RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C TY3A-GQ12173 290 aa2.93□□□□□ -1.94
SCL1YGL011C MED4Q12343 284 aa2.93□□□□□ -1.94
SCL1YGL011C TY3A-IQ99219 290 aa2.93□□□□□ -1.94
SCL1YGL011C SWI1P09547 1314 aa2.93□□□□□ -1.94
SCL1YGL011C SPT8P38915 602 aa2.92□□□□□ -1.94
SCL1YGL011C CAB4P53332 305 aa2.92□□□□□ -1.94
SCL1YGL011C RDS3Q06835 107 aaPredicted RBP2.92□□□□□ -1.94
SCL1YGL011C PAM18Q07914 168 aa2.92□□□□□ -1.94
SCL1YGL011C RRP40Q08285 240 aaKnown RBP2.92□□□□□ -1.94
SCL1YGL011C DPM1P14020 267 aaKnown RBP2.91□□□□□ -1.94
SCL1YGL011C SEC22P22214 214 aa2.91□□□□□ -1.94
SCL1YGL011C MRH4P53166 561 aa2.91□□□□□ -1.94
SCL1YGL011C SNZ2P53824 298 aa2.91□□□□□ -1.94
SCL1YGL011C RHO3Q00245 231 aaKnown RBP2.91□□□□□ -1.94
SCL1YGL011C PET117Q02771 107 aa2.91□□□□□ -1.94
SCL1YGL011C SRL4Q03085 281 aa2.91□□□□□ -1.94
SCL1YGL011C GRH1Q04410 372 aaKnown RBP2.91□□□□□ -1.94
SCL1YGL011C SPG4Q04438 115 aa2.91□□□□□ -1.94
SCL1YGL011C YCT1Q12235 531 aa2.91□□□□□ -1.94
SCL1YGL011C FKS1P38631 1876 aaKnown RBP2.9□□□□□ -1.94
SCL1YGL011C CFT1Q06632 1357 aaKnown RBP2.9□□□□□ -1.94
SCL1YGL011C SGE1P33335 543 aa2.9□□□□□ -1.95
SCL1YGL011C DRE2P36152 348 aa2.9□□□□□ -1.95
SCL1YGL011C YJR146WP47174 117 aa2.9□□□□□ -1.95
SCL1YGL011C GOT1Q03554 138 aa2.9□□□□□ -1.95
SCL1YGL011C YDR124WQ04608 324 aa2.9□□□□□ -1.95
SCL1YGL011C RRS1Q08746 203 aaKnown RBP2.9□□□□□ -1.95
SCL1YGL011C RPL26AP05743 127 aaKnown RBP2.89□□□□□ -1.95
SCL1YGL011C FZO1P38297 855 aa2.89□□□□□ -1.95
SCL1YGL011C BFR1P38934 470 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95 RIP-Chip
SCL1YGL011C HOC1P47124 396 aa2.89□□□□□ -1.95
SCL1YGL011C YJR079WP47126 109 aa2.89□□□□□ -1.95
SCL1YGL011C RPL26BP53221 127 aaKnown RBP2.89□□□□□ -1.95
SCL1YGL011C RSM10Q03201 203 aa2.89□□□□□ -1.95
SCL1YGL011C SYC1Q08553 188 aaPredicted RBP2.89□□□□□ -1.95
SCL1YGL011C EMP46Q12396 444 aa2.89□□□□□ -1.95
SCL1YGL011C SGA1P08019 549 aa2.88□□□□□ -1.95
SCL1YGL011C SSH1P38353 490 aaKnown RBP2.88□□□□□ -1.95
SCL1YGL011C THO1P40040 218 aaKnown RBP2.88□□□□□ -1.95
SCL1YGL011C FMC1P40491 155 aa2.88□□□□□ -1.95
SCL1YGL011C MRPL50P53724 139 aa2.88□□□□□ -1.95
SCL1YGL011C MYO5Q04439 1219 aaKnown RBP2.88□□□□□ -1.95
SCL1YGL011C CDD1Q06549 142 aa2.88□□□□□ -1.95
SCL1YGL011C MRPL39P36533 70 aa2.87□□□□□ -1.95
SCL1YGL011C LDB7P38210 180 aa2.87□□□□□ -1.95
SCL1YGL011C YHB1P39676 399 aaKnown RBP2.87□□□□□ -1.95
SCL1YGL011C COG3P40094 801 aa2.87□□□□□ -1.95
SCL1YGL011C RGM1Q00453 211 aa2.87□□□□□ -1.95
SCL1YGL011C VPS68Q12016 184 aa2.87□□□□□ -1.95
SCL1YGL011C BBP1Q12365 385 aa2.87□□□□□ -1.95
SCL1YGL011C SNU23Q12368 194 aaPredicted RBP2.87□□□□□ -1.95
SCL1YGL011C MSN4P33749 630 aa2.86□□□□□ -1.95
SCL1YGL011C YJL016WP47072 561 aa2.86□□□□□ -1.95
SCL1YGL011C DSK2P48510 373 aa2.86□□□□□ -1.95
SCL1YGL011C YOR186WQ08560 144 aa2.86□□□□□ -1.95
SCL1YGL011C YCR016WP25617 290 aaKnown RBP2.85□□□□□ -1.95
SCL1YGL011C YGP1P38616 354 aaKnown RBP2.85□□□□□ -1.95
SCL1YGL011C YHR127WP38833 243 aaKnown RBP2.85□□□□□ -1.95
SCL1YGL011C NUP84P52891 726 aa2.85□□□□□ -1.95
SCL1YGL011C PEX12Q04370 399 aa2.85□□□□□ -1.95
SCL1YGL011C SUE1Q06524 206 aa2.85□□□□□ -1.95
SCL1YGL011C MATALPHA1P0CY06 175 aa2.84□□□□□ -1.95
SCL1YGL011C HMLALPHA1P0CY07 175 aa2.84□□□□□ -1.95
SCL1YGL011C CLB6P32943 380 aa2.84□□□□□ -1.95
SCL1YGL011C RCN1P36054 211 aa2.84□□□□□ -1.95
SCL1YGL011C MSA2P36157 363 aa2.84□□□□□ -1.95
SCL1YGL011C YER189WP40104 122 aa2.84□□□□□ -1.95
SCL1YGL011C TIF34P40217 347 aaKnown RBP2.84□□□□□ -1.95
SCL1YGL011C SLM2P53955 656 aa2.84□□□□□ -1.95
SCL1YGL011C YNL046WP53956 172 aa2.84□□□□□ -1.95
SCL1YGL011C KRE28Q04431 385 aa2.84□□□□□ -1.95
SCL1YGL011C SPO77Q06134 477 aa2.84□□□□□ -1.95
SCL1YGL011C RPO26P20435 155 aa2.83□□□□□ -1.96
SCL1YGL011C YCR102CP25608 368 aa2.83□□□□□ -1.96
SCL1YGL011C YKL075CP36083 450 aa2.83□□□□□ -1.96
SCL1YGL011C OST2P46964 130 aa2.83□□□□□ -1.96
SCL1YGL011C LIA1P47120 325 aaKnown RBP2.83□□□□□ -1.96
SCL1YGL011C SEI1Q06058 285 aa2.83□□□□□ -1.96
SCL1YGL011C YLR126CQ12288 251 aa2.83□□□□□ -1.96
SCL1YGL011C SAS5Q99314 248 aa2.83□□□□□ -1.96
SCL1YGL011C RPS5P26783 225 aaKnown RBP2.82□□□□□ -1.96
SCL1YGL011C YGL159WP53110 370 aa2.82□□□□□ -1.96
SCL1YGL011C YLR030WQ07967 263 aa2.82□□□□□ -1.96
SCL1YGL011C YPL229WQ99395 206 aa2.82□□□□□ -1.96
SCL1YGL011C SRB4P32569 687 aa2.81□□□□□ -1.96
SCL1YGL011C YLR283WQ05867 314 aa2.81□□□□□ -1.96
SCL1YGL011C YLR462WO13556 202 aa2.8□□□□□ -1.96
SCL1YGL011C SNF6P18888 332 aa2.8□□□□□ -1.96
SCL1YGL011C MRPL25P23369 157 aa2.8□□□□□ -1.96
SCL1YGL011C ERG24P32462 438 aaKnown RBP2.8□□□□□ -1.96
SCL1YGL011C YHL026CP38740 315 aa2.8□□□□□ -1.96
SCL1YGL011C YEL075CP39972 122 aa2.8□□□□□ -1.96
SCL1YGL011C MSA1Q08471 629 aa2.8□□□□□ -1.96
SCL1YGL011C COS8P38723 381 aa2.79□□□□□ -1.96
SCL1YGL011C YER085CP40058 173 aa2.79□□□□□ -1.96
SCL1YGL011C MRPL49P40858 161 aaPredicted RBP2.79□□□□□ -1.96
SCL1YGL011C SMD3P43321 101 aaKnown RBP2.79□□□□□ -1.96
SCL1YGL011C COS6P53344 381 aa2.79□□□□□ -1.96
SCL1YGL011C NOP13P53883 403 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SCL1YGL011C YPR172WQ06608 200 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms