RNA–Protein interactions for RNA: YHR065C

RRP3, Transcript of Protein involved in rRNA processing, yeast

Gene RRP3, Length 1,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP3	YHR065C	YDR102C	Q03864	110 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	NMA1	Q06178	401 aa	Known RBP	4.16	□□□□□ -1.74
RRP3	YHR065C	FRE3	Q08905	711 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	INP53	Q12271	1107 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	ORT1	Q12375	292 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	Q0144	Q9ZZW2	109 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	SPS2	P08459	502 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	ERG9	P29704	444 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	SOF1	P33750	489 aa	Known RBP	4.16	□□□□□ -1.74
RRP3	YHR065C	SSH1	P38353	490 aa	Known RBP	4.16	□□□□□ -1.74
RRP3	YHR065C	ERJ5	P43613	295 aa	Predicted RBP	4.16	□□□□□ -1.74
RRP3	YHR065C	LOH1	P47055	219 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	POP6	P53218	158 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	VHT1	P53241	593 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	SCW4	P53334	386 aa	Known RBP	4.16	□□□□□ -1.74
RRP3	YHR065C	AAH1	P53909	347 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	ASI3	P53983	676 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	KAP120	Q02932	1032 aa		4.16	□□□□□ -1.74
RRP3	YHR065C	HRI1	Q05905	244 aa	Known RBP	4.16	□□□□□ -1.74
RRP3	YHR065C	HTZ1	Q12692	134 aa	Known RBP	4.16	□□□□□ -1.74
RRP3	YHR065C	CHO1	P08456	276 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	PRB1	P09232	635 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	CDC23	P16522	626 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	ACH1	P32316	526 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	MSS1	P32559	526 aa	Predicted RBP	4.15	□□□□□ -1.75
RRP3	YHR065C	PPG1	P32838	368 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	MRPL3	P36516	390 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	MRPL39	P36533	70 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	YHR122W	P38829	231 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	TIR3	P40552	269 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	AIM25	P47140	327 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	HSV2	P50079	448 aa	Predicted RBP	4.15	□□□□□ -1.75
RRP3	YHR065C	YIP4	P53093	235 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	NRK1	P53915	240 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	TIM44	Q01852	431 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	MRPL13	Q02204	264 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	CTF19	Q02732	369 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	DIG2	Q03373	323 aa	Known RBP	4.15	□□□□□ -1.75
RRP3	YHR065C	YDR387C	Q04162	555 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	ASR1	Q06834	288 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	ENV7	Q12003	364 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	YLR125W	Q12138	136 aa		4.15	□□□□□ -1.75
RRP3	YHR065C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
RRP3	YHR065C	PRP8	P33334	2413 aa	Known RBP	4.14	□□□□□ -1.75
RRP3	YHR065C	RPL7A	P05737	244 aa	Known RBP	4.14	□□□□□ -1.75
RRP3	YHR065C	CDC36	P06100	191 aa	Predicted RBP	4.14	□□□□□ -1.75
RRP3	YHR065C	NHP6B	P11633	99 aa	Known RBP	4.14	□□□□□ -1.75
RRP3	YHR065C	PET18	P25362	215 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	CLG1	P35190	452 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	YIL169C	P40442	995 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	CAT5	P41735	233 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	ADO1	P47143	340 aa	Known RBP	4.14	□□□□□ -1.75
RRP3	YHR065C	GPG1	P53130	126 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	MTL1	P53214	551 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	RSM23	Q01163	450 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	UTP15	Q04305	513 aa	Known RBP	4.14	□□□□□ -1.75
RRP3	YHR065C	GAS2	Q06135	555 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	SRL2	Q12020	392 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	RPL7B	Q12213	244 aa	Known RBP	4.14	□□□□□ -1.75
RRP3	YHR065C	YDL180W	Q12301	547 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	YRM1	Q12340	786 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	YPR071W	Q12346	211 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	FSH3	Q99369	266 aa		4.14	□□□□□ -1.75
RRP3	YHR065C	RPL6B	P05739	176 aa	Known RBP	4.13	□□□□□ -1.75
RRP3	YHR065C	MET3	P08536	511 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	RPS16A	P0CX51	143 aa	Known RBP	4.13	□□□□□ -1.75
RRP3	YHR065C	RPS16B	P0CX52	143 aa	Known RBP	4.13	□□□□□ -1.75
RRP3	YHR065C	ADH7	P25377	361 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	ATG22	P25568	528 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	DBF20	P32328	564 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	PPQ1	P32945	549 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	YEL057C	P39983	233 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	AVT7	P40501	490 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	BUD8	P41698	603 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	CTK2	P46962	323 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	UBX6	P47049	396 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	GPI14	P47088	403 aa	Known RBP	4.13	□□□□□ -1.75
RRP3	YHR065C	NIT3	P49954	291 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	DIE2	P50076	525 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	RPN14	P53196	417 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	FMP48	P53233	369 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	GIM3	P53900	129 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	HHT1	P61830	136 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	HNT1	Q04344	158 aa	Known RBP	4.13	□□□□□ -1.75
RRP3	YHR065C	COQ11	Q05892	277 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	HEM25	Q07534	307 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	TRM13	Q12383	476 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	ISA2	Q12425	185 aa		4.13	□□□□□ -1.75
RRP3	YHR065C	COX5B	P00425	151 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	MES1	P00958	751 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	URA3	P03962	267 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	RAD52	P06778	471 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	RPL3	P14126	387 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	STF2	P16965	84 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	SAR1	P20606	190 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	HXT2	P23585	541 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	RNA14	P25298	677 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	AFG1	P32317	509 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	RNP1	P32385	249 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	PPZ2	P33329	710 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms