RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W NRG2P38082 220 aa1.78□□□□□ -2.12
RSM28YDR494W GRE3P38715 327 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
RSM28YDR494W MEP1P40260 492 aa1.78□□□□□ -2.12
RSM28YDR494W OST2P46964 130 aa1.78□□□□□ -2.12
RSM28YDR494W RSM10Q03201 203 aa1.78□□□□□ -2.12
RSM28YDR494W YDR124WQ04608 324 aa1.78□□□□□ -2.12
RSM28YDR494W BBP1Q12365 385 aa1.78□□□□□ -2.12
RSM28YDR494W SEC22P22214 214 aa1.77□□□□□ -2.13
RSM28YDR494W YOR062CP36025 268 aa1.77□□□□□ -2.13
RSM28YDR494W PRS4P38063 326 aaPredicted RBP1.77□□□□□ -2.13
RSM28YDR494W SNZ3P43545 298 aa1.77□□□□□ -2.13
RSM28YDR494W YGL034CP53186 121 aa1.77□□□□□ -2.13
RSM28YDR494W ASI3P53983 676 aa1.77□□□□□ -2.13
RSM28YDR494W GOT1Q03554 138 aa1.77□□□□□ -2.13
RSM28YDR494W YOL107WQ12239 342 aa1.77□□□□□ -2.13
RSM28YDR494W EMP46Q12396 444 aa1.77□□□□□ -2.13
RSM28YDR494W SWI1P09547 1314 aa1.76□□□□□ -2.13
RSM28YDR494W YKR104WP0CE69 306 aa1.76□□□□□ -2.13
RSM28YDR494W YCR102CP25608 368 aa1.76□□□□□ -2.13
RSM28YDR494W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
RSM28YDR494W BIG1P38813 335 aa1.76□□□□□ -2.13
RSM28YDR494W SMB1P40018 196 aaKnown RBP1.76□□□□□ -2.13
RSM28YDR494W SNX4P47057 423 aa1.76□□□□□ -2.13
RSM28YDR494W MRH4P53166 561 aa1.76□□□□□ -2.13
RSM28YDR494W YPR098CQ06089 161 aa1.76□□□□□ -2.13
RSM28YDR494W KAP95Q06142 861 aaKnown RBP1.76□□□□□ -2.13
RSM28YDR494W COQ10Q08058 207 aa1.76□□□□□ -2.13
RSM28YDR494W RRP36Q12481 300 aaPredicted RBP1.76□□□□□ -2.13
RSM28YDR494W MHT1Q12525 324 aa1.76□□□□□ -2.13
RSM28YDR494W YHR086W-AQ3E746 53 aa1.76□□□□□ -2.13
RSM28YDR494W MSF1P08425 469 aa1.75□□□□□ -2.13
RSM28YDR494W CCA1P21269 546 aa1.75□□□□□ -2.13
RSM28YDR494W RNA15P25299 296 aaPredicted RBP1.75□□□□□ -2.13
RSM28YDR494W SGE1P33335 543 aa1.75□□□□□ -2.13
RSM28YDR494W MRPL39P36533 70 aa1.75□□□□□ -2.13
RSM28YDR494W MRX3P38172 270 aa1.75□□□□□ -2.13
RSM28YDR494W COS8P38723 381 aa1.75□□□□□ -2.13
RSM28YDR494W YER189WP40104 122 aa1.75□□□□□ -2.13
RSM28YDR494W YJL027CP47063 138 aaPredicted RBP1.75□□□□□ -2.13
RSM28YDR494W DCR2Q05924 578 aa1.75□□□□□ -2.13
RSM28YDR494W SDO1Q07953 250 aaKnown RBP1.75□□□□□ -2.13
RSM28YDR494W RRP40Q08285 240 aaKnown RBP1.75□□□□□ -2.13
RSM28YDR494W SYC1Q08553 188 aaPredicted RBP1.75□□□□□ -2.13
RSM28YDR494W BEM2P39960 2167 aaKnown RBP1.75□□□□□ -2.13
RSM28YDR494W PUT1P09368 476 aa1.74□□□□□ -2.13
RSM28YDR494W EHD3P28817 500 aa1.74□□□□□ -2.13
RSM28YDR494W HOM6P31116 359 aaKnown RBP1.74□□□□□ -2.13
RSM28YDR494W FZO1P38297 855 aa1.74□□□□□ -2.13
RSM28YDR494W YHB1P39676 399 aaKnown RBP1.74□□□□□ -2.13
RSM28YDR494W ARC15P40518 154 aaRIP-Chip data1.74□□□□□ -2.13not detected
RSM28YDR494W USE1P53146 245 aa1.74□□□□□ -2.13
RSM28YDR494W SNZ2P53824 298 aa1.74□□□□□ -2.13
RSM28YDR494W CTF19Q02732 369 aa1.74□□□□□ -2.13
RSM28YDR494W SPG4Q04438 115 aa1.74□□□□□ -2.13
RSM28YDR494W RRS1Q08746 203 aaKnown RBP1.74□□□□□ -2.13
RSM28YDR494W YLR462WO13556 202 aa1.73□□□□□ -2.13
RSM28YDR494W RSR1P13856 272 aa1.73□□□□□ -2.13
RSM28YDR494W DOA4P32571 926 aa1.73□□□□□ -2.13
RSM28YDR494W GOS1P38736 223 aa1.73□□□□□ -2.13
RSM28YDR494W YEL075CP39972 122 aa1.73□□□□□ -2.13
RSM28YDR494W FCY21P40039 528 aa1.73□□□□□ -2.13
RSM28YDR494W GLG2P47011 380 aa1.73□□□□□ -2.13
RSM28YDR494W YHR032W-AP0C5N6 59 aa1.72□□□□□ -2.13
RSM28YDR494W YUH1P35127 236 aa1.72□□□□□ -2.13
RSM28YDR494W MSA2P36157 363 aa1.72□□□□□ -2.13
RSM28YDR494W YBR096WP38256 230 aa1.72□□□□□ -2.13
RSM28YDR494W THO1P40040 218 aaKnown RBP1.72□□□□□ -2.13
RSM28YDR494W BAT2P47176 376 aaKnown RBP1.72□□□□□ -2.13
RSM28YDR494W RHO3Q00245 231 aaKnown RBP1.72□□□□□ -2.13
RSM28YDR494W SNU23Q12368 194 aaPredicted RBP1.72□□□□□ -2.13
RSM28YDR494W Q0255P03881 472 aa1.71□□□□□ -2.14
RSM28YDR494W ERG24P32462 438 aaKnown RBP1.71□□□□□ -2.14
RSM28YDR494W YHR125WP38831 101 aa1.71□□□□□ -2.14
RSM28YDR494W YGL159WP53110 370 aa1.71□□□□□ -2.14
RSM28YDR494W PRM15Q03262 622 aa1.71□□□□□ -2.14
RSM28YDR494W FAR8Q05040 523 aa1.71□□□□□ -2.14
RSM28YDR494W RRT8Q08219 342 aa1.71□□□□□ -2.14
RSM28YDR494W YOR186WQ08560 144 aa1.71□□□□□ -2.14
RSM28YDR494W CSM4Q08955 156 aa1.71□□□□□ -2.14
RSM28YDR494W YCT1Q12235 531 aa1.71□□□□□ -2.14
RSM28YDR494W YOR029WQ12243 111 aa1.71□□□□□ -2.14
RSM28YDR494W BFR1P38934 470 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
RSM28YDR494W BNA6P43619 295 aa1.7□□□□□ -2.14
RSM28YDR494W YGR026WP53217 278 aa1.7□□□□□ -2.14
RSM28YDR494W YMR279CQ03263 540 aa1.7□□□□□ -2.14
RSM28YDR494W YLR030WQ07967 263 aa1.7□□□□□ -2.14
RSM28YDR494W MSH5Q12175 901 aa1.7□□□□□ -2.14
RSM28YDR494W ADH3P07246 375 aaKnown RBP1.69□□□□□ -2.14
RSM28YDR494W RPT5P33297 434 aaKnown RBP1.69□□□□□ -2.14
RSM28YDR494W YHR127WP38833 243 aaKnown RBP1.69□□□□□ -2.14
RSM28YDR494W SMD3P43321 101 aaKnown RBP1.69□□□□□ -2.14
RSM28YDR494W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
RSM28YDR494W AKR2Q12013 749 aa1.69□□□□□ -2.14
RSM28YDR494W IPP1P00817 287 aaKnown RBP1.68□□□□□ -2.14
RSM28YDR494W VMA11P32842 164 aa1.68□□□□□ -2.14
RSM28YDR494W RMR1P53060 241 aa1.68□□□□□ -2.14
RSM28YDR494W GTR2P53290 341 aa1.68□□□□□ -2.14
RSM28YDR494W MRPL50P53724 139 aa1.68□□□□□ -2.14
RSM28YDR494W YNL134CP53912 376 aaKnown RBP1.68□□□□□ -2.14
RSM28YDR494W DAD3P69850 94 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 88.3 ms