RNA–Protein interactions for RNA: YER089C

PTC2, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC2, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC2	YER089C	CTK2	P46962	323 aa		11.73	□□□□□ -0.53
PTC2	YER089C	ADO1	P47143	340 aa	Known RBP	11.73	□□□□□ -0.53
PTC2	YER089C	RSM23	Q01163	450 aa		11.73	□□□□□ -0.53
PTC2	YER089C	PRM4	Q12498	284 aa		11.73	□□□□□ -0.53
PTC2	YER089C	FMT1	P32785	401 aa		11.72	□□□□□ -0.53
PTC2	YER089C	PAN3	P36102	679 aa	Predicted RBP	11.72	□□□□□ -0.53
PTC2	YER089C	YBR096W	P38256	230 aa		11.72	□□□□□ -0.53
PTC2	YER089C	IKS1	P47042	667 aa		11.72	□□□□□ -0.53
PTC2	YER089C	YGL159W	P53110	370 aa		11.72	□□□□□ -0.53
PTC2	YER089C	HHT1	P61830	136 aa		11.72	□□□□□ -0.53
PTC2	YER089C	RSM10	Q03201	203 aa		11.72	□□□□□ -0.53
PTC2	YER089C	YDR387C	Q04162	555 aa		11.72	□□□□□ -0.53
PTC2	YER089C	ATG31	Q12421	196 aa		11.72	□□□□□ -0.53
PTC2	YER089C	YGL194C-A	Q2V2P6	80 aa		11.72	□□□□□ -0.53
PTC2	YER089C	PET20	Q99373	253 aa		11.72	□□□□□ -0.53
PTC2	YER089C	RPS16A	P0CX51	143 aa	Known RBP	11.71	□□□□□ -0.53
PTC2	YER089C	RPS16B	P0CX52	143 aa	Known RBP	11.71	□□□□□ -0.53
PTC2	YER089C	SED4	P25365	1065 aa		11.71	□□□□□ -0.53
PTC2	YER089C	RFA3	P26755	122 aa	Known RBP	11.71	□□□□□ -0.53
PTC2	YER089C	ARO9	P38840	513 aa	Predicted RBP	11.71	□□□□□ -0.53
PTC2	YER089C	QDR1	P40475	563 aa		11.71	□□□□□ -0.53
PTC2	YER089C	SEC16	P48415	2195 aa	Known RBP	11.7	□□□□□ -0.54
PTC2	YER089C	PTI1	P39927	425 aa	Predicted RBP	11.7	□□□□□ -0.54
PTC2	YER089C	YIL169C	P40442	995 aa		11.7	□□□□□ -0.54
PTC2	YER089C	ACS2	P52910	683 aa	Known RBP	11.7	□□□□□ -0.54
PTC2	YER089C	OKP1	P53298	406 aa		11.7	□□□□□ -0.54
PTC2	YER089C	SYM1	Q06563	197 aa		11.7	□□□□□ -0.54
PTC2	YER089C	Q0144	Q9ZZW2	109 aa		11.7	□□□□□ -0.54
PTC2	YER089C	CBP6	P07253	162 aa	Predicted RBP	11.69	□□□□□ -0.54
PTC2	YER089C	YCR061W	P25639	631 aa		11.69	□□□□□ -0.54
PTC2	YER089C	MRT4	P33201	236 aa	Known RBP	11.69	□□□□□ -0.54
PTC2	YER089C	YJL016W	P47072	561 aa		11.69	□□□□□ -0.54
PTC2	YER089C	JAC1	P53193	184 aa		11.69	□□□□□ -0.54
PTC2	YER089C	YML018C	Q03730	393 aa		11.69	□□□□□ -0.54
PTC2	YER089C	ERP4	Q12450	207 aa		11.69	□□□□□ -0.54
PTC2	YER089C	AAC1	P04710	309 aa		11.68	□□□□□ -0.54
PTC2	YER089C	SEN2	P16658	377 aa		11.68	□□□□□ -0.54
PTC2	YER089C	SUA5	P32579	426 aa		11.68	□□□□□ -0.54
PTC2	YER089C	YBL010C	P32788	280 aa		11.68	□□□□□ -0.54
PTC2	YER089C	VAM7	P32912	316 aa		11.68	□□□□□ -0.54
PTC2	YER089C	MGE1	P38523	228 aa		11.68	□□□□□ -0.54
PTC2	YER089C	AVT4	P50944	713 aa		11.68	□□□□□ -0.54
PTC2	YER089C	SOK2	P53438	785 aa	Predicted RBP	11.68	□□□□□ -0.54
PTC2	YER089C	YNR048W	P53740	393 aa		11.68	□□□□□ -0.54
PTC2	YER089C	MRPL19	P53875	158 aa		11.68	□□□□□ -0.54
PTC2	YER089C	DID2	P69771	204 aa		11.68	□□□□□ -0.54
PTC2	YER089C	MRP51	Q02950	344 aa		11.68	□□□□□ -0.54
PTC2	YER089C	FEX1	Q08913	375 aa		11.68	□□□□□ -0.54
PTC2	YER089C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	11.67	□□□□□ -0.54	not detected
PTC2	YER089C	RPL30	P14120	105 aa	Known RBP	11.67	□□□□□ -0.54
PTC2	YER089C	SEC62	P21825	274 aa		11.67	□□□□□ -0.54
PTC2	YER089C	MAG1	P22134	296 aa	Known RBP	11.67	□□□□□ -0.54
PTC2	YER089C	RFA1	P22336	621 aa	Known RBP	11.67	□□□□□ -0.54
PTC2	YER089C	IFM1	P25038	676 aa		11.67	□□□□□ -0.54
PTC2	YER089C	TRR1	P29509	319 aa	Known RBP	11.67	□□□□□ -0.54
PTC2	YER089C	YPC1	P38298	316 aa		11.67	□□□□□ -0.54
PTC2	YER089C	SKP1	P52286	194 aa		11.67	□□□□□ -0.54
PTC2	YER089C	NSA1	P53136	463 aa	Predicted RBP	11.67	□□□□□ -0.54
PTC2	YER089C	COQ11	Q05892	277 aa		11.67	□□□□□ -0.54
PTC2	YER089C	MRX9	Q07349	420 aa	Known RBP	11.67	□□□□□ -0.54
PTC2	YER089C	TFB5	Q3E7C1	72 aa	Predicted RBP	11.67	□□□□□ -0.54
PTC2	YER089C	ATF1	P40353	525 aa		11.67	□□□□□ -0.54
PTC2	YER089C	SCY1	P53009	804 aa		11.67	□□□□□ -0.54
PTC2	YER089C	NIF3	P53081	288 aa		11.67	□□□□□ -0.54
PTC2	YER089C	DLT1	Q04216	342 aa		11.67	□□□□□ -0.54
PTC2	YER089C	DBP2	P24783	546 aa	Known RBP	11.66	□□□□□ -0.54
PTC2	YER089C	ERG3	P32353	365 aa		11.66	□□□□□ -0.54
PTC2	YER089C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	11.66	□□□□□ -0.54	not detected
PTC2	YER089C	YMR144W	P40214	342 aa	Known RBP	11.66	□□□□□ -0.54
PTC2	YER089C	MOB2	P43563	287 aa		11.66	□□□□□ -0.54
PTC2	YER089C	TNA1	P53322	534 aa		11.66	□□□□□ -0.54
PTC2	YER089C	YDR248C	Q03786	193 aa		11.66	□□□□□ -0.54
PTC2	YER089C	THI72	Q08579	599 aa		11.66	□□□□□ -0.54
PTC2	YER089C	USB1	Q12208	290 aa	Known RBP	11.66	□□□□□ -0.54
PTC2	YER089C	MCM1	P11746	286 aa		11.65	□□□□□ -0.55
PTC2	YER089C	MRPL36	P36531	177 aa		11.65	□□□□□ -0.55
PTC2	YER089C	MRPL39	P36533	70 aa		11.65	□□□□□ -0.55
PTC2	YER089C	POP8	P38208	133 aa		11.65	□□□□□ -0.55
PTC2	YER089C	GNA1	P43577	159 aa	Predicted RBP	11.65	□□□□□ -0.55
PTC2	YER089C	HRI1	Q05905	244 aa	Known RBP	11.65	□□□□□ -0.55
PTC2	YER089C	AEP3	Q12089	606 aa		11.65	□□□□□ -0.55
PTC2	YER089C	YDL180W	Q12301	547 aa		11.65	□□□□□ -0.55
PTC2	YER089C	RPS31	P05759	152 aa	Known RBP	11.64	□□□□□ -0.55
PTC2	YER089C	RPB10	P22139	70 aa		11.64	□□□□□ -0.55
PTC2	YER089C	MRP20	P32387	263 aa		11.64	□□□□□ -0.55
PTC2	YER089C	AGA2	P32781	87 aa		11.64	□□□□□ -0.55
PTC2	YER089C	YND1	P40009	630 aa		11.64	□□□□□ -0.55
PTC2	YER089C	SEC24	P40482	926 aa	Known RBP	11.64	□□□□□ -0.55
PTC2	YER089C	SPR28	Q04921	423 aa		11.64	□□□□□ -0.55
PTC2	YER089C	SCP1	Q08873	200 aa		11.64	□□□□□ -0.55
PTC2	YER089C	IZH2	Q12442	317 aa		11.64	□□□□□ -0.55
PTC2	YER089C	YBR085C-A	O43137	85 aa		11.63	□□□□□ -0.55
PTC2	YER089C	CDC28	P00546	298 aa	Known RBP	11.63	□□□□□ -0.55
PTC2	YER089C	BMT5	P40493	336 aa		11.63	□□□□□ -0.55
PTC2	YER089C	TAD2	P47058	250 aa		11.63	□□□□□ -0.55
PTC2	YER089C	UBC12	P52491	188 aa		11.63	□□□□□ -0.55
PTC2	YER089C	YAP6	Q03935	383 aa		11.63	□□□□□ -0.55
PTC2	YER089C	IRA1	P18963	3092 aa		11.62	□□□□□ -0.55
PTC2	YER089C	RPL40A	P0CH08	128 aa	Known RBP	11.62	□□□□□ -0.55
PTC2	YER089C	RPL40B	P0CH09	128 aa	Known RBP	11.62	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms