psd-208ENSMUST00000224556 2034 ntBASIC33,95■■■■□ 3,03
Srebf2Q3U1N2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,84■■■■□ 3,01
Srebf2Q3U1N2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,79■■■■□ 3
Srebf2Q3U1N2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33,67■■■□□ 2,98
Srebf2Q3U1N2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33,59■■■□□ 2,97
Srebf2Q3U1N2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33,58■■■□□ 2,97
Srebf2Q3U1N2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,57■■■□□ 2,96
Srebf2Q3U1N2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33,4■■■□□ 2,94
Srebf2Q3U1N2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33,39■■■□□ 2,94
Srebf2Q3U1N2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33,33■■■□□ 2,93
Srebf2Q3U1N2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33,28■■■□□ 2,92
Srebf2Q3U1N2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33,18■■■□□ 2,9
Srebf2Q3U1N2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33,17■■■□□ 2,9
Srebf2Q3U1N2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33,16■■■□□ 2,9
Srebf2Q3U1N2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33,06■■■□□ 2,88
Srebf2Q3U1N2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33,05■■■□□ 2,88
Srebf2Q3U1N2 Gm25262-201ENSMUST00000174934 133 ntBASIC32,98■■■□□ 2,87
Srebf2Q3U1N2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32,82■■■□□ 2,84
Srebf2Q3U1N2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,84
Srebf2Q3U1N2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32,76■■■□□ 2,84
Srebf2Q3U1N2 Gm27325-201ENSMUST00000175467 74 ntBASIC32,75■■■□□ 2,83
Srebf2Q3U1N2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32,6■■■□□ 2,81
Srebf2Q3U1N2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,55■■■□□ 2,8
Srebf2Q3U1N2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32,54■■■□□ 2,8
Srebf2Q3U1N2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Srebf2Q3U1N2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32,4■■■□□ 2,78
Srebf2Q3U1N2 Rab21-202ENSMUST00000218831 843 ntBASIC32,4■■■□□ 2,78
Srebf2Q3U1N2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32,39■■■□□ 2,78
Srebf2Q3U1N2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32,39■■■□□ 2,78
Srebf2Q3U1N2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32,35■■■□□ 2,77
Srebf2Q3U1N2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32,33■■■□□ 2,77
Srebf2Q3U1N2 Gm26115-201ENSMUST00000175605 87 ntBASIC32,3■■■□□ 2,76
Srebf2Q3U1N2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32,24■■■□□ 2,75
Srebf2Q3U1N2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32,22■■■□□ 2,75
Srebf2Q3U1N2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32,18■■■□□ 2,74
Srebf2Q3U1N2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32,09■■■□□ 2,73
Srebf2Q3U1N2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32,06■■■□□ 2,72
Srebf2Q3U1N2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32,05■■■□□ 2,72
Srebf2Q3U1N2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32,03■■■□□ 2,72
Srebf2Q3U1N2 Gm8109-201ENSMUST00000194076 746 ntBASIC32,03■■■□□ 2,72
Srebf2Q3U1N2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32,02■■■□□ 2,72
Srebf2Q3U1N2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32,02■■■□□ 2,72
Srebf2Q3U1N2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Srebf2Q3U1N2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31,99■■■□□ 2,71
Srebf2Q3U1N2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,94■■■□□ 2,7
Srebf2Q3U1N2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31,9■■■□□ 2,7
Srebf2Q3U1N2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31,85■■■□□ 2,69
Srebf2Q3U1N2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31,84■■■□□ 2,69
Srebf2Q3U1N2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31,8■■■□□ 2,68
Srebf2Q3U1N2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,72■■■□□ 2,67
Srebf2Q3U1N2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,71■■■□□ 2,67
Srebf2Q3U1N2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Srebf2Q3U1N2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31,68■■■□□ 2,66
Srebf2Q3U1N2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,66
Srebf2Q3U1N2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31,64■■■□□ 2,66
Srebf2Q3U1N2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31,55■■■□□ 2,64
Srebf2Q3U1N2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31,52■■■□□ 2,64
Srebf2Q3U1N2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31,51■■■□□ 2,63
Srebf2Q3U1N2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31,51■■■□□ 2,63
Srebf2Q3U1N2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31,46■■■□□ 2,63
Srebf2Q3U1N2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31,46■■■□□ 2,63
Srebf2Q3U1N2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
Srebf2Q3U1N2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31,43■■■□□ 2,62
Srebf2Q3U1N2 Gm10524-201ENSMUST00000181931 1893 ntBASIC31,4■■■□□ 2,62
Srebf2Q3U1N2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Srebf2Q3U1N2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31,29■■■□□ 2,6
Srebf2Q3U1N2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31,29■■■□□ 2,6
Srebf2Q3U1N2 Gm17082-201ENSMUST00000166043 1091 ntBASIC31,28■■■□□ 2,6
Srebf2Q3U1N2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Srebf2Q3U1N2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31,21■■■□□ 2,59
Srebf2Q3U1N2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31,19■■■□□ 2,58
Srebf2Q3U1N2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31,16■■■□□ 2,58
Srebf2Q3U1N2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Retrieved 100 of 76,532 protein–RNA pairs in 18,8 ms