RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C NOT5Q12514 560 aaPredicted RBP1.45□□□□□ -2.18
CMS1YLR003C RPL26AP05743 127 aaKnown RBP1.44□□□□□ -2.18
CMS1YLR003C DPM1P14020 267 aaKnown RBP1.44□□□□□ -2.18
CMS1YLR003C RNA15P25299 296 aaPredicted RBP1.44□□□□□ -2.18
CMS1YLR003C CLB6P32943 380 aa1.44□□□□□ -2.18
CMS1YLR003C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
CMS1YLR003C ECM13P38195 257 aa1.44□□□□□ -2.18
CMS1YLR003C SMB1P40018 196 aaKnown RBP1.44□□□□□ -2.18
CMS1YLR003C YJL016WP47072 561 aa1.44□□□□□ -2.18
CMS1YLR003C RPL26BP53221 127 aaKnown RBP1.44□□□□□ -2.18
CMS1YLR003C YNL134CP53912 376 aaKnown RBP1.44□□□□□ -2.18
CMS1YLR003C VPS68Q12016 184 aa1.44□□□□□ -2.18
CMS1YLR003C SAS5Q99314 248 aa1.44□□□□□ -2.18
CMS1YLR003C PPH21P23594 369 aa1.43□□□□□ -2.18
CMS1YLR003C RCN1P36054 211 aa1.43□□□□□ -2.18
CMS1YLR003C DRE2P36152 348 aa1.43□□□□□ -2.18
CMS1YLR003C FZO1P38297 855 aa1.43□□□□□ -2.18
CMS1YLR003C YHL026CP38740 315 aa1.43□□□□□ -2.18
CMS1YLR003C YAR1P46683 200 aa1.43□□□□□ -2.18
CMS1YLR003C YGL034CP53186 121 aa1.43□□□□□ -2.18
CMS1YLR003C CTF19Q02732 369 aa1.43□□□□□ -2.18
CMS1YLR003C PEX12Q04370 399 aa1.43□□□□□ -2.18
CMS1YLR003C SDO1Q07953 250 aaKnown RBP1.43□□□□□ -2.18
CMS1YLR003C SNU23Q12368 194 aaPredicted RBP1.43□□□□□ -2.18
CMS1YLR003C MHT1Q12525 324 aa1.43□□□□□ -2.18
CMS1YLR003C MSF1P08425 469 aa1.42□□□□□ -2.18
CMS1YLR003C TCP1P12612 559 aaKnown RBP1.42□□□□□ -2.18
CMS1YLR003C SCO1P23833 295 aa1.42□□□□□ -2.18
CMS1YLR003C PRS4P38063 326 aaPredicted RBP1.42□□□□□ -2.18
CMS1YLR003C COG3P40094 801 aa1.42□□□□□ -2.18
CMS1YLR003C SNZ2P53824 298 aa1.42□□□□□ -2.18
CMS1YLR003C SPG4Q04438 115 aa1.42□□□□□ -2.18
CMS1YLR003C YHR086W-AQ3E746 53 aa1.42□□□□□ -2.18
CMS1YLR003C YHR032W-AP0C5N6 59 aa1.41□□□□□ -2.18
CMS1YLR003C HOM6P31116 359 aaKnown RBP1.41□□□□□ -2.18
CMS1YLR003C MSA2P36157 363 aa1.41□□□□□ -2.18
CMS1YLR003C GOS1P38736 223 aa1.41□□□□□ -2.18
CMS1YLR003C YHB1P39676 399 aaKnown RBP1.41□□□□□ -2.18
CMS1YLR003C GLG2P47011 380 aa1.41□□□□□ -2.18
CMS1YLR003C SNX4P47057 423 aa1.41□□□□□ -2.18
CMS1YLR003C DAN1P47178 298 aa1.41□□□□□ -2.18
CMS1YLR003C CAB4P53332 305 aa1.41□□□□□ -2.18
CMS1YLR003C MRPL50P53724 139 aa1.41□□□□□ -2.18
CMS1YLR003C YLR173WQ06247 608 aa1.41□□□□□ -2.18
CMS1YLR003C SYC1Q08553 188 aaPredicted RBP1.41□□□□□ -2.18
CMS1YLR003C MSH5Q12175 901 aa1.41□□□□□ -2.18
CMS1YLR003C SNF8Q12483 233 aa1.41□□□□□ -2.18
CMS1YLR003C CFT1Q06632 1357 aaKnown RBP1.41□□□□□ -2.18
CMS1YLR003C MRX3P38172 270 aa1.4□□□□□ -2.19
CMS1YLR003C YBR096WP38256 230 aa1.4□□□□□ -2.19
CMS1YLR003C YHR127WP38833 243 aaKnown RBP1.4□□□□□ -2.19
CMS1YLR003C BFR1P38934 470 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
CMS1YLR003C OST2P46964 130 aa1.4□□□□□ -2.19
CMS1YLR003C MRH4P53166 561 aa1.4□□□□□ -2.19
CMS1YLR003C PAM18Q07914 168 aa1.4□□□□□ -2.19
CMS1YLR003C COQ10Q08058 207 aa1.4□□□□□ -2.19
CMS1YLR003C YCT1Q12235 531 aa1.4□□□□□ -2.19
CMS1YLR003C MED4Q12343 284 aa1.4□□□□□ -2.19
CMS1YLR003C IPP1P00817 287 aaKnown RBP1.39□□□□□ -2.19
CMS1YLR003C SGA1P08019 549 aa1.39□□□□□ -2.19
CMS1YLR003C PUT1P09368 476 aa1.39□□□□□ -2.19
CMS1YLR003C ERG24P32462 438 aaKnown RBP1.39□□□□□ -2.19
CMS1YLR003C VMA11P32842 164 aa1.39□□□□□ -2.19
CMS1YLR003C RPT5P33297 434 aaKnown RBP1.39□□□□□ -2.19
CMS1YLR003C COS8P38723 381 aa1.39□□□□□ -2.19
CMS1YLR003C TIF34P40217 347 aaKnown RBP1.39□□□□□ -2.19
CMS1YLR003C ARC15P40518 154 aaRIP-Chip data1.39□□□□□ -2.19not detected
CMS1YLR003C MRPL49P40858 161 aaPredicted RBP1.39□□□□□ -2.19
CMS1YLR003C YGL159WP53110 370 aa1.39□□□□□ -2.19
CMS1YLR003C COS6P53344 381 aa1.39□□□□□ -2.19
CMS1YLR003C RRN5Q02983 363 aa1.39□□□□□ -2.19
CMS1YLR003C RSM10Q03201 203 aa1.39□□□□□ -2.19
CMS1YLR003C YOR283WQ12040 230 aaKnown RBP1.39□□□□□ -2.19
CMS1YLR003C EMC6Q12431 108 aa1.39□□□□□ -2.19
CMS1YLR003C DSF1P0CX08 502 aa1.38□□□□□ -2.19
CMS1YLR003C YNR073CP0CX09 502 aa1.38□□□□□ -2.19
CMS1YLR003C YCR102CP25608 368 aa1.38□□□□□ -2.19
CMS1YLR003C MSN4P33749 630 aa1.38□□□□□ -2.19
CMS1YLR003C YOR062CP36025 268 aa1.38□□□□□ -2.19
CMS1YLR003C NRG2P38082 220 aa1.38□□□□□ -2.19
CMS1YLR003C YER189WP40104 122 aa1.38□□□□□ -2.19
CMS1YLR003C YMR144WP40214 342 aaKnown RBP1.38□□□□□ -2.19
CMS1YLR003C YJL027CP47063 138 aaPredicted RBP1.38□□□□□ -2.19
CMS1YLR003C JHD2P47156 728 aaPredicted RBP1.38□□□□□ -2.19
CMS1YLR003C PET117Q02771 107 aa1.38□□□□□ -2.19
CMS1YLR003C CGI121Q03705 181 aaKnown RBP1.38□□□□□ -2.19
CMS1YLR003C YLR030WQ07967 263 aa1.38□□□□□ -2.19
CMS1YLR003C YLR126CQ12288 251 aa1.38□□□□□ -2.19
CMS1YLR003C EMP46Q12396 444 aa1.38□□□□□ -2.19
CMS1YLR003C ADH3P07246 375 aaKnown RBP1.37□□□□□ -2.19
CMS1YLR003C EHD3P28817 500 aa1.37□□□□□ -2.19
CMS1YLR003C SCM4P32564 187 aa1.37□□□□□ -2.19
CMS1YLR003C SRB4P32569 687 aa1.37□□□□□ -2.19
CMS1YLR003C GRE3P38715 327 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
CMS1YLR003C YHR125WP38831 101 aa1.37□□□□□ -2.19
CMS1YLR003C YJR079WP47126 109 aa1.37□□□□□ -2.19
CMS1YLR003C CSM4Q08955 156 aa1.37□□□□□ -2.19
CMS1YLR003C YPL257WQ08974 193 aa1.37□□□□□ -2.19
CMS1YLR003C YLR462WO13556 202 aa1.36□□□□□ -2.19
CMS1YLR003C YCR016WP25617 290 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms