RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YLR173WQ06247 608 aa1.94□□□□□ -2.1
SMD2YLR275W YOR029WQ12243 111 aa1.94□□□□□ -2.1
SMD2YLR275W YPL247CQ12523 523 aa1.94□□□□□ -2.1
SMD2YLR275W YBL008W-AQ3E821 79 aa1.94□□□□□ -2.1
SMD2YLR275W GDH2P33327 1092 aaKnown RBP1.93□□□□□ -2.1
SMD2YLR275W MRPL49P40858 161 aaPredicted RBP1.93□□□□□ -2.1
SMD2YLR275W GON7P46984 123 aa1.93□□□□□ -2.1
SMD2YLR275W MDM34P53083 459 aa1.93□□□□□ -2.1
SMD2YLR275W EMI1Q04406 187 aa1.93□□□□□ -2.1
SMD2YLR275W YMR114CQ04471 368 aaKnown RBP1.93□□□□□ -2.1
SMD2YLR275W YPR147CQ06522 304 aaKnown RBP1.93□□□□□ -2.1
SMD2YLR275W MED4Q12343 284 aa1.93□□□□□ -2.1
SMD2YLR275W YHR086W-AQ3E746 53 aa1.93□□□□□ -2.1
SMD2YLR275W HOM6P31116 359 aaKnown RBP1.92□□□□□ -2.1
SMD2YLR275W SGE1P33335 543 aa1.92□□□□□ -2.1
SMD2YLR275W DRE2P36152 348 aa1.92□□□□□ -2.1
SMD2YLR275W ECM13P38195 257 aa1.92□□□□□ -2.1
SMD2YLR275W SSH1P38353 490 aaKnown RBP1.92□□□□□ -2.1
SMD2YLR275W GRE3P38715 327 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SMD2YLR275W GLG2P47011 380 aa1.92□□□□□ -2.1
SMD2YLR275W USE1P53146 245 aa1.92□□□□□ -2.1
SMD2YLR275W MRPL50P53724 139 aa1.92□□□□□ -2.1
SMD2YLR275W DCR2Q05924 578 aa1.92□□□□□ -2.1
SMD2YLR275W YPR098CQ06089 161 aa1.92□□□□□ -2.1
SMD2YLR275W RRS1Q08746 203 aaKnown RBP1.92□□□□□ -2.1
SMD2YLR275W MSH5Q12175 901 aa1.92□□□□□ -2.1
SMD2YLR275W YPR011CQ12251 326 aa1.92□□□□□ -2.1
SMD2YLR275W GEP5Q12393 293 aa1.92□□□□□ -2.1
SMD2YLR275W EMC6Q12431 108 aa1.92□□□□□ -2.1
SMD2YLR275W ADH3P07246 375 aaKnown RBP1.91□□□□□ -2.1
SMD2YLR275W YKR104WP0CE69 306 aa1.91□□□□□ -2.1
SMD2YLR275W PPH21P23594 369 aa1.91□□□□□ -2.1
SMD2YLR275W FZO1P38297 855 aa1.91□□□□□ -2.1
SMD2YLR275W YHL026CP38740 315 aa1.91□□□□□ -2.1
SMD2YLR275W SNZ3P43545 298 aa1.91□□□□□ -2.1
SMD2YLR275W GOT1Q03554 138 aa1.91□□□□□ -2.1
SMD2YLR275W YDR124WQ04608 324 aa1.91□□□□□ -2.1
SMD2YLR275W PAM18Q07914 168 aa1.91□□□□□ -2.1
SMD2YLR275W COQ10Q08058 207 aa1.91□□□□□ -2.1
SMD2YLR275W CSM4Q08955 156 aa1.91□□□□□ -2.1
SMD2YLR275W EHD3P28817 500 aa1.9□□□□□ -2.11
SMD2YLR275W MRPL39P36533 70 aa1.9□□□□□ -2.11
SMD2YLR275W YJL027CP47063 138 aaPredicted RBP1.9□□□□□ -2.11
SMD2YLR275W MRH4P53166 561 aa1.9□□□□□ -2.11
SMD2YLR275W SNZ2P53824 298 aa1.9□□□□□ -2.11
SMD2YLR275W CTF19Q02732 369 aa1.9□□□□□ -2.11
SMD2YLR275W RRP40Q08285 240 aaKnown RBP1.9□□□□□ -2.11
SMD2YLR275W YCT1Q12235 531 aa1.9□□□□□ -2.11
SMD2YLR275W SNU23Q12368 194 aaPredicted RBP1.9□□□□□ -2.11
SMD2YLR275W YBR096WP38256 230 aa1.89□□□□□ -2.11
SMD2YLR275W GOS1P38736 223 aa1.89□□□□□ -2.11
SMD2YLR275W YHB1P39676 399 aaKnown RBP1.89□□□□□ -2.11
SMD2YLR275W FCY21P40039 528 aa1.89□□□□□ -2.11
SMD2YLR275W TIF34P40217 347 aaKnown RBP1.89□□□□□ -2.11
SMD2YLR275W FMC1P40491 155 aa1.89□□□□□ -2.11
SMD2YLR275W YGL034CP53186 121 aa1.89□□□□□ -2.11
SMD2YLR275W RHO3Q00245 231 aaKnown RBP1.89□□□□□ -2.11
SMD2YLR275W SPG4Q04438 115 aa1.89□□□□□ -2.11
SMD2YLR275W YLR179CQ06252 201 aaKnown RBP1.89□□□□□ -2.11
SMD2YLR275W SYC1Q08553 188 aaPredicted RBP1.89□□□□□ -2.11
SMD2YLR275W ATG31Q12421 196 aa1.89□□□□□ -2.11
SMD2YLR275W SEC22P22214 214 aa1.88□□□□□ -2.11
SMD2YLR275W YOR062CP36025 268 aa1.88□□□□□ -2.11
SMD2YLR275W BFR1P38934 470 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
SMD2YLR275W THO1P40040 218 aaKnown RBP1.88□□□□□ -2.11
SMD2YLR275W SRL4Q03085 281 aa1.88□□□□□ -2.11
SMD2YLR275W KRE28Q04431 385 aa1.88□□□□□ -2.11
SMD2YLR275W EMP46Q12396 444 aa1.88□□□□□ -2.11
SMD2YLR275W SWI1P09547 1314 aa1.88□□□□□ -2.11
SMD2YLR275W TCP1P12612 559 aaKnown RBP1.87□□□□□ -2.11
SMD2YLR275W RCN1P36054 211 aa1.87□□□□□ -2.11
SMD2YLR275W YER189WP40104 122 aa1.87□□□□□ -2.11
SMD2YLR275W OST2P46964 130 aa1.87□□□□□ -2.11
SMD2YLR275W HOC1P47124 396 aa1.87□□□□□ -2.11
SMD2YLR275W JHD2P47156 728 aaPredicted RBP1.87□□□□□ -2.11
SMD2YLR275W PET117Q02771 107 aa1.87□□□□□ -2.11
SMD2YLR275W PEX12Q04370 399 aa1.87□□□□□ -2.11
SMD2YLR275W BBP1Q12365 385 aa1.87□□□□□ -2.11
SMD2YLR275W SAS5Q99314 248 aa1.87□□□□□ -2.11
SMD2YLR275W SGA1P08019 549 aa1.86□□□□□ -2.11
SMD2YLR275W YCR102CP25608 368 aa1.86□□□□□ -2.11
SMD2YLR275W YCR016WP25617 290 aaKnown RBP1.86□□□□□ -2.11
SMD2YLR275W SRB4P32569 687 aa1.86□□□□□ -2.11
SMD2YLR275W YHR127WP38833 243 aaKnown RBP1.86□□□□□ -2.11
SMD2YLR275W LIA1P47120 325 aaKnown RBP1.86□□□□□ -2.11
SMD2YLR275W YJR079WP47126 109 aa1.86□□□□□ -2.11
SMD2YLR275W YOR186WQ08560 144 aa1.86□□□□□ -2.11
SMD2YLR275W YLR462WO13556 202 aa1.85□□□□□ -2.11
SMD2YLR275W MSN4P33749 630 aa1.85□□□□□ -2.11
SMD2YLR275W LDB7P38210 180 aa1.85□□□□□ -2.11
SMD2YLR275W COS8P38723 381 aa1.85□□□□□ -2.11
SMD2YLR275W YEL075CP39972 122 aa1.85□□□□□ -2.11
SMD2YLR275W NUP84P52891 726 aa1.85□□□□□ -2.11
SMD2YLR275W RSM10Q03201 203 aa1.85□□□□□ -2.11
SMD2YLR275W CFT1Q06632 1357 aaKnown RBP1.85□□□□□ -2.11
SMD2YLR275W MRPL25P23369 157 aa1.84□□□□□ -2.11
SMD2YLR275W SCM4P32564 187 aa1.84□□□□□ -2.11
SMD2YLR275W MSA2P36157 363 aa1.84□□□□□ -2.11
SMD2YLR275W YFR054CP43622 192 aa1.84□□□□□ -2.11
SMD2YLR275W SEI1Q06058 285 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms