RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeast

Gene BUD28, Length 378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD28	YLR062C	ARC40	P38328	384 aa	Known RBP	4.26	□□□□□ -1.73
BUD28	YLR062C	FMC1	P40491	155 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
BUD28	YLR062C	PMT6	P42934	759 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	CIN2	P46670	268 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	PAU12	P53343	120 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	YLR152C	P54072	576 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	YDR514C	Q04408	483 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	TSR2	Q06672	205 aa	Known RBP	4.26	□□□□□ -1.73
BUD28	YLR062C	RFU1	Q08003	200 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	CSI2	Q08054	341 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	GSH2	Q08220	491 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	YOL114C	Q12322	202 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	ERP4	Q12450	207 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	FRE6	Q12473	712 aa		4.26	□□□□□ -1.73
BUD28	YLR062C	COX9	P07255	59 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	ENA1	P13587	1091 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	SAG1	P20840	650 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	HXT2	P23585	541 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	VMA11	P32842	164 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	MTC2	P34246	357 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	PAU24	P38155	120 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	TCM62	P38228	572 aa	Known RBP	4.25	□□□□□ -1.73
BUD28	YLR062C	DLS1	P40366	167 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	MSS2	P40990	351 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	YHC3	P47040	408 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	BNA2	P47125	453 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	YGL204C	P53089	101 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	YGL159W	P53110	370 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	SLI1	P53304	468 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	SMM1	P53720	384 aa	Known RBP	4.25	□□□□□ -1.73
BUD28	YLR062C	NRK1	P53915	240 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	RNH201	P53942	307 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	ENA2	Q01896	1091 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	HLR1	Q04429	423 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	FRE5	Q08908	694 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	YPR1	Q12458	312 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	ENA5	Q12691	1091 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	MED11	Q99278	115 aa		4.25	□□□□□ -1.73
BUD28	YLR062C	SGA1	P08019	549 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	MRP1	P10662	321 aa	Known RBP	4.24	□□□□□ -1.73
BUD28	YLR062C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
BUD28	YLR062C	FUN26	P31381	517 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	AFG1	P32317	509 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	VPS17	P32913	551 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	PPZ2	P33329	710 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	TIF3	P34167	436 aa	Known RBP	4.24	□□□□□ -1.73
BUD28	YLR062C	ZRT3	P34240	503 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	CCZ1	P38273	704 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	SDS24	P38314	527 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	GZF3	P42944	551 aa	Known RBP	4.24	□□□□□ -1.73
BUD28	YLR062C	PAM16	P42949	149 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	LYS20	P48570	428 aa	Known RBP	4.24	□□□□□ -1.73
BUD28	YLR062C	YIP4	P53093	235 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	GEP7	P53171	287 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	YDR248C	Q03786	193 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	YMR252C	Q04814	134 aa		4.24	□□□□□ -1.73
BUD28	YLR062C	LUC7	Q07508	261 aa	Predicted RBP	4.24	□□□□□ -1.73
BUD28	YLR062C	LYS21	Q12122	440 aa	Known RBP	4.24	□□□□□ -1.73
BUD28	YLR062C	TDH2	P00358	332 aa	Known RBP	4.23	□□□□□ -1.73
BUD28	YLR062C	DOA4	P32571	926 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	MTH1	P35198	433 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	SSH1	P38353	490 aa	Known RBP	4.23	□□□□□ -1.73
BUD28	YLR062C	SSZ1	P38788	538 aa	Known RBP	4.23	□□□□□ -1.73
BUD28	YLR062C	PTC7	P38797	343 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	NVJ1	P38881	321 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	RMD6	P39975	231 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	AVT6	P40074	448 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	PDS1	P40316	373 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD28	YLR062C	SLM1	P40485	686 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	ERJ5	P43613	295 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD28	YLR062C	GON7	P46984	123 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	TAF4	P50105	388 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	YNR064C	P53750	290 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	YKR005C	Q02203	525 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	PRM15	Q03262	622 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	YDR114C	Q04597	100 aa		4.23	□□□□□ -1.73
BUD28	YLR062C	NMA1	Q06178	401 aa	Known RBP	4.23	□□□□□ -1.73
BUD28	YLR062C	MET17	P06106	444 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	GCD1	P09032	578 aa	Predicted RBP	4.22	□□□□□ -1.73
BUD28	YLR062C	MATALPHA1	P0CY06	175 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	HMLALPHA1	P0CY07	175 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	PRE7	P23724	241 aa	Known RBP	4.22	□□□□□ -1.73
BUD28	YLR062C	GPI18	P38211	433 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	YND1	P40009	630 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	YER079W	P40052	210 aa	Known RBP	4.22	□□□□□ -1.73
BUD28	YLR062C	YER188W	P40103	239 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	RIO2	P40160	425 aa	Known RBP	4.22	□□□□□ -1.73
BUD28	YLR062C	AVT4	P50944	713 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	POP6	P53218	158 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	APJ1	P53940	528 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	RIM9	Q04734	239 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	YMR317W	Q04893	1140 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	ASR1	Q06834	288 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	HEM25	Q07534	307 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	YOR029W	Q12243	111 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	YMR105W-A	Q8TGS8	64 aa		4.22	□□□□□ -1.73
BUD28	YLR062C	CDC28	P00546	298 aa	Known RBP	4.21	□□□□□ -1.74
BUD28	YLR062C	SIR2	P06700	562 aa		4.21	□□□□□ -1.74
BUD28	YLR062C	AHC2	P25649	128 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 926.9 ms