RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W YND1P40009 630 aa5.63□□□□□ -1.51
LSC1YOR142W YJL218WP40892 196 aaKnown RBP5.63□□□□□ -1.51
LSC1YOR142W BUD8P41698 603 aa5.63□□□□□ -1.51
LSC1YOR142W POP6P53218 158 aa5.63□□□□□ -1.51
LSC1YOR142W SLI1P53304 468 aa5.63□□□□□ -1.51
LSC1YOR142W YDR179W-AQ03983 463 aa5.63□□□□□ -1.51
LSC1YOR142W GMC1Q04399 608 aa5.63□□□□□ -1.51
LSC1YOR142W YPR098CQ06089 161 aa5.63□□□□□ -1.51
LSC1YOR142W LUC7Q07508 261 aaPredicted RBP5.63□□□□□ -1.51
LSC1YOR142W RFU1Q08003 200 aa5.63□□□□□ -1.51
LSC1YOR142W TGS1Q12052 315 aa5.63□□□□□ -1.51
LSC1YOR142W USB1Q12208 290 aaKnown RBP5.63□□□□□ -1.51
LSC1YOR142W FRE8Q12209 686 aa5.63□□□□□ -1.51
LSC1YOR142W ORT1Q12375 292 aa5.63□□□□□ -1.51
LSC1YOR142W SPO24Q3E752 67 aa5.63□□□□□ -1.51
LSC1YOR142W YML003WP0CF16 290 aa5.62□□□□□ -1.51
LSC1YOR142W MATALPHA1P0CY06 175 aa5.62□□□□□ -1.51
LSC1YOR142W HMLALPHA1P0CY07 175 aa5.62□□□□□ -1.51
LSC1YOR142W AHC2P25649 128 aa5.62□□□□□ -1.51
LSC1YOR142W PAU2P32612 120 aa5.62□□□□□ -1.51
LSC1YOR142W YOX1P34161 385 aa5.62□□□□□ -1.51
LSC1YOR142W YER079WP40052 210 aaKnown RBP5.62□□□□□ -1.51
LSC1YOR142W RIO2P40160 425 aaKnown RBP5.62□□□□□ -1.51
LSC1YOR142W BNA2P47125 453 aa5.62□□□□□ -1.51
LSC1YOR142W AVT4P50944 713 aa5.62□□□□□ -1.51
LSC1YOR142W IMO32P53219 342 aa5.62□□□□□ -1.51
LSC1YOR142W HUT1Q12520 339 aa5.62□□□□□ -1.51
LSC1YOR142W YCL048W-AQ2V2Q2 79 aa5.62□□□□□ -1.51
LSC1YOR142W REP1P03871 373 aa5.61□□□□□ -1.51
LSC1YOR142W HXT2P23585 541 aa5.61□□□□□ -1.51
LSC1YOR142W RPL24BP24000 155 aaKnown RBP5.61□□□□□ -1.51
LSC1YOR142W MTC7P32633 139 aa5.61□□□□□ -1.51
LSC1YOR142W SFK1P35735 353 aa5.61□□□□□ -1.51
LSC1YOR142W DDI1P40087 428 aa5.61□□□□□ -1.51
LSC1YOR142W DOC1P53068 250 aa5.61□□□□□ -1.51
LSC1YOR142W NSA1P53136 463 aaPredicted RBP5.61□□□□□ -1.51
LSC1YOR142W YKR005CQ02203 525 aa5.61□□□□□ -1.51
LSC1YOR142W YDR248CQ03786 193 aa5.61□□□□□ -1.51
LSC1YOR142W PEX30Q06169 523 aa5.61□□□□□ -1.51
LSC1YOR142W YOR029WQ12243 111 aa5.61□□□□□ -1.51
LSC1YOR142W FUR4P05316 633 aaKnown RBP5.6□□□□□ -1.51
LSC1YOR142W RPS18AP0CX55 146 aaKnown RBP5.6□□□□□ -1.51
LSC1YOR142W RPS18BP0CX56 146 aaPredicted RBP5.6□□□□□ -1.51
LSC1YOR142W CNE1P27825 502 aa5.6□□□□□ -1.51
LSC1YOR142W SNC2P33328 115 aa5.6□□□□□ -1.51
LSC1YOR142W YHL044WP38727 235 aa5.6□□□□□ -1.51
LSC1YOR142W RMD6P39975 231 aa5.6□□□□□ -1.51
LSC1YOR142W GON7P46984 123 aa5.6□□□□□ -1.51
LSC1YOR142W BUD25P85052 153 aa5.6□□□□□ -1.51
LSC1YOR142W SPR28Q04921 423 aa5.6□□□□□ -1.51
LSC1YOR142W YLR358CO13565 187 aa5.59□□□□□ -1.51
LSC1YOR142W QCR7P00128 127 aa5.59□□□□□ -1.51
LSC1YOR142W CDC28P00546 298 aaKnown RBP5.59□□□□□ -1.51
LSC1YOR142W GCN4P03069 281 aa5.59□□□□□ -1.51
LSC1YOR142W REP2P03872 296 aa5.59□□□□□ -1.51
LSC1YOR142W GCD1P09032 578 aaPredicted RBP5.59□□□□□ -1.51
LSC1YOR142W RCN1P36054 211 aa5.59□□□□□ -1.51
LSC1YOR142W SLM1P40485 686 aa5.59□□□□□ -1.51
LSC1YOR142W TAF4P50105 388 aa5.59□□□□□ -1.51
LSC1YOR142W SPO19Q03029 223 aa5.59□□□□□ -1.51
LSC1YOR142W GRX3Q03835 250 aa5.59□□□□□ -1.51
LSC1YOR142W RRP17Q04031 235 aaPredicted RBP5.59□□□□□ -1.51
LSC1YOR142W YLR283WQ05867 314 aa5.59□□□□□ -1.51
LSC1YOR142W ATG17Q06410 417 aa5.59□□□□□ -1.51
LSC1YOR142W MDM36Q06820 579 aa5.59□□□□□ -1.51
LSC1YOR142W CSI2Q08054 341 aa5.59□□□□□ -1.51
LSC1YOR142W MPD1Q12404 318 aaKnown RBP5.59□□□□□ -1.51
LSC1YOR142W HIS3P06633 220 aa5.58□□□□□ -1.52
LSC1YOR142W CDC31P06704 161 aaKnown RBP5.58□□□□□ -1.52
LSC1YOR142W ARO4P32449 370 aaKnown RBP5.58□□□□□ -1.52
LSC1YOR142W VMA11P32842 164 aa5.58□□□□□ -1.52
LSC1YOR142W SHE2P36068 246 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
LSC1YOR142W MRPL36P36531 177 aa5.58□□□□□ -1.52
LSC1YOR142W GPX2P38143 162 aa5.58□□□□□ -1.52
LSC1YOR142W CCZ1P38273 704 aa5.58□□□□□ -1.52
LSC1YOR142W SGN1P40561 250 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
LSC1YOR142W RBL2P48606 106 aaKnown RBP5.58□□□□□ -1.52
LSC1YOR142W SCW4P53334 386 aaKnown RBP5.58□□□□□ -1.52
LSC1YOR142W APJ1P53940 528 aa5.58□□□□□ -1.52
LSC1YOR142W RCF1Q03713 159 aa5.58□□□□□ -1.52
LSC1YOR142W CAC2Q04199 468 aa5.58□□□□□ -1.52
LSC1YOR142W PIN3Q06449 215 aa5.58□□□□□ -1.52
LSC1YOR142W MRPL35Q06678 367 aa5.58□□□□□ -1.52
LSC1YOR142W MRX9Q07349 420 aaKnown RBP5.58□□□□□ -1.52
LSC1YOR142W ATG41Q12048 136 aa5.58□□□□□ -1.52
LSC1YOR142W FCY22Q12119 530 aa5.58□□□□□ -1.52
LSC1YOR142W EAF3Q12432 401 aa5.58□□□□□ -1.52
LSC1YOR142W PET18P25362 215 aa5.57□□□□□ -1.52
LSC1YOR142W YBR137WP38276 179 aa5.57□□□□□ -1.52
LSC1YOR142W UMP1P38293 148 aa5.57□□□□□ -1.52
LSC1YOR142W YHC3P47040 408 aa5.57□□□□□ -1.52
LSC1YOR142W SSN8P47821 323 aa5.57□□□□□ -1.52
LSC1YOR142W GEP7P53171 287 aa5.57□□□□□ -1.52
LSC1YOR142W SMM1P53720 384 aaKnown RBP5.57□□□□□ -1.52
LSC1YOR142W YNR064CP53750 290 aa5.57□□□□□ -1.52
LSC1YOR142W UTP15Q04305 513 aaKnown RBP5.57□□□□□ -1.52
LSC1YOR142W MGR3Q04472 501 aa5.57□□□□□ -1.52
LSC1YOR142W IES3Q12345 250 aa5.57□□□□□ -1.52
LSC1YOR142W YMR105W-AQ8TGS8 64 aa5.57□□□□□ -1.52
LSC1YOR142W APA2P22108 325 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms