RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C NSA1P53136 463 aaPredicted RBP2.07□□□□□ -2.08
NYV1YLR093C TOS8P53147 276 aa2.07□□□□□ -2.08
NYV1YLR093C MRH4P53166 561 aa2.07□□□□□ -2.08
NYV1YLR093C SNZ2P53824 298 aa2.07□□□□□ -2.08
NYV1YLR093C SEI1Q06058 285 aa2.07□□□□□ -2.08
NYV1YLR093C YOL029CQ08187 201 aa2.07□□□□□ -2.08
NYV1YLR093C ABP140Q08641 628 aaKnown RBP2.07□□□□□ -2.08
NYV1YLR093C RRS1Q08746 203 aaKnown RBP2.07□□□□□ -2.08
NYV1YLR093C YAL067W-AQ8TGK6 75 aa2.07□□□□□ -2.08
NYV1YLR093C YPL229WQ99395 206 aa2.07□□□□□ -2.08
NYV1YLR093C QCR7P00128 127 aa2.06□□□□□ -2.08
NYV1YLR093C PHO80P20052 293 aa2.06□□□□□ -2.08
NYV1YLR093C OSM1P21375 501 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C RFA3P26755 122 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C GDH2P33327 1092 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C DBP7P36120 742 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C YHI9P38765 294 aa2.06□□□□□ -2.08
NYV1YLR093C YHR127WP38833 243 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C ASP1P38986 381 aaPredicted RBP2.06□□□□□ -2.08
NYV1YLR093C AVT6P40074 448 aa2.06□□□□□ -2.08
NYV1YLR093C YIR035CP40579 254 aa2.06□□□□□ -2.08
NYV1YLR093C MCM22P47167 239 aa2.06□□□□□ -2.08
NYV1YLR093C COQ5P49017 307 aa2.06□□□□□ -2.08
NYV1YLR093C YGL034CP53186 121 aa2.06□□□□□ -2.08
NYV1YLR093C NOP19P53317 196 aaPredicted RBP2.06□□□□□ -2.08
NYV1YLR093C AAH1P53909 347 aa2.06□□□□□ -2.08
NYV1YLR093C YNL046WP53956 172 aa2.06□□□□□ -2.08
NYV1YLR093C RHO3Q00245 231 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C SPG4Q04438 115 aa2.06□□□□□ -2.08
NYV1YLR093C YDR222WQ04925 415 aa2.06□□□□□ -2.08
NYV1YLR093C ARC18Q05933 178 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C SMD2Q06217 110 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C CLP1Q08685 445 aaPredicted RBP2.06□□□□□ -2.08
NYV1YLR093C YRA1Q12159 226 aaKnown RBP2.06□□□□□ -2.08
NYV1YLR093C TPO4Q12256 659 aa2.06□□□□□ -2.08
NYV1YLR093C YLR126CQ12288 251 aa2.06□□□□□ -2.08
NYV1YLR093C ATG5Q12380 294 aa2.06□□□□□ -2.08
NYV1YLR093C HTB1P02293 131 aaKnown RBP2.05□□□□□ -2.08
NYV1YLR093C HTB2P02294 131 aa2.05□□□□□ -2.08
NYV1YLR093C RPL27AP0C2H6 136 aaKnown RBP2.05□□□□□ -2.08
NYV1YLR093C RPL27BP0C2H7 136 aaKnown RBP2.05□□□□□ -2.08
NYV1YLR093C CBF1P17106 351 aa2.05□□□□□ -2.08
NYV1YLR093C ERD2P18414 219 aa2.05□□□□□ -2.08
NYV1YLR093C COX10P21592 462 aa2.05□□□□□ -2.08
NYV1YLR093C ERG2P32352 222 aa2.05□□□□□ -2.08
NYV1YLR093C SSO1P32867 290 aa2.05□□□□□ -2.08
NYV1YLR093C SGE1P33335 543 aa2.05□□□□□ -2.08
NYV1YLR093C DRE2P36152 348 aa2.05□□□□□ -2.08
NYV1YLR093C YHL044WP38727 235 aa2.05□□□□□ -2.08
NYV1YLR093C IKI1P38874 309 aa2.05□□□□□ -2.08
NYV1YLR093C SYS1P41544 203 aa2.05□□□□□ -2.08
NYV1YLR093C ADO1P47143 340 aaKnown RBP2.05□□□□□ -2.08
NYV1YLR093C OST3P48439 350 aa2.05□□□□□ -2.08
NYV1YLR093C TRM9P49957 279 aa2.05□□□□□ -2.08
NYV1YLR093C UFD1P53044 361 aa2.05□□□□□ -2.08
NYV1YLR093C ALG13P53178 202 aa2.05□□□□□ -2.08
NYV1YLR093C SLX9P53251 210 aaPredicted RBP2.05□□□□□ -2.08
NYV1YLR093C PEX10Q05568 337 aa2.05□□□□□ -2.08
NYV1YLR093C YPR147CQ06522 304 aaKnown RBP2.05□□□□□ -2.08
NYV1YLR093C YOR186WQ08560 144 aa2.05□□□□□ -2.08
NYV1YLR093C MET2P08465 486 aa2.04□□□□□ -2.08
NYV1YLR093C SIR4P11978 1358 aa2.04□□□□□ -2.08
NYV1YLR093C ARC19P33204 171 aaKnown RBP2.04□□□□□ -2.08
NYV1YLR093C SRY1P36007 326 aa2.04□□□□□ -2.08
NYV1YLR093C PHO89P38361 574 aa2.04□□□□□ -2.08
NYV1YLR093C ARN2P38724 620 aa2.04□□□□□ -2.08
NYV1YLR093C EDC2P40023 145 aaPredicted RBP2.04□□□□□ -2.08
NYV1YLR093C UFE1P41834 346 aa2.04□□□□□ -2.08
NYV1YLR093C NUP57P48837 541 aa2.04□□□□□ -2.08
NYV1YLR093C BRR6P53062 197 aa2.04□□□□□ -2.08
NYV1YLR093C YGL118CP53132 145 aa2.04□□□□□ -2.08
NYV1YLR093C GET1P53192 235 aa2.04□□□□□ -2.08
NYV1YLR093C HST4P53688 370 aa2.04□□□□□ -2.08
NYV1YLR093C OSH6Q02201 448 aa2.04□□□□□ -2.08
NYV1YLR093C YPL039WQ03080 316 aa2.04□□□□□ -2.08
NYV1YLR093C TUS1Q06412 1307 aa2.04□□□□□ -2.08
NYV1YLR093C HRT1Q08273 121 aa2.04□□□□□ -2.08
NYV1YLR093C RRP40Q08285 240 aaKnown RBP2.04□□□□□ -2.08
NYV1YLR093C SYC1Q08553 188 aaPredicted RBP2.04□□□□□ -2.08
NYV1YLR093C JLP1Q12358 412 aa2.04□□□□□ -2.08
NYV1YLR093C RAD9P14737 1309 aa2.03□□□□□ -2.08
NYV1YLR093C RPL28P02406 149 aaKnown RBP2.03□□□□□ -2.08
NYV1YLR093C IDH1P28834 360 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
NYV1YLR093C CSG2P35206 410 aa2.03□□□□□ -2.08
NYV1YLR093C YBL081WP38180 368 aaKnown RBP2.03□□□□□ -2.08
NYV1YLR093C ECM34P38728 170 aa2.03□□□□□ -2.08
NYV1YLR093C EGD2P38879 174 aaKnown RBP2.03□□□□□ -2.08
NYV1YLR093C YHB1P39676 399 aaKnown RBP2.03□□□□□ -2.08
NYV1YLR093C YIL054WP40524 105 aa2.03□□□□□ -2.08
NYV1YLR093C RMR1P53060 241 aa2.03□□□□□ -2.08
NYV1YLR093C SYF2P53277 215 aaPredicted RBP2.03□□□□□ -2.08
NYV1YLR093C SWT21P53873 357 aaPredicted RBP2.03□□□□□ -2.08
NYV1YLR093C FAR8Q05040 523 aa2.03□□□□□ -2.08
NYV1YLR093C TIM22Q12328 207 aa2.03□□□□□ -2.08
NYV1YLR093C YBL112CQ3E7Y4 105 aa2.03□□□□□ -2.08
NYV1YLR093C YHR139C-AO13536 103 aa2.02□□□□□ -2.09
NYV1YLR093C URA6P15700 204 aa2.02□□□□□ -2.09
NYV1YLR093C PPH21P23594 369 aa2.02□□□□□ -2.09
NYV1YLR093C PRE7P23724 241 aaKnown RBP2.02□□□□□ -2.09
NYV1YLR093C ATP7P30902 174 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms