RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W YDR018CQ12185 396 aa1.69□□□□□ -2.14
HER1YOR227W FOL3Q12676 427 aaPredicted RBP1.69□□□□□ -2.14
HER1YOR227W GCY1P14065 312 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
HER1YOR227W SLY1P22213 666 aa1.68□□□□□ -2.14
HER1YOR227W MRPL8P22353 238 aa1.68□□□□□ -2.14
HER1YOR227W YCR100CP25606 316 aa1.68□□□□□ -2.14
HER1YOR227W SEC1P30619 724 aaKnown RBP1.68□□□□□ -2.14
HER1YOR227W MDH3P32419 343 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
HER1YOR227W NRD1P53617 575 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
HER1YOR227W YLR152CP54072 576 aa1.68□□□□□ -2.14
HER1YOR227W RSM10Q03201 203 aa1.68□□□□□ -2.14
HER1YOR227W TRM82Q03774 444 aa1.68□□□□□ -2.14
HER1YOR227W MHR1Q06630 226 aa1.68□□□□□ -2.14
HER1YOR227W SSK1Q07084 712 aa1.68□□□□□ -2.14
HER1YOR227W POM33Q12164 279 aa1.68□□□□□ -2.14
HER1YOR227W HRT3Q12347 344 aa1.68□□□□□ -2.14
HER1YOR227W PET20Q99373 253 aa1.68□□□□□ -2.14
HER1YOR227W PHO2P07269 559 aa1.68□□□□□ -2.14
HER1YOR227W SPS100P13130 326 aa1.68□□□□□ -2.14
HER1YOR227W IDH1P28834 360 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
HER1YOR227W PDC2P32896 925 aa1.68□□□□□ -2.14
HER1YOR227W PHD1P36093 366 aa1.68□□□□□ -2.14
HER1YOR227W NVJ1P38881 321 aa1.68□□□□□ -2.14
HER1YOR227W FMP32P43557 207 aa1.68□□□□□ -2.14
HER1YOR227W IRC18P47056 224 aa1.68□□□□□ -2.14
HER1YOR227W YJR111CP47148 283 aaKnown RBP1.68□□□□□ -2.14
HER1YOR227W YPS5P53057 165 aa1.68□□□□□ -2.14
HER1YOR227W YGL034CP53186 121 aa1.68□□□□□ -2.14
HER1YOR227W SDC1Q03323 175 aa1.68□□□□□ -2.14
HER1YOR227W BCH1Q05029 724 aa1.68□□□□□ -2.14
HER1YOR227W YDR278CQ05612 105 aa1.68□□□□□ -2.14
HER1YOR227W RFM1Q12192 310 aa1.68□□□□□ -2.14
HER1YOR227W BCY1P07278 416 aaKnown RBP1.68□□□□□ -2.14
HER1YOR227W YCR025CP25352 136 aa1.68□□□□□ -2.14
HER1YOR227W HRR25P29295 494 aaKnown RBP1.68□□□□□ -2.14
HER1YOR227W ITR2P30606 609 aa1.68□□□□□ -2.14
HER1YOR227W ATS1P31386 333 aa1.68□□□□□ -2.14
HER1YOR227W GPX1P36014 167 aa1.68□□□□□ -2.14
HER1YOR227W RIM2P38127 377 aa1.68□□□□□ -2.14
HER1YOR227W DER1P38307 211 aa1.68□□□□□ -2.14
HER1YOR227W GEP4P38812 185 aa1.68□□□□□ -2.14
HER1YOR227W GWT1P47026 490 aa1.68□□□□□ -2.14
HER1YOR227W NUP57P48837 541 aa1.68□□□□□ -2.14
HER1YOR227W AVT4P50944 713 aa1.68□□□□□ -2.14
HER1YOR227W YMR027WQ04371 470 aa1.68□□□□□ -2.14
HER1YOR227W SWF1Q04629 336 aa1.68□□□□□ -2.14
HER1YOR227W RSA1Q08932 381 aa1.68□□□□□ -2.14
HER1YOR227W YLR112WQ12130 139 aa1.68□□□□□ -2.14
HER1YOR227W NSL1Q12143 216 aa1.68□□□□□ -2.14
HER1YOR227W TIR4Q12218 487 aaPredicted RBP1.68□□□□□ -2.14
HER1YOR227W TPO4Q12256 659 aa1.68□□□□□ -2.14
HER1YOR227W EMP46Q12396 444 aa1.68□□□□□ -2.14
HER1YOR227W AGC1Q12482 902 aa1.68□□□□□ -2.14
HER1YOR227W MRS3P10566 314 aa1.67□□□□□ -2.14
HER1YOR227W COQ2P32378 372 aa1.67□□□□□ -2.14
HER1YOR227W MNS1P32906 549 aa1.67□□□□□ -2.14
HER1YOR227W POP7P38291 140 aa1.67□□□□□ -2.14
HER1YOR227W GRE3P38715 327 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
HER1YOR227W CHL4P38907 458 aa1.67□□□□□ -2.14
HER1YOR227W VRG4P40107 337 aa1.67□□□□□ -2.14
HER1YOR227W YIL067CP40514 678 aa1.67□□□□□ -2.14
HER1YOR227W AIM23P47015 356 aa1.67□□□□□ -2.14
HER1YOR227W YJR054WP47114 497 aa1.67□□□□□ -2.14
HER1YOR227W VMA10P48836 114 aaKnown RBP1.67□□□□□ -2.14
HER1YOR227W UBC12P52491 188 aa1.67□□□□□ -2.14
HER1YOR227W NUP49Q02199 472 aa1.67□□□□□ -2.14
HER1YOR227W ECM11Q04110 302 aa1.67□□□□□ -2.14
HER1YOR227W FAR10Q06001 478 aa1.67□□□□□ -2.14
HER1YOR227W SEI1Q06058 285 aa1.67□□□□□ -2.14
HER1YOR227W PEX30Q06169 523 aa1.67□□□□□ -2.14
HER1YOR227W YLR446WQ06204 433 aa1.67□□□□□ -2.14
HER1YOR227W MSA1Q08471 629 aa1.67□□□□□ -2.14
HER1YOR227W JLP1Q12358 412 aa1.67□□□□□ -2.14
HER1YOR227W MRP1P10662 321 aaKnown RBP1.67□□□□□ -2.14
HER1YOR227W CUP2P15315 225 aa1.67□□□□□ -2.14
HER1YOR227W NAM9P27929 486 aa1.67□□□□□ -2.14
HER1YOR227W GLC7P32598 312 aaKnown RBP1.67□□□□□ -2.14
HER1YOR227W COX13P32799 129 aa1.67□□□□□ -2.14
HER1YOR227W PEX2P32800 271 aa1.67□□□□□ -2.14
HER1YOR227W TOD6P34219 525 aa1.67□□□□□ -2.14
HER1YOR227W YET1P35723 206 aa1.67□□□□□ -2.14
HER1YOR227W MRPL28P36527 147 aa1.67□□□□□ -2.14
HER1YOR227W AVT5P38176 459 aa1.67□□□□□ -2.14
HER1YOR227W MBA1P38300 278 aa1.67□□□□□ -2.14
HER1YOR227W SDS24P38314 527 aa1.67□□□□□ -2.14
HER1YOR227W BAT1P38891 393 aaKnown RBP1.67□□□□□ -2.14
HER1YOR227W SRP14P38985 146 aa1.67□□□□□ -2.14
HER1YOR227W YIL029CP40538 142 aa1.67□□□□□ -2.14
HER1YOR227W USE1P53146 245 aa1.67□□□□□ -2.14
HER1YOR227W HSK3P69852 69 aa1.67□□□□□ -2.14
HER1YOR227W RHO3Q00245 231 aaKnown RBP1.67□□□□□ -2.14
HER1YOR227W PEX12Q04370 399 aa1.67□□□□□ -2.14
HER1YOR227W ORM2Q06144 216 aa1.67□□□□□ -2.14
HER1YOR227W TPO3Q06451 622 aa1.67□□□□□ -2.14
HER1YOR227W MUM3Q08750 479 aa1.67□□□□□ -2.14
HER1YOR227W YLR053CQ12026 108 aa1.67□□□□□ -2.14
HER1YOR227W PRM4Q12498 284 aa1.67□□□□□ -2.14
HER1YOR227W SEC4P07560 215 aaKnown RBP1.67□□□□□ -2.14
HER1YOR227W COS2P0CX12 379 aa1.67□□□□□ -2.14
HER1YOR227W COS3P0CX13 379 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms