Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Gm25239-201ENSMUST00000174915 86 ntBASIC42,33■■■■■ 4,37
Apba3O88888 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39,11■■■■□ 3,85
Apba3O88888 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38,52■■■■□ 3,76
Apba3O88888 Gm15042-201ENSMUST00000120212 883 ntBASIC37,04■■■■□ 3,52
Apba3O88888 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36,93■■■■□ 3,5
Apba3O88888 Gm24109-201ENSMUST00000175489 103 ntBASIC36,65■■■■□ 3,46
Apba3O88888 Gm15045-201ENSMUST00000117359 883 ntBASIC36,27■■■■□ 3,4
Apba3O88888 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36,19■■■■□ 3,38
Apba3O88888 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Apba3O88888 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35,7■■■■□ 3,31
Apba3O88888 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35,69■■■■□ 3,3
Apba3O88888 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35,39■■■■□ 3,26
Apba3O88888 Gm23366-201ENSMUST00000175022 89 ntBASIC35,31■■■■□ 3,24
Apba3O88888 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35,14■■■■□ 3,22
Apba3O88888 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34,83■■■■□ 3,17
Apba3O88888 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34,56■■■■□ 3,12
Apba3O88888 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34,53■■■■□ 3,12
Apba3O88888 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34,36■■■■□ 3,09
Apba3O88888 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34,25■■■■□ 3,07
Apba3O88888 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34,16■■■■□ 3,06
Apba3O88888 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34,16■■■■□ 3,06
Apba3O88888 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34,04■■■■□ 3,04
Apba3O88888 Psd-208ENSMUST00000224556 2034 ntBASIC34,03■■■■□ 3,04
Apba3O88888 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33,99■■■■□ 3,03
Apba3O88888 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,99■■■■□ 3,03
Apba3O88888 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33,99■■■■□ 3,03
Apba3O88888 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,98■■■■□ 3,03
Apba3O88888 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33,9■■■■□ 3,02
Apba3O88888 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33,74■■■□□ 2,99
Apba3O88888 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33,73■■■□□ 2,99
Apba3O88888 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33,59■■■□□ 2,97
Apba3O88888 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33,57■■■□□ 2,96
Apba3O88888 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33,53■■■□□ 2,96
Apba3O88888 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33,46■■■□□ 2,95
Apba3O88888 Gm25238-201ENSMUST00000174914 89 ntBASIC33,41■■■□□ 2,94
Apba3O88888 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33,28■■■□□ 2,92
Apba3O88888 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33,16■■■□□ 2,9
Apba3O88888 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33,15■■■□□ 2,9
Apba3O88888 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33,01■■■□□ 2,88
Apba3O88888 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2,87
Apba3O88888 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32,98■■■□□ 2,87
Apba3O88888 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32,72■■■□□ 2,83
Apba3O88888 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,71■■■□□ 2,83
Apba3O88888 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32,65■■■□□ 2,82
Apba3O88888 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32,59■■■□□ 2,81
Apba3O88888 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32,58■■■□□ 2,81
Apba3O88888 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32,53■■■□□ 2,8
Apba3O88888 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32,49■■■□□ 2,79
Apba3O88888 Gm27325-201ENSMUST00000175467 74 ntBASIC32,48■■■□□ 2,79
Apba3O88888 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32,43■■■□□ 2,78
Apba3O88888 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32,39■■■□□ 2,78
Apba3O88888 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32,37■■■□□ 2,77
Apba3O88888 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32,27■■■□□ 2,76
Apba3O88888 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32,18■■■□□ 2,74
Apba3O88888 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32,17■■■□□ 2,74
Apba3O88888 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32,16■■■□□ 2,74
Apba3O88888 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32,11■■■□□ 2,73
Apba3O88888 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32,1■■■□□ 2,73
Apba3O88888 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32,05■■■□□ 2,72
Apba3O88888 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Apba3O88888 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31,89■■■□□ 2,7
Apba3O88888 Gm25262-201ENSMUST00000174934 133 ntBASIC31,88■■■□□ 2,69
Apba3O88888 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Apba3O88888 Rab21-202ENSMUST00000218831 843 ntBASIC31,8■■■□□ 2,68
Apba3O88888 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31,79■■■□□ 2,68
Apba3O88888 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,78■■■□□ 2,68
Apba3O88888 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31,77■■■□□ 2,68
Apba3O88888 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31,72■■■□□ 2,67
Apba3O88888 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Apba3O88888 Gm10524-201ENSMUST00000181931 1893 ntBASIC31,72■■■□□ 2,67
Apba3O88888 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31,7■■■□□ 2,67
Apba3O88888 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Apba3O88888 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31,67■■■□□ 2,66
Apba3O88888 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31,65■■■□□ 2,66
Apba3O88888 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,65
Apba3O88888 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Apba3O88888 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31,58■■■□□ 2,65
Apba3O88888 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31,55■■■□□ 2,64
Apba3O88888 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31,54■■■□□ 2,64
Apba3O88888 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Apba3O88888 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31,52■■■□□ 2,64
Apba3O88888 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31,49■■■□□ 2,63
Apba3O88888 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31,41■■■□□ 2,62
Apba3O88888 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31,4■■■□□ 2,62
Apba3O88888 Gm42596-201ENSMUST00000196305 1958 ntBASIC31,39■■■□□ 2,62
Apba3O88888 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,35■■■□□ 2,61
Apba3O88888 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Apba3O88888 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31,32■■■□□ 2,6
Apba3O88888 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,29■■■□□ 2,6
Apba3O88888 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,25■■■□□ 2,59
Apba3O88888 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Apba3O88888 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31,23■■■□□ 2,59
Apba3O88888 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31,21■■■□□ 2,59
Apba3O88888 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31,19■■■□□ 2,58
Apba3O88888 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Apba3O88888 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31,07■■■□□ 2,56
Apba3O88888 Gm26115-201ENSMUST00000175605 87 ntBASIC31,04■■■□□ 2,56
Apba3O88888 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Apba3O88888 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30,96■■■□□ 2,55
Apba3O88888 Gm8109-201ENSMUST00000194076 746 ntBASIC30,96■■■□□ 2,55
Retrieved 100 of 76,532 protein–RNA pairs in 8,9 ms