RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	OST3	P48439	350 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	SGF73	P53165	657 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	SLX9	P53251	210 aa	Predicted RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	APM1	Q00776	475 aa	Predicted RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	INP1	Q03694	420 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	SDO1	Q07953	250 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	RPL11B	Q3E757	174 aa	Predicted RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	MEX67	Q99257	599 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	PET18	P25362	215 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	RNQ1	P25367	405 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	MIG1	P27705	504 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	UPS2	P35200	230 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	MMF1	P40185	145 aa	Known RBP	3.88	□□□□□ -1.79
UPC2	YDR213W	ASK10	P48361	1146 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	RSM23	Q01163	450 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	NDJ1	Q12366	352 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	YPR064W	Q12492	139 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	MATALPHA1	P0CY06	175 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	HMLALPHA1	P0CY07	175 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	POX1	P13711	748 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	MTF1	P14908	341 aa	Known RBP	3.88	□□□□□ -1.79
UPC2	YDR213W	FUB1	P25659	250 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	DEG1	P31115	442 aa	Known RBP	3.88	□□□□□ -1.79
UPC2	YDR213W	MRPL15	P36523	253 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	YMR262W	P38430	313 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	FLO5	P38894	1075 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	VPS52	P39904	641 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	LRO1	P40345	661 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	BNA1	P47096	177 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	MOT3	P54785	490 aa	Known RBP	3.88	□□□□□ -1.79
UPC2	YDR213W	ACT1	P60010	375 aa	Known RBP	3.88	□□□□□ -1.79
UPC2	YDR213W	YPR127W	Q06494	345 aa		3.88	□□□□□ -1.79
UPC2	YDR213W	HAP2	P06774	265 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	ADK2	P26364	225 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	MRPL4	P36517	319 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	YHL026C	P38740	315 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	SFH5	P47008	294 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	YIP4	P53093	235 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	PEX30	Q06169	523 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	TAZ1	Q06510	381 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	FDH1	Q08911	376 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	SRL2	Q12020	392 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	TPO4	Q12256	659 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	GDH1	P07262	454 aa	Known RBP	3.87	□□□□□ -1.79
UPC2	YDR213W	URA6	P15700	204 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	HNM1	P19807	563 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	CDC50	P25656	391 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	COQ3	P27680	312 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	LAC1	P28496	418 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	SHG1	P38337	142 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	TRR2	P38816	342 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	SYS1	P41544	203 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	MOB2	P43563	287 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	COX16	P47081	118 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	PUS4	P48567	403 aa	Known RBP	3.87	□□□□□ -1.79
UPC2	YDR213W	SMM1	P53720	384 aa	Known RBP	3.87	□□□□□ -1.79
UPC2	YDR213W	YLR179C	Q06252	201 aa	Known RBP	3.87	□□□□□ -1.79
UPC2	YDR213W	ATG33	Q06485	197 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	YFT2	Q06676	274 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	REX4	Q08237	289 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	FYV7	Q12247	151 aa		3.87	□□□□□ -1.79
UPC2	YDR213W	CKA1	P15790	372 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	PDX1	P16451	410 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	POP5	P28005	173 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	CWP1	P28319	239 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	MNL1	P38888	796 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	NPY1	P53164	384 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	IZH3	Q07959	543 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	LAS17	Q12446	633 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	COX19	Q3E731	98 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	YDR034W-B	Q6Q5X2	51 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	PNO1	Q99216	274 aa	Known RBP	3.86	□□□□□ -1.79
UPC2	YDR213W	GEX1	P25596	615 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	DCG1	P32460	244 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	MDL1	P33310	695 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	PPZ2	P33329	710 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	GCS1	P35197	352 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	GEX2	P36173	615 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	RPA34	P47006	233 aa	Predicted RBP	3.86	□□□□□ -1.79
UPC2	YDR213W	APJ1	P53940	528 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	CTF19	Q02732	369 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	CGI121	Q03705	181 aa	Known RBP	3.86	□□□□□ -1.79
UPC2	YDR213W	SHH3	Q04487	196 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	NAT4	Q04751	285 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	ALG6	Q12001	544 aa	Known RBP	3.86	□□□□□ -1.79
UPC2	YDR213W	TGL5	Q12043	749 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	POM33	Q12164	279 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	YDL177C	Q12257	170 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	ERP4	Q12450	207 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	YOR338W	Q99326	363 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	EHD3	P28817	500 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	DSS4	P32601	143 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	YHR127W	P38833	243 aa	Known RBP	3.86	□□□□□ -1.79
UPC2	YDR213W	MET30	P39014	640 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	PMT6	P42934	759 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	YJR012C	P47087	207 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	YDR366C	P87287	132 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	SAE3	P89114	91 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	AVO2	Q04749	426 aa		3.86	□□□□□ -1.79
UPC2	YDR213W	AKR2	Q12013	749 aa		3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms