RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C FRM2P37261 193 aa3.03□□□□□ -1.92
VPS53YJL029C GPI18P38211 433 aa3.03□□□□□ -1.92
VPS53YJL029C AIM10P39965 576 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C GLR1P41921 483 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C BNA6P43619 295 aa3.03□□□□□ -1.92
VPS53YJL029C GEP7P53171 287 aa3.03□□□□□ -1.92
VPS53YJL029C PAU12P53343 120 aa3.03□□□□□ -1.92
VPS53YJL029C SMM1P53720 384 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C YOL114CQ12322 202 aa3.03□□□□□ -1.92
VPS53YJL029C YLR358CO13565 187 aa3.02□□□□□ -1.93
VPS53YJL029C COX5BP00425 151 aa3.02□□□□□ -1.93
VPS53YJL029C MATALPHA1P0CY06 175 aa3.02□□□□□ -1.93
VPS53YJL029C HMLALPHA1P0CY07 175 aa3.02□□□□□ -1.93
VPS53YJL029C MRP1P10662 321 aaKnown RBP3.02□□□□□ -1.93
VPS53YJL029C PUT3P25502 979 aaPredicted RBP3.02□□□□□ -1.93
VPS53YJL029C SHE1P38200 338 aa3.02□□□□□ -1.93
VPS53YJL029C GOS1P38736 223 aa3.02□□□□□ -1.93
VPS53YJL029C EGD2P38879 174 aaKnown RBP3.02□□□□□ -1.93
VPS53YJL029C SDP1P40479 209 aa3.02□□□□□ -1.93
VPS53YJL029C OST1P41543 476 aaKnown RBP3.02□□□□□ -1.93
VPS53YJL029C VOA1P53262 265 aa3.02□□□□□ -1.93
VPS53YJL029C AAH1P53909 347 aa3.02□□□□□ -1.93
VPS53YJL029C YPL067CQ02754 198 aa3.02□□□□□ -1.93
VPS53YJL029C SNZ1Q03148 297 aa3.02□□□□□ -1.93
VPS53YJL029C YMR099CQ03161 297 aaKnown RBP3.02□□□□□ -1.93
VPS53YJL029C GRX3Q03835 250 aa3.02□□□□□ -1.93
VPS53YJL029C FIN1Q03898 291 aa3.02□□□□□ -1.93
VPS53YJL029C SNA4Q07549 140 aa3.02□□□□□ -1.93
VPS53YJL029C RTN2Q12443 393 aa3.02□□□□□ -1.93
VPS53YJL029C Q0142Q9ZZW4 58 aa3.02□□□□□ -1.93
VPS53YJL029C SEC16P48415 2195 aaKnown RBP3.02□□□□□ -1.93
VPS53YJL029C RPL30P14120 105 aaKnown RBP3.02□□□□□ -1.93
VPS53YJL029C STE18P18852 110 aa3.02□□□□□ -1.93
VPS53YJL029C AFG1P32317 509 aa3.02□□□□□ -1.93
VPS53YJL029C DOA4P32571 926 aa3.02□□□□□ -1.93
VPS53YJL029C MCH2P36032 473 aa3.02□□□□□ -1.93
VPS53YJL029C ANR2P36090 516 aaPredicted RBP3.02□□□□□ -1.93
VPS53YJL029C FMP23P38231 175 aa3.02□□□□□ -1.93
VPS53YJL029C DDI1P40087 428 aa3.02□□□□□ -1.93
VPS53YJL029C MSS2P40990 351 aa3.02□□□□□ -1.93
VPS53YJL029C XPT1P47165 209 aa3.02□□□□□ -1.93
VPS53YJL029C YDR248CQ03786 193 aa3.02□□□□□ -1.93
VPS53YJL029C ECM18Q04623 453 aa3.02□□□□□ -1.93
VPS53YJL029C YMR254CQ04838 102 aa3.02□□□□□ -1.93
VPS53YJL029C YLR173WQ06247 608 aa3.02□□□□□ -1.93
VPS53YJL029C RNH203Q12338 110 aa3.02□□□□□ -1.93
VPS53YJL029C RTR2Q12378 196 aa3.02□□□□□ -1.93
VPS53YJL029C SGA1P08019 549 aa3.01□□□□□ -1.93
VPS53YJL029C PRE7P23724 241 aaKnown RBP3.01□□□□□ -1.93
VPS53YJL029C AHC2P25649 128 aa3.01□□□□□ -1.93
VPS53YJL029C SDS22P36047 338 aa3.01□□□□□ -1.93
VPS53YJL029C LNP1P38878 278 aa3.01□□□□□ -1.93
VPS53YJL029C LSM4P40070 187 aaKnown RBP3.01□□□□□ -1.93
VPS53YJL029C YER188WP40103 239 aa3.01□□□□□ -1.93
VPS53YJL029C BNA1P47096 177 aa3.01□□□□□ -1.93
VPS53YJL029C PUS4P48567 403 aaKnown RBP3.01□□□□□ -1.93
VPS53YJL029C MRX9Q07349 420 aaKnown RBP3.01□□□□□ -1.93
VPS53YJL029C GRC3Q07845 632 aa3.01□□□□□ -1.93
VPS53YJL029C YGK3Q12222 375 aaPredicted RBP3.01□□□□□ -1.93
VPS53YJL029C VMA6P32366 345 aaKnown RBP3.01□□□□□ -1.93
VPS53YJL029C NDC1P32500 655 aa3.01□□□□□ -1.93
VPS53YJL029C IES6P32617 166 aa3.01□□□□□ -1.93
VPS53YJL029C PPZ2P33329 710 aa3.01□□□□□ -1.93
VPS53YJL029C PEX32P38292 413 aa3.01□□□□□ -1.93
VPS53YJL029C SDS24P38314 527 aa3.01□□□□□ -1.93
VPS53YJL029C RIO2P40160 425 aaKnown RBP3.01□□□□□ -1.93
VPS53YJL029C DLS1P40366 167 aa3.01□□□□□ -1.93
VPS53YJL029C FLX1P40464 311 aa3.01□□□□□ -1.93
VPS53YJL029C ERJ5P43613 295 aaPredicted RBP3.01□□□□□ -1.93
VPS53YJL029C YKR005CQ02203 525 aa3.01□□□□□ -1.93
VPS53YJL029C YPL077CQ02831 240 aa3.01□□□□□ -1.93
VPS53YJL029C NEJ1Q06148 342 aa3.01□□□□□ -1.93
VPS53YJL029C PEX30Q06169 523 aa3.01□□□□□ -1.93
VPS53YJL029C MED7Q08278 222 aa3.01□□□□□ -1.93
VPS53YJL029C GCD1P09032 578 aaPredicted RBP3□□□□□ -1.93
VPS53YJL029C SAG1P20840 650 aa3□□□□□ -1.93
VPS53YJL029C YCR101CP25607 182 aa3□□□□□ -1.93
VPS53YJL029C SUA7P29055 345 aaPredicted RBP3□□□□□ -1.93
VPS53YJL029C RCN1P36054 211 aa3□□□□□ -1.93
VPS53YJL029C NVJ1P38881 321 aa3□□□□□ -1.93
VPS53YJL029C BNA2P47125 453 aa3□□□□□ -1.93
VPS53YJL029C UFD1P53044 361 aa3□□□□□ -1.93
VPS53YJL029C YGL159WP53110 370 aa3□□□□□ -1.93
VPS53YJL029C YMR130WQ04223 302 aa3□□□□□ -1.93
VPS53YJL029C PIN3Q06449 215 aa3□□□□□ -1.93
VPS53YJL029C TPO3Q06451 622 aa3□□□□□ -1.93
VPS53YJL029C CCW14O13547 238 aa3□□□□□ -1.93
VPS53YJL029C CDC31P06704 161 aaKnown RBP3□□□□□ -1.93
VPS53YJL029C ENA1P13587 1091 aa3□□□□□ -1.93
VPS53YJL029C CPR2P23285 205 aa3□□□□□ -1.93
VPS53YJL029C RPD3P32561 433 aa3□□□□□ -1.93
VPS53YJL029C ECM4P36156 370 aa3□□□□□ -1.93
VPS53YJL029C CCZ1P38273 704 aa3□□□□□ -1.93
VPS53YJL029C YHC3P47040 408 aa3□□□□□ -1.93
VPS53YJL029C YJL016WP47072 561 aa3□□□□□ -1.93
VPS53YJL029C RBL2P48606 106 aaKnown RBP3□□□□□ -1.93
VPS53YJL029C TAF4P50105 388 aa3□□□□□ -1.93
VPS53YJL029C PMT5P52867 743 aa3□□□□□ -1.93
VPS53YJL029C NSA1P53136 463 aaPredicted RBP3□□□□□ -1.93
VPS53YJL029C SAY1P53324 424 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms