RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C OXA1P39952 402 aa5.53□□□□□ -1.52
SHO1YER118C PDS1P40316 373 aaPredicted RBP5.53□□□□□ -1.52
SHO1YER118C PSA1P41940 361 aaKnown RBP5.53□□□□□ -1.52
SHO1YER118C SNO3P43544 222 aa5.53□□□□□ -1.52
SHO1YER118C COG7P53195 279 aa5.53□□□□□ -1.52
SHO1YER118C DYN3Q04949 312 aa5.53□□□□□ -1.52
SHO1YER118C LIP2Q06005 328 aa5.53□□□□□ -1.52
SHO1YER118C IGO2Q9P305 131 aa5.53□□□□□ -1.52
SHO1YER118C SIN3P22579 1536 aa5.53□□□□□ -1.52
SHO1YER118C YMR316C-AI2HB70 103 aa5.52□□□□□ -1.53
SHO1YER118C STE7P06784 515 aa5.52□□□□□ -1.53
SHO1YER118C SEC22P22214 214 aa5.52□□□□□ -1.53
SHO1YER118C RNQ1P25367 405 aa5.52□□□□□ -1.53
SHO1YER118C ARO7P32178 256 aa5.52□□□□□ -1.53
SHO1YER118C NAT2P37293 288 aa5.52□□□□□ -1.53
SHO1YER118C SHE3P38272 425 aaKnown RBP5.52□□□□□ -1.53
SHO1YER118C YHL049CP38722 271 aa5.52□□□□□ -1.53
SHO1YER118C CHS7P38843 316 aa5.52□□□□□ -1.53
SHO1YER118C YMR254CQ04838 102 aa5.52□□□□□ -1.53
SHO1YER118C YLR031WQ07978 186 aa5.52□□□□□ -1.53
SHO1YER118C MIM1Q08176 113 aa5.52□□□□□ -1.53
SHO1YER118C OSW1Q08692 278 aa5.52□□□□□ -1.53
SHO1YER118C RPN8Q08723 338 aaKnown RBP5.52□□□□□ -1.53
SHO1YER118C COS2P0CX12 379 aa5.51□□□□□ -1.53
SHO1YER118C COS3P0CX13 379 aa5.51□□□□□ -1.53
SHO1YER118C URA10P30402 227 aa5.51□□□□□ -1.53
SHO1YER118C TRS65P32893 560 aa5.51□□□□□ -1.53
SHO1YER118C FLO5P38894 1075 aa5.51□□□□□ -1.53
SHO1YER118C YIL024CP40543 189 aa5.51□□□□□ -1.53
SHO1YER118C FMP32P43557 207 aa5.51□□□□□ -1.53
SHO1YER118C YHC1Q05900 231 aaKnown RBP5.51□□□□□ -1.53
SHO1YER118C YLR030WQ07967 263 aa5.51□□□□□ -1.53
SHO1YER118C YOL019WQ08157 551 aa5.51□□□□□ -1.53
SHO1YER118C ATP16Q12165 160 aa5.51□□□□□ -1.53
SHO1YER118C EFG1Q3E705 233 aaKnown RBP5.51□□□□□ -1.53
SHO1YER118C YPL229WQ99395 206 aa5.51□□□□□ -1.53
SHO1YER118C CYC3P06182 269 aa5.5□□□□□ -1.53
SHO1YER118C ATR1P13090 542 aa5.5□□□□□ -1.53
SHO1YER118C RNA14P25298 677 aaKnown RBP5.5□□□□□ -1.53
SHO1YER118C CAM1P29547 415 aaKnown RBP5.5□□□□□ -1.53
SHO1YER118C PMU1P36069 295 aa5.5□□□□□ -1.53
SHO1YER118C ECM14P38836 430 aa5.5□□□□□ -1.53
SHO1YER118C PCI8P40512 444 aa5.5□□□□□ -1.53
SHO1YER118C SCS3P53012 380 aa5.5□□□□□ -1.53
SHO1YER118C SHY1P53266 389 aa5.5□□□□□ -1.53
SHO1YER118C THP3Q12049 470 aaKnown RBP5.5□□□□□ -1.53
SHO1YER118C ATX2Q12067 313 aa5.5□□□□□ -1.53
SHO1YER118C CRC1Q12289 327 aa5.5□□□□□ -1.53
SHO1YER118C HMS1Q12398 434 aa5.5□□□□□ -1.53
SHO1YER118C ERD2P18414 219 aa5.49□□□□□ -1.53
SHO1YER118C IDP1P21954 428 aaKnown RBP5.49□□□□□ -1.53
SHO1YER118C LSM4P40070 187 aaKnown RBP5.49□□□□□ -1.53
SHO1YER118C HAC1P41546 238 aa5.49□□□□□ -1.53
SHO1YER118C DIM1P41819 318 aaKnown RBP5.49□□□□□ -1.53
SHO1YER118C MPA43P53583 542 aaPredicted RBP5.49□□□□□ -1.53
SHO1YER118C RCF2P53721 224 aa5.49□□□□□ -1.53
SHO1YER118C YNL046WP53956 172 aa5.49□□□□□ -1.53
SHO1YER118C MAK3Q03503 176 aa5.49□□□□□ -1.53
SHO1YER118C AIM34Q03673 198 aa5.49□□□□□ -1.53
SHO1YER118C RFU1Q08003 200 aa5.49□□□□□ -1.53
SHO1YER118C YOR292CQ08743 309 aa5.49□□□□□ -1.53
SHO1YER118C YDL085C-AQ3E7B7 68 aaKnown RBP5.49□□□□□ -1.53
SHO1YER118C DRS2P39524 1355 aa5.49□□□□□ -1.53
SHO1YER118C CMD1P06787 147 aaKnown RBP5.48□□□□□ -1.53
SHO1YER118C YCR023CP25351 611 aa5.48□□□□□ -1.53
SHO1YER118C APS1P35181 156 aa5.48□□□□□ -1.53
SHO1YER118C MTC4P38335 694 aaKnown RBP5.48□□□□□ -1.53
SHO1YER118C SSH1P38353 490 aaKnown RBP5.48□□□□□ -1.53
SHO1YER118C LSM12P38828 187 aaKnown RBP5.48□□□□□ -1.53
SHO1YER118C NVJ1P38881 321 aa5.48□□□□□ -1.53
SHO1YER118C SEN34P39707 275 aa5.48□□□□□ -1.53
SHO1YER118C PEX17P40155 199 aa5.48□□□□□ -1.53
SHO1YER118C AVT7P40501 490 aa5.48□□□□□ -1.53
SHO1YER118C MRH4P53166 561 aa5.48□□□□□ -1.53
SHO1YER118C CRZ1P53968 678 aa5.48□□□□□ -1.53
SHO1YER118C PET191Q02772 108 aa5.48□□□□□ -1.53
SHO1YER118C HNT1Q04344 158 aaKnown RBP5.48□□□□□ -1.53
SHO1YER118C FSH2Q05015 223 aa5.48□□□□□ -1.53
SHO1YER118C PEX11Q12462 236 aa5.48□□□□□ -1.53
SHO1YER118C TAF2P23255 1407 aa5.48□□□□□ -1.53
SHO1YER118C THO2P53552 1597 aaKnown RBP5.47□□□□□ -1.53
SHO1YER118C SSK2P53599 1579 aa5.47□□□□□ -1.53
SHO1YER118C SEC4P07560 215 aaKnown RBP5.47□□□□□ -1.53
SHO1YER118C DSF1P0CX08 502 aa5.47□□□□□ -1.53
SHO1YER118C YNR073CP0CX09 502 aa5.47□□□□□ -1.53
SHO1YER118C MDM10P18409 493 aa5.47□□□□□ -1.53
SHO1YER118C MCK1P21965 375 aaKnown RBP5.47□□□□□ -1.53
SHO1YER118C FAR7P43592 221 aa5.47□□□□□ -1.53
SHO1YER118C YJR111CP47148 283 aaKnown RBP5.47□□□□□ -1.53
SHO1YER118C UBC12P52491 188 aa5.47□□□□□ -1.53
SHO1YER118C YNL184CP53876 108 aa5.47□□□□□ -1.53
SHO1YER118C HCR1Q05775 265 aaKnown RBP5.47□□□□□ -1.53
SHO1YER118C YOR186WQ08560 144 aa5.47□□□□□ -1.53
SHO1YER118C BBP1Q12365 385 aa5.47□□□□□ -1.53
SHO1YER118C RAX2Q12465 1220 aa5.47□□□□□ -1.53
SHO1YER118C BUD4P47136 1447 aa5.47□□□□□ -1.53
SHO1YER118C YOR1P53049 1477 aa5.46□□□□□ -1.53
SHO1YER118C TRP1P00912 224 aa5.46□□□□□ -1.54
SHO1YER118C HHF1P02309 103 aaKnown RBP5.46□□□□□ -1.54
SHO1YER118C BUB2P26448 306 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms