RNA–Protein interactions for RNA: YJL151C

SNA3, Transcript of Protein involved in efficient MVB sorting of proteins to the vacuole, yeast

Gene SNA3, Length 402 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNA3	YJL151C	PRM4	Q12498	284 aa		6.59	□□□□□ -1.35
SNA3	YJL151C	RPS31	P05759	152 aa	Known RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	UBI4	P0CG63	381 aa	Known RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	RPL40A	P0CH08	128 aa	Known RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	RPL40B	P0CH09	128 aa	Known RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	MEK1	P24719	497 aa	Predicted RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	IMG2	P25642	146 aa	Predicted RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	ECM25	P32525	599 aa		6.58	□□□□□ -1.36
SNA3	YJL151C	EMP70	P32802	667 aa		6.58	□□□□□ -1.36
SNA3	YJL151C	FIG1	P38224	298 aa		6.58	□□□□□ -1.36
SNA3	YJL151C	LNP1	P38878	278 aa		6.58	□□□□□ -1.36
SNA3	YJL151C	QRI1	P43123	477 aa	Known RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	SOL1	P50278	321 aa		6.58	□□□□□ -1.36
SNA3	YJL151C	MTM1	P53320	366 aa		6.58	□□□□□ -1.36
SNA3	YJL151C	SEI1	Q06058	285 aa		6.58	□□□□□ -1.36
SNA3	YJL151C	SDO1	Q07953	250 aa	Known RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	YRA1	Q12159	226 aa	Known RBP	6.58	□□□□□ -1.36
SNA3	YJL151C	FAB1	P34756	2278 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	GAL1	P04385	528 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	SSA3	P09435	649 aa	Known RBP	6.57	□□□□□ -1.36
SNA3	YJL151C	ARF1	P11076	181 aa	Known RBP	6.57	□□□□□ -1.36
SNA3	YJL151C	RFA1	P22336	621 aa	Known RBP	6.57	□□□□□ -1.36
SNA3	YJL151C	MSK1	P32048	576 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	MCM10	P32354	571 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	YGL015C	P33199	130 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	SRP102	P36057	244 aa	Predicted RBP	6.57	□□□□□ -1.36
SNA3	YJL151C	SRX1	P36077	127 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	YER158C	P40095	573 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	RFC2	P40348	353 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	DLS1	P40366	167 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	ERJ5	P43613	295 aa	Predicted RBP	6.57	□□□□□ -1.36
SNA3	YJL151C	ASK10	P48361	1146 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	SUN4	P53616	420 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	AAH1	P53909	347 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	RNH201	P53942	307 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	YMR279C	Q03263	540 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	YMR253C	Q04835	414 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	RTT103	Q05543	409 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	MCT1	Q12283	360 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	HMS1	Q12398	434 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	ERP4	Q12450	207 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	YLR146W-A	Q2V2P1	62 aa		6.57	□□□□□ -1.36
SNA3	YJL151C	YSF3	P0C074	85 aa	Predicted RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	NAM2	P11325	894 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	SHM2	P37291	469 aa	Known RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	ATG8	P38182	117 aa	RIP-Chip data	6.56	□□□□□ -1.36	not detected
SNA3	YJL151C	PGD1	P40356	397 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	AIR1	P40507	360 aa	Known RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	GTT1	P40582	234 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	OYE3	P41816	400 aa	Predicted RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	SNO3	P43544	222 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	ADO1	P47143	340 aa	Known RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	SSN8	P47821	323 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	SRB7	P47822	140 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	ACT1	P60010	375 aa	Known RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	THI74	Q04083	370 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	HNT1	Q04344	158 aa	Known RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	THI73	Q07904	523 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	MIM1	Q08176	113 aa		6.56	□□□□□ -1.36
SNA3	YJL151C	PRP46	Q12417	451 aa	Predicted RBP	6.56	□□□□□ -1.36
SNA3	YJL151C	RPB3	P16370	318 aa	Known RBP	6.55	□□□□□ -1.36
SNA3	YJL151C	SCO1	P23833	295 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	FRM2	P37261	193 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	YBR013C	P38215	129 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	CFD1	P40558	293 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	TAX4	P47030	604 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	YJR056C	P47115	236 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	YJR115W	P47152	169 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	YJR141W	P47172	347 aa	Predicted RBP	6.55	□□□□□ -1.36
SNA3	YJL151C	NUP42	P49686	430 aa	Known RBP	6.55	□□□□□ -1.36
SNA3	YJL151C	APJ1	P53940	528 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	SAM50	P53969	484 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	APM1	Q00776	475 aa	Predicted RBP	6.55	□□□□□ -1.36
SNA3	YJL151C	YMR265C	Q03508	461 aa	Known RBP	6.55	□□□□□ -1.36
SNA3	YJL151C	CAB5	Q03941	241 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	MCH4	Q08268	501 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	RAD28	Q12021	506 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	FRE7	Q12333	620 aa		6.55	□□□□□ -1.36
SNA3	YJL151C	MET3	P08536	511 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	YLL053C	P0CD98	152 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	YML003W	P0CF16	290 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	YCR006C	P25350	157 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	YBL010C	P32788	280 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	NTF2	P33331	125 aa	Known RBP	6.54	□□□□□ -1.36
SNA3	YJL151C	COS9	P36034	407 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	APD1	P38281	316 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	YEA6	P39953	335 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	ATF1	P40353	525 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	POG1	P40473	351 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	VMA21	P41806	77 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	DAN1	P47178	298 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	TEX1	P53851	422 aa	Known RBP	6.54	□□□□□ -1.36
SNA3	YJL151C	RHO5	P53879	331 aa	Known RBP	6.54	□□□□□ -1.36
SNA3	YJL151C	MRPL22	P53881	309 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	CUZ1	P53899	274 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	GIM3	P53900	129 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	YCL001W-A	P87012	153 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	ADD37	Q03233	198 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	NNT1	Q05874	261 aa		6.54	□□□□□ -1.36
SNA3	YJL151C	YPR147C	Q06522	304 aa	Known RBP	6.54	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms