RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C YOR283WQ12040 230 aaKnown RBP5.04□□□□□ -1.6
UBC11YOR339C TGS1Q12052 315 aa5.04□□□□□ -1.6
UBC11YOR339C NCE102Q12207 173 aaRIP-Chip data5.04□□□□□ -1.6not detected
UBC11YOR339C SPS100P13130 326 aa5.03□□□□□ -1.6
UBC11YOR339C ARO3P14843 370 aaKnown RBP5.03□□□□□ -1.6
UBC11YOR339C HXT2P23585 541 aa5.03□□□□□ -1.6
UBC11YOR339C PET18P25362 215 aa5.03□□□□□ -1.6
UBC11YOR339C DEG1P31115 442 aaKnown RBP5.03□□□□□ -1.6
UBC11YOR339C AFG1P32317 509 aa5.03□□□□□ -1.6
UBC11YOR339C NPL6P32832 435 aa5.03□□□□□ -1.6
UBC11YOR339C CLB6P32943 380 aa5.03□□□□□ -1.6
UBC11YOR339C PPZ2P33329 710 aa5.03□□□□□ -1.6
UBC11YOR339C TCM62P38228 572 aaKnown RBP5.03□□□□□ -1.6
UBC11YOR339C YBR220CP38318 560 aa5.03□□□□□ -1.6
UBC11YOR339C YGP1P38616 354 aaKnown RBP5.03□□□□□ -1.6
UBC11YOR339C HPA3P39979 161 aa5.03□□□□□ -1.6
UBC11YOR339C AVT4P50944 713 aa5.03□□□□□ -1.6
UBC11YOR339C YIP5P53108 310 aa5.03□□□□□ -1.6
UBC11YOR339C FMP48P53233 369 aa5.03□□□□□ -1.6
UBC11YOR339C YLR283WQ05867 314 aa5.03□□□□□ -1.6
UBC11YOR339C RSC58Q07979 502 aa5.03□□□□□ -1.6
UBC11YOR339C RRS1Q08746 203 aaKnown RBP5.03□□□□□ -1.6
UBC11YOR339C INP53Q12271 1107 aa5.03□□□□□ -1.6
UBC11YOR339C YLR358CO13565 187 aa5.02□□□□□ -1.61
UBC11YOR339C MSI1P13712 422 aa5.02□□□□□ -1.61
UBC11YOR339C PUP1P25043 261 aa5.02□□□□□ -1.61
UBC11YOR339C ARO4P32449 370 aaKnown RBP5.02□□□□□ -1.61
UBC11YOR339C GLC7P32598 312 aaKnown RBP5.02□□□□□ -1.61
UBC11YOR339C MCH2P36032 473 aa5.02□□□□□ -1.61
UBC11YOR339C UMP1P38293 148 aa5.02□□□□□ -1.61
UBC11YOR339C YND1P40009 630 aa5.02□□□□□ -1.61
UBC11YOR339C YMR144WP40214 342 aaKnown RBP5.02□□□□□ -1.61
UBC11YOR339C YIL060WP40519 144 aa5.02□□□□□ -1.61
UBC11YOR339C YIL029CP40538 142 aa5.02□□□□□ -1.61
UBC11YOR339C OST1P41543 476 aaKnown RBP5.02□□□□□ -1.61
UBC11YOR339C GPI14P47088 403 aaKnown RBP5.02□□□□□ -1.61
UBC11YOR339C UBC13P52490 153 aa5.02□□□□□ -1.61
UBC11YOR339C MTL1P53214 551 aa5.02□□□□□ -1.61
UBC11YOR339C YGR042WP53227 271 aa5.02□□□□□ -1.61
UBC11YOR339C VHT1P53241 593 aa5.02□□□□□ -1.61
UBC11YOR339C CTF19Q02732 369 aa5.02□□□□□ -1.61
UBC11YOR339C YMR130WQ04223 302 aa5.02□□□□□ -1.61
UBC11YOR339C YPL199CQ08954 240 aa5.02□□□□□ -1.61
UBC11YOR339C SRL2Q12020 392 aa5.02□□□□□ -1.61
UBC11YOR339C USB1Q12208 290 aaKnown RBP5.02□□□□□ -1.61
UBC11YOR339C CYC1P00044 109 aaPredicted RBP5.01□□□□□ -1.61
UBC11YOR339C CAP2P13517 287 aa5.01□□□□□ -1.61
UBC11YOR339C ZUO1P32527 433 aaKnown RBP5.01□□□□□ -1.61
UBC11YOR339C REC114P32841 428 aa5.01□□□□□ -1.61
UBC11YOR339C MTR2P34232 184 aaKnown RBP5.01□□□□□ -1.61
UBC11YOR339C ARO9P38840 513 aaPredicted RBP5.01□□□□□ -1.61
UBC11YOR339C SMB1P40018 196 aaKnown RBP5.01□□□□□ -1.61
UBC11YOR339C SYS1P41544 203 aa5.01□□□□□ -1.61
UBC11YOR339C CAT5P41735 233 aa5.01□□□□□ -1.61
UBC11YOR339C BXI1P48558 297 aa5.01□□□□□ -1.61
UBC11YOR339C SKO1Q02100 647 aa5.01□□□□□ -1.61
UBC11YOR339C YKR005CQ02203 525 aa5.01□□□□□ -1.61
UBC11YOR339C PEX10Q05568 337 aa5.01□□□□□ -1.61
UBC11YOR339C KEI1Q06346 221 aa5.01□□□□□ -1.61
UBC11YOR339C RFU1Q08003 200 aa5.01□□□□□ -1.61
UBC11YOR339C ODC2Q99297 307 aa5.01□□□□□ -1.61
UBC11YOR339C MEC1P38111 2368 aa5□□□□□ -1.61
UBC11YOR339C MET3P08536 511 aa5□□□□□ -1.61
UBC11YOR339C SAG1P20840 650 aa5□□□□□ -1.61
UBC11YOR339C VAM7P32912 316 aa5□□□□□ -1.61
UBC11YOR339C ARC40P38328 384 aaKnown RBP5□□□□□ -1.61
UBC11YOR339C NSA1P53136 463 aaPredicted RBP5□□□□□ -1.61
UBC11YOR339C TYW3P53177 273 aa5□□□□□ -1.61
UBC11YOR339C LSM7P53905 115 aaKnown RBP5□□□□□ -1.61
UBC11YOR339C CRZ1P53968 678 aa5□□□□□ -1.61
UBC11YOR339C DLT1Q04216 342 aa5□□□□□ -1.61
UBC11YOR339C SPR28Q04921 423 aa5□□□□□ -1.61
UBC11YOR339C YPR196WQ06595 470 aa5□□□□□ -1.61
UBC11YOR339C MRX9Q07349 420 aaKnown RBP5□□□□□ -1.61
UBC11YOR339C GAT3Q07928 141 aa5□□□□□ -1.61
UBC11YOR339C CDC28P00546 298 aaKnown RBP4.99□□□□□ -1.61
UBC11YOR339C GPM1P00950 247 aaKnown RBP4.99□□□□□ -1.61
UBC11YOR339C VMA5P31412 392 aaKnown RBP4.99□□□□□ -1.61
UBC11YOR339C HYM1P32464 399 aa4.99□□□□□ -1.61
UBC11YOR339C NAB2P32505 525 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
UBC11YOR339C YBL010CP32788 280 aa4.99□□□□□ -1.61
UBC11YOR339C YKL063CP35725 167 aa4.99□□□□□ -1.61
UBC11YOR339C FAT1P38225 669 aa4.99□□□□□ -1.61
UBC11YOR339C PRS3P38689 320 aaKnown RBP4.99□□□□□ -1.61
UBC11YOR339C YHR122WP38829 231 aa4.99□□□□□ -1.61
UBC11YOR339C YER079WP40052 210 aaKnown RBP4.99□□□□□ -1.61
UBC11YOR339C OTU1P43558 301 aa4.99□□□□□ -1.61
UBC11YOR339C TPN1P53099 579 aa4.99□□□□□ -1.61
UBC11YOR339C DMA2P53924 522 aa4.99□□□□□ -1.61
UBC11YOR339C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
UBC11YOR339C YMR279CQ03263 540 aa4.99□□□□□ -1.61
UBC11YOR339C YPR098CQ06089 161 aa4.99□□□□□ -1.61
UBC11YOR339C YTH1Q06102 208 aaPredicted RBP4.99□□□□□ -1.61
UBC11YOR339C PHO92Q06390 306 aa4.99□□□□□ -1.61
UBC11YOR339C ERP4Q12450 207 aa4.99□□□□□ -1.61
UBC11YOR339C HUT1Q12520 339 aa4.99□□□□□ -1.61
UBC11YOR339C HTZ1Q12692 134 aaKnown RBP4.99□□□□□ -1.61
UBC11YOR339C REP2P03872 296 aa4.98□□□□□ -1.61
UBC11YOR339C RPL6BP05739 176 aaKnown RBP4.98□□□□□ -1.61
UBC11YOR339C CHO1P08456 276 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms