RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C MRPS5P33759 307 aa2.89□□□□□ -1.95
CDC40YDR364C YOR062CP36025 268 aa2.89□□□□□ -1.95
CDC40YDR364C MRPL15P36523 253 aa2.89□□□□□ -1.95
CDC40YDR364C FES1P38260 290 aa2.89□□□□□ -1.95
CDC40YDR364C SOP4P39543 234 aaPredicted RBP2.89□□□□□ -1.95
CDC40YDR364C KRE29P40026 464 aa2.89□□□□□ -1.95
CDC40YDR364C AVT6P40074 448 aa2.89□□□□□ -1.95
CDC40YDR364C PRE6P40303 254 aaKnown RBP2.89□□□□□ -1.95
CDC40YDR364C SOK1P40317 901 aa2.89□□□□□ -1.95
CDC40YDR364C YIL086CP40503 102 aa2.89□□□□□ -1.95
CDC40YDR364C YJL118WP47022 219 aa2.89□□□□□ -1.95
CDC40YDR364C SSN8P47821 323 aa2.89□□□□□ -1.95
CDC40YDR364C RBL2P48606 106 aaKnown RBP2.89□□□□□ -1.95
CDC40YDR364C NUP57P48837 541 aa2.89□□□□□ -1.95
CDC40YDR364C POP6P53218 158 aa2.89□□□□□ -1.95
CDC40YDR364C YNR048WP53740 393 aa2.89□□□□□ -1.95
CDC40YDR364C MTQ1P53944 314 aa2.89□□□□□ -1.95
CDC40YDR364C ODC1Q03028 310 aa2.89□□□□□ -1.95
CDC40YDR364C YMD8Q03697 442 aa2.89□□□□□ -1.95
CDC40YDR364C YPR091CQ06833 770 aa2.89□□□□□ -1.95
CDC40YDR364C SRL2Q12020 392 aa2.89□□□□□ -1.95
CDC40YDR364C ATX2Q12067 313 aa2.89□□□□□ -1.95
CDC40YDR364C YGK3Q12222 375 aaPredicted RBP2.89□□□□□ -1.95
CDC40YDR364C YOR214CQ12282 236 aa2.89□□□□□ -1.95
CDC40YDR364C PST2Q12335 198 aaKnown RBP2.89□□□□□ -1.95
CDC40YDR364C YPL119C-AQ3E751 87 aa2.89□□□□□ -1.95
CDC40YDR364C YSF3P0C074 85 aaPredicted RBP2.88□□□□□ -1.95
CDC40YDR364C YOL163WP0CF20 169 aa2.88□□□□□ -1.95
CDC40YDR364C TFS1P14306 219 aa2.88□□□□□ -1.95
CDC40YDR364C UTR1P21373 530 aa2.88□□□□□ -1.95
CDC40YDR364C MCK1P21965 375 aaKnown RBP2.88□□□□□ -1.95
CDC40YDR364C CHA1P25379 360 aaKnown RBP2.88□□□□□ -1.95
CDC40YDR364C TIP1P27654 210 aaPredicted RBP2.88□□□□□ -1.95
CDC40YDR364C ITR2P30606 609 aa2.88□□□□□ -1.95
CDC40YDR364C ARC19P33204 171 aaKnown RBP2.88□□□□□ -1.95
CDC40YDR364C TAF14P35189 244 aa2.88□□□□□ -1.95
CDC40YDR364C YKL071WP36086 256 aa2.88□□□□□ -1.95
CDC40YDR364C UTH1P36135 365 aa2.88□□□□□ -1.95
CDC40YDR364C ECM4P36156 370 aa2.88□□□□□ -1.95
CDC40YDR364C ARC40P38328 384 aaKnown RBP2.88□□□□□ -1.95
CDC40YDR364C GEP4P38812 185 aa2.88□□□□□ -1.95
CDC40YDR364C SBE22P38814 852 aa2.88□□□□□ -1.95
CDC40YDR364C AIM10P39965 576 aaKnown RBP2.88□□□□□ -1.95
CDC40YDR364C SHO1P40073 367 aa2.88□□□□□ -1.95
CDC40YDR364C CDC40P40968 455 aaPredicted RBP2.88□□□□□ -1.95
CDC40YDR364C GCN20P43535 752 aaKnown RBP2.88□□□□□ -1.95
CDC40YDR364C MRX5P47007 382 aa2.88□□□□□ -1.95
CDC40YDR364C YJR141WP47172 347 aaPredicted RBP2.88□□□□□ -1.95
CDC40YDR364C TRM9P49957 279 aa2.88□□□□□ -1.95
CDC40YDR364C MPC1P53157 130 aaKnown RBP2.88□□□□□ -1.95
CDC40YDR364C CGR1P53188 120 aa2.88□□□□□ -1.95
CDC40YDR364C TPC1P53257 314 aa2.88□□□□□ -1.95
CDC40YDR364C NUP49Q02199 472 aa2.88□□□□□ -1.95
CDC40YDR364C GRX5Q02784 150 aa2.88□□□□□ -1.95
CDC40YDR364C SNZ1Q03148 297 aa2.88□□□□□ -1.95
CDC40YDR364C RNH202Q05635 350 aa2.88□□□□□ -1.95
CDC40YDR364C NEJ1Q06148 342 aa2.88□□□□□ -1.95
CDC40YDR364C MDM36Q06820 579 aa2.88□□□□□ -1.95
CDC40YDR364C BSC6Q08280 497 aa2.88□□□□□ -1.95
CDC40YDR364C YPL199CQ08954 240 aa2.88□□□□□ -1.95
CDC40YDR364C YRM1Q12340 786 aa2.88□□□□□ -1.95
CDC40YDR364C TRM10Q12400 293 aa2.88□□□□□ -1.95
CDC40YDR364C PRP46Q12417 451 aaPredicted RBP2.88□□□□□ -1.95
CDC40YDR364C SET6Q12529 373 aa2.88□□□□□ -1.95
CDC40YDR364C IRA1P18963 3092 aa2.88□□□□□ -1.95
CDC40YDR364C REP1P03871 373 aa2.87□□□□□ -1.95
CDC40YDR364C PRB1P09232 635 aa2.87□□□□□ -1.95
CDC40YDR364C CDC23P16522 626 aa2.87□□□□□ -1.95
CDC40YDR364C SNF6P18888 332 aa2.87□□□□□ -1.95
CDC40YDR364C POP5P28005 173 aa2.87□□□□□ -1.95
CDC40YDR364C ITR1P30605 584 aa2.87□□□□□ -1.95
CDC40YDR364C GLC7P32598 312 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C RPS27AP35997 82 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C YKL162CP36052 402 aa2.87□□□□□ -1.95
CDC40YDR364C RPS20P38701 121 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C RPS27BP38711 82 aa2.87□□□□□ -1.95
CDC40YDR364C ECM34P38728 170 aa2.87□□□□□ -1.95
CDC40YDR364C YHR035WP38769 630 aa2.87□□□□□ -1.95
CDC40YDR364C IPT1P38954 527 aa2.87□□□□□ -1.95
CDC40YDR364C AST2P39945 430 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C ALB1P47019 175 aaPredicted RBP2.87□□□□□ -1.95
CDC40YDR364C APS3P47064 194 aa2.87□□□□□ -1.95
CDC40YDR364C AIM24P47127 394 aa2.87□□□□□ -1.95
CDC40YDR364C JHD2P47156 728 aaPredicted RBP2.87□□□□□ -1.95
CDC40YDR364C BAT2P47176 376 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C AVT4P50944 713 aa2.87□□□□□ -1.95
CDC40YDR364C COS1P53822 381 aa2.87□□□□□ -1.95
CDC40YDR364C SRL4Q03085 281 aa2.87□□□□□ -1.95
CDC40YDR364C COX20Q04935 205 aa2.87□□□□□ -1.95
CDC40YDR364C YLR446WQ06204 433 aa2.87□□□□□ -1.95
CDC40YDR364C CTS2Q06350 511 aa2.87□□□□□ -1.95
CDC40YDR364C YPR174CQ06616 221 aaPredicted RBP2.87□□□□□ -1.95
CDC40YDR364C PBP4Q07362 185 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C UIP4Q08926 304 aa2.87□□□□□ -1.95
CDC40YDR364C YDL211CQ12121 372 aa2.87□□□□□ -1.95
CDC40YDR364C SIA1Q12212 622 aa2.87□□□□□ -1.95
CDC40YDR364C TPO4Q12256 659 aa2.87□□□□□ -1.95
CDC40YDR364C TPT1Q12272 230 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C UBA3Q99344 299 aa2.87□□□□□ -1.95
CDC40YDR364C DAL82P21705 255 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms