RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT8	YOL048C	IPP1	P00817	287 aa	Known RBP	7.65	□□□□□ -1.18
RRT8	YOL048C	DSF1	P0CX08	502 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	YNR073C	P0CX09	502 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	MCM1	P11746	286 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	SAR1	P20606	190 aa	Known RBP	7.65	□□□□□ -1.18
RRT8	YOL048C	BOL3	P39724	118 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	AVT7	P40501	490 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	BXI1	P48558	297 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	AVT4	P50944	713 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	YGL159W	P53110	370 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	GIM3	P53900	129 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	TY1A-MR1	Q04215	440 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	COX17	Q12287	69 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	ERP4	Q12450	207 aa		7.65	□□□□□ -1.18
RRT8	YOL048C	FOL3	Q12676	427 aa	Predicted RBP	7.65	□□□□□ -1.18
RRT8	YOL048C	TDH2	P00358	332 aa	Known RBP	7.64	□□□□□ -1.19
RRT8	YOL048C	HEM4	P06174	275 aa		7.64	□□□□□ -1.19
RRT8	YOL048C	YCP4	P25349	247 aa	Known RBP	7.64	□□□□□ -1.19
RRT8	YOL048C	MRPS5	P33759	307 aa		7.64	□□□□□ -1.19
RRT8	YOL048C	MRPL3	P36516	390 aa		7.64	□□□□□ -1.19
RRT8	YOL048C	APL3	P38065	1025 aa		7.64	□□□□□ -1.19
RRT8	YOL048C	TAT1	P38085	619 aa		7.64	□□□□□ -1.19
RRT8	YOL048C	MOB2	P43563	287 aa		7.64	□□□□□ -1.19
RRT8	YOL048C	ARG5,6	Q01217	863 aa		7.64	□□□□□ -1.19
RRT8	YOL048C	RPL6A	Q02326	176 aa	Known RBP	7.64	□□□□□ -1.19
RRT8	YOL048C	HNT1	Q04344	158 aa	Known RBP	7.64	□□□□□ -1.19
RRT8	YOL048C	GLT1	Q12680	2145 aa	Known RBP	7.64	□□□□□ -1.19
RRT8	YOL048C	RPL30	P14120	105 aa	Known RBP	7.63	□□□□□ -1.19
RRT8	YOL048C	ARO3	P14843	370 aa	Known RBP	7.63	□□□□□ -1.19
RRT8	YOL048C	URA6	P15700	204 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	CDC23	P16522	626 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	ATG22	P25568	528 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	ACH1	P32316	526 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	PPG1	P32838	368 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	TCM62	P38228	572 aa	Known RBP	7.63	□□□□□ -1.19
RRT8	YOL048C	BUD8	P41698	603 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	OTU1	P43558	301 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	PHB2	P50085	310 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	MTL1	P53214	551 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	RSM27	P53305	110 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	TY1A-DR2	Q03964	440 aa	Known RBP	7.63	□□□□□ -1.19
RRT8	YOL048C	YPR196W	Q06595	470 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	TGS1	Q12052	315 aa		7.63	□□□□□ -1.19
RRT8	YOL048C	USB1	Q12208	290 aa	Known RBP	7.63	□□□□□ -1.19
RRT8	YOL048C	GRX2	P17695	143 aa	Known RBP	7.62	□□□□□ -1.19
RRT8	YOL048C	VMA5	P31412	392 aa	Known RBP	7.62	□□□□□ -1.19
RRT8	YOL048C	PPZ2	P33329	710 aa		7.62	□□□□□ -1.19
RRT8	YOL048C	YND1	P40009	630 aa		7.62	□□□□□ -1.19
RRT8	YOL048C	YPL077C	Q02831	240 aa		7.62	□□□□□ -1.19
RRT8	YOL048C	NGL2	Q03264	515 aa	Known RBP	7.62	□□□□□ -1.19
RRT8	YOL048C	CRR1	Q05790	422 aa		7.62	□□□□□ -1.19
RRT8	YOL048C	ENV7	Q12003	364 aa		7.62	□□□□□ -1.19
RRT8	YOL048C	RNH203	Q12338	110 aa		7.62	□□□□□ -1.19
RRT8	YOL048C	FSH3	Q99369	266 aa		7.62	□□□□□ -1.19
RRT8	YOL048C	RPL6B	P05739	176 aa	Known RBP	7.61	□□□□□ -1.19
RRT8	YOL048C	RPL3	P14126	387 aa	Known RBP	7.61	□□□□□ -1.19
RRT8	YOL048C	MAK32	P23060	363 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	ARO4	P32449	370 aa	Known RBP	7.61	□□□□□ -1.19
RRT8	YOL048C	VAM7	P32912	316 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	YKL063C	P35725	167 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	MCH2	P36032	473 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	YMR262W	P38430	313 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	YER084W	P40057	128 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	PIG2	P40187	538 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	FLX1	P40464	311 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	RSC58	Q07979	502 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	FIT3	Q08907	204 aa		7.61	□□□□□ -1.19
RRT8	YOL048C	YBR056W-A	I2HB52	66 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	YLR358C	O13565	187 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	REP2	P03872	296 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	CHO1	P08456	276 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	ATG15	P25641	520 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	DEG1	P31115	442 aa	Known RBP	7.6	□□□□□ -1.19
RRT8	YOL048C	MSS1	P32559	526 aa	Predicted RBP	7.6	□□□□□ -1.19
RRT8	YOL048C	PPQ1	P32945	549 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	SRL3	P36167	246 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	GPI16	P38875	610 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	SIP18	P50263	79 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	GPG1	P53130	126 aa		7.6	□□□□□ -1.19
RRT8	YOL048C	MSI1	P13712	422 aa		7.59	□□□□□ -1.19
RRT8	YOL048C	DIT1	P21623	536 aa		7.59	□□□□□ -1.19
RRT8	YOL048C	RFA3	P26755	122 aa	Known RBP	7.59	□□□□□ -1.19
RRT8	YOL048C	ARO9	P38840	513 aa	Predicted RBP	7.59	□□□□□ -1.19
RRT8	YOL048C	GNA1	P43577	159 aa	Predicted RBP	7.59	□□□□□ -1.19
RRT8	YOL048C	HHT1	P61830	136 aa		7.59	□□□□□ -1.19
RRT8	YOL048C	VBA1	Q04301	562 aa		7.59	□□□□□ -1.19
RRT8	YOL048C	MRX9	Q07349	420 aa	Known RBP	7.59	□□□□□ -1.19
RRT8	YOL048C	RFU1	Q08003	200 aa		7.59	□□□□□ -1.19
RRT8	YOL048C	NCE102	Q12207	173 aa	RIP-Chip data	7.59	□□□□□ -1.19	not detected
RRT8	YOL048C	CLB6	P32943	380 aa		7.58	□□□□□ -1.2
RRT8	YOL048C	PAN3	P36102	679 aa	Predicted RBP	7.58	□□□□□ -1.2
RRT8	YOL048C	QDR1	P40475	563 aa		7.58	□□□□□ -1.2
RRT8	YOL048C	UBC13	P52490	153 aa		7.58	□□□□□ -1.2
RRT8	YOL048C	UFD1	P53044	361 aa		7.58	□□□□□ -1.2
RRT8	YOL048C	NSA1	P53136	463 aa	Predicted RBP	7.58	□□□□□ -1.2
RRT8	YOL048C	ALG12	P53730	551 aa		7.58	□□□□□ -1.2
RRT8	YOL048C	MRPS16	Q02608	121 aa		7.58	□□□□□ -1.2
RRT8	YOL048C	HAS1	Q03532	505 aa	Known RBP	7.58	□□□□□ -1.2
RRT8	YOL048C	YML018C	Q03730	393 aa		7.58	□□□□□ -1.2
RRT8	YOL048C	RPL25	P04456	142 aa	Known RBP	7.57	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms