RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W RNA15P25299 296 aaPredicted RBP2.14□□□□□ -2.07
RPN9YDR427W RNP1P32385 249 aa2.14□□□□□ -2.07
RPN9YDR427W MAL32P38158 584 aa2.14□□□□□ -2.07
RPN9YDR427W YBR096WP38256 230 aa2.14□□□□□ -2.07
RPN9YDR427W MAL12P53341 584 aa2.14□□□□□ -2.07
RPN9YDR427W CTF19Q02732 369 aa2.14□□□□□ -2.07
RPN9YDR427W YDR209CQ03480 137 aa2.14□□□□□ -2.07
RPN9YDR427W YLR173WQ06247 608 aa2.14□□□□□ -2.07
RPN9YDR427W ATG17Q06410 417 aa2.14□□□□□ -2.07
RPN9YDR427W COQ10Q08058 207 aa2.14□□□□□ -2.07
RPN9YDR427W YOR029WQ12243 111 aa2.14□□□□□ -2.07
RPN9YDR427W PST1Q12355 444 aa2.14□□□□□ -2.07
RPN9YDR427W YHL026CP38740 315 aa2.13□□□□□ -2.07
RPN9YDR427W DAN1P47178 298 aa2.13□□□□□ -2.07
RPN9YDR427W YNL134CP53912 376 aaKnown RBP2.13□□□□□ -2.07
RPN9YDR427W ASI3P53983 676 aa2.13□□□□□ -2.07
RPN9YDR427W RRN5Q02983 363 aa2.13□□□□□ -2.07
RPN9YDR427W RSM10Q03201 203 aa2.13□□□□□ -2.07
RPN9YDR427W PEX12Q04370 399 aa2.13□□□□□ -2.07
RPN9YDR427W DCR2Q05924 578 aa2.13□□□□□ -2.07
RPN9YDR427W CSM4Q08955 156 aa2.13□□□□□ -2.07
RPN9YDR427W MSH5Q12175 901 aa2.13□□□□□ -2.07
RPN9YDR427W YPR011CQ12251 326 aa2.13□□□□□ -2.07
RPN9YDR427W EMP46Q12396 444 aa2.13□□□□□ -2.07
RPN9YDR427W YBL008W-AQ3E821 79 aa2.13□□□□□ -2.07
RPN9YDR427W SGA1P08019 549 aa2.12□□□□□ -2.07
RPN9YDR427W GOS1P38736 223 aa2.12□□□□□ -2.07
RPN9YDR427W THO1P40040 218 aaKnown RBP2.12□□□□□ -2.07
RPN9YDR427W SNZ3P43545 298 aa2.12□□□□□ -2.07
RPN9YDR427W BNA6P43619 295 aa2.12□□□□□ -2.07
RPN9YDR427W YPR147CQ06522 304 aaKnown RBP2.12□□□□□ -2.07
RPN9YDR427W SLD7Q08457 257 aa2.12□□□□□ -2.07
RPN9YDR427W ATG31Q12421 196 aa2.12□□□□□ -2.07
RPN9YDR427W YKR104WP0CE69 306 aa2.11□□□□□ -2.07
RPN9YDR427W GRE3P38715 327 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
RPN9YDR427W FCY21P40039 528 aa2.11□□□□□ -2.07
RPN9YDR427W USE1P53146 245 aa2.11□□□□□ -2.07
RPN9YDR427W MRH4P53166 561 aa2.11□□□□□ -2.07
RPN9YDR427W YPR098CQ06089 161 aa2.11□□□□□ -2.07
RPN9YDR427W EMC6Q12431 108 aa2.11□□□□□ -2.07
RPN9YDR427W NRG2P38082 220 aa2.1□□□□□ -2.07
RPN9YDR427W FZO1P38297 855 aa2.1□□□□□ -2.07
RPN9YDR427W SNZ2P53824 298 aa2.1□□□□□ -2.07
RPN9YDR427W SRL4Q03085 281 aa2.1□□□□□ -2.07
RPN9YDR427W SPG4Q04438 115 aa2.1□□□□□ -2.07
RPN9YDR427W YDR124WQ04608 324 aa2.1□□□□□ -2.07
RPN9YDR427W SYC1Q08553 188 aaPredicted RBP2.1□□□□□ -2.07
RPN9YDR427W YCT1Q12235 531 aa2.1□□□□□ -2.07
RPN9YDR427W MED4Q12343 284 aa2.1□□□□□ -2.07
RPN9YDR427W SEC22P22214 214 aa2.09□□□□□ -2.07
RPN9YDR427W SCM4P32564 187 aa2.09□□□□□ -2.07
RPN9YDR427W SGE1P33335 543 aa2.09□□□□□ -2.07
RPN9YDR427W SSH1P38353 490 aaKnown RBP2.09□□□□□ -2.07
RPN9YDR427W YHB1P39676 399 aaKnown RBP2.09□□□□□ -2.07
RPN9YDR427W YER189WP40104 122 aa2.09□□□□□ -2.07
RPN9YDR427W HOC1P47124 396 aa2.09□□□□□ -2.07
RPN9YDR427W JHD2P47156 728 aaPredicted RBP2.09□□□□□ -2.07
RPN9YDR427W GOT1Q03554 138 aa2.09□□□□□ -2.07
RPN9YDR427W PAM18Q07914 168 aa2.09□□□□□ -2.07
RPN9YDR427W RRP40Q08285 240 aaKnown RBP2.09□□□□□ -2.07
RPN9YDR427W YOR186WQ08560 144 aa2.09□□□□□ -2.07
RPN9YDR427W TCP1P12612 559 aaKnown RBP2.08□□□□□ -2.08
RPN9YDR427W CCA1P21269 546 aa2.08□□□□□ -2.08
RPN9YDR427W YOR062CP36025 268 aa2.08□□□□□ -2.08
RPN9YDR427W RCN1P36054 211 aa2.08□□□□□ -2.08
RPN9YDR427W BFR1P38934 470 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08 RIP-Chip
RPN9YDR427W FMC1P40491 155 aa2.08□□□□□ -2.08
RPN9YDR427W OST2P46964 130 aa2.08□□□□□ -2.08
RPN9YDR427W YLR179CQ06252 201 aaKnown RBP2.08□□□□□ -2.08
RPN9YDR427W RRS1Q08746 203 aaKnown RBP2.08□□□□□ -2.08
RPN9YDR427W SNU23Q12368 194 aaPredicted RBP2.08□□□□□ -2.08
RPN9YDR427W SAS5Q99314 248 aa2.08□□□□□ -2.08
RPN9YDR427W MON2P48563 1636 aaPredicted RBP2.08□□□□□ -2.08
RPN9YDR427W SWI1P09547 1314 aa2.08□□□□□ -2.08
RPN9YDR427W YLR462WO13556 202 aa2.07□□□□□ -2.08
RPN9YDR427W YCR102CP25608 368 aa2.07□□□□□ -2.08
RPN9YDR427W YKL075CP36083 450 aa2.07□□□□□ -2.08
RPN9YDR427W MRPL39P36533 70 aa2.07□□□□□ -2.08
RPN9YDR427W YEL075CP39972 122 aa2.07□□□□□ -2.08
RPN9YDR427W YJL027CP47063 138 aaPredicted RBP2.07□□□□□ -2.08
RPN9YDR427W YJR079WP47126 109 aa2.07□□□□□ -2.08
RPN9YDR427W MRPL50P53724 139 aa2.07□□□□□ -2.08
RPN9YDR427W YNL046WP53956 172 aa2.07□□□□□ -2.08
RPN9YDR427W KRE28Q04431 385 aa2.07□□□□□ -2.08
RPN9YDR427W TY1B-DR4Q07793 1604 aa2.06□□□□□ -2.08
RPN9YDR427W COS8P38723 381 aa2.06□□□□□ -2.08
RPN9YDR427W RHO3Q00245 231 aaKnown RBP2.06□□□□□ -2.08
RPN9YDR427W BEM2P39960 2167 aaKnown RBP2.06□□□□□ -2.08
RPN9YDR427W RPO26P20435 155 aa2.05□□□□□ -2.08
RPN9YDR427W YHR127WP38833 243 aaKnown RBP2.05□□□□□ -2.08
RPN9YDR427W PET117Q02771 107 aa2.05□□□□□ -2.08
RPN9YDR427W YLR283WQ05867 314 aa2.05□□□□□ -2.08
RPN9YDR427W BBP1Q12365 385 aa2.05□□□□□ -2.08
RPN9YDR427W MSA2P36157 363 aa2.04□□□□□ -2.08
RPN9YDR427W LDB7P38210 180 aa2.04□□□□□ -2.08
RPN9YDR427W FKS1P38631 1876 aaKnown RBP2.04□□□□□ -2.08
RPN9YDR427W SMD3P43321 101 aaKnown RBP2.04□□□□□ -2.08
RPN9YDR427W SNX4P47057 423 aa2.04□□□□□ -2.08
RPN9YDR427W YGL159WP53110 370 aa2.04□□□□□ -2.08
RPN9YDR427W FAR8Q05040 523 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 111.6 ms