RNA–Protein interactions for RNA: YDR155C

CPR1, Transcript of Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR1, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR1	YDR155C	YHC3	P47040	408 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	UBC13	P52490	153 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	OCA2	P53949	197 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	REX2	P54964	269 aa	Known RBP	3.38	□□□□□ -1.87
CPR1	YDR155C	CIK1	Q01649	594 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	HOT1	Q03213	719 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	YDR476C	Q03362	224 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	RCE1	Q03530	315 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	YHC1	Q05900	231 aa	Known RBP	3.38	□□□□□ -1.87
CPR1	YDR155C	SSQ1	Q05931	657 aa	Predicted RBP	3.38	□□□□□ -1.87
CPR1	YDR155C	SNT309	Q06091	175 aa	Predicted RBP	3.38	□□□□□ -1.87
CPR1	YDR155C	PIN3	Q06449	215 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	ARV1	Q06541	321 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	NDL1	Q06568	189 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	IRC19	Q07843	230 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	DCI1	Q08558	271 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	UAF30	Q08747	228 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	SAS5	Q99314	248 aa		3.38	□□□□□ -1.87
CPR1	YDR155C	MSI1	P13712	422 aa		3.37	□□□□□ -1.87
CPR1	YDR155C	ERD2	P18414	219 aa		3.37	□□□□□ -1.87
CPR1	YDR155C	PTC1	P35182	281 aa		3.37	□□□□□ -1.87
CPR1	YDR155C	MDE1	P47095	244 aa		3.37	□□□□□ -1.87
CPR1	YDR155C	SHE4	P51534	789 aa		3.37	□□□□□ -1.87
CPR1	YDR155C	RPL6A	Q02326	176 aa	Known RBP	3.37	□□□□□ -1.87
CPR1	YDR155C	GRE1	Q08969	168 aa		3.37	□□□□□ -1.87
CPR1	YDR155C	TPT1	Q12272	230 aa	Known RBP	3.37	□□□□□ -1.87
CPR1	YDR155C	RPN6	Q12377	434 aa		3.37	□□□□□ -1.87
CPR1	YDR155C	RPS23A	P0CX29	145 aa	Known RBP	3.36	□□□□□ -1.87
CPR1	YDR155C	RPS23B	P0CX30	145 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	DBP3	P20447	523 aa	Known RBP	3.36	□□□□□ -1.87
CPR1	YDR155C	SCO1	P23833	295 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	DBR1	P24309	405 aa	Known RBP	3.36	□□□□□ -1.87
CPR1	YDR155C	PUP2	P32379	260 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	YER084W	P40057	128 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	MAL13	P53338	473 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	CUS2	P53830	285 aa	Predicted RBP	3.36	□□□□□ -1.87
CPR1	YDR155C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
CPR1	YDR155C	TVP15	Q03860	143 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	RVB1	Q03940	463 aa	Known RBP	3.36	□□□□□ -1.87
CPR1	YDR155C	KRE28	Q04431	385 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	TAZ1	Q06510	381 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	MCP1	Q12106	302 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	JLP1	Q12358	412 aa		3.36	□□□□□ -1.87
CPR1	YDR155C	MDN1	Q12019	4910 aa	Known RBP	3.36	□□□□□ -1.87
CPR1	YDR155C	SOD1	P00445	154 aa	Known RBP	3.35	□□□□□ -1.87
CPR1	YDR155C	MER1	P16523	270 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	EXG1	P23776	448 aa	Known RBP	3.35	□□□□□ -1.87
CPR1	YDR155C	GIT1	P25346	518 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	RPS5	P26783	225 aa	Known RBP	3.35	□□□□□ -1.87
CPR1	YDR155C	MDL1	P33310	695 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	ECM8	P38246	354 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	BIG1	P38813	335 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	KRE29	P40026	464 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	TOS2	P50078	622 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	PRM15	Q03262	622 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	RIM9	Q04734	239 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	ATG38	Q05789	226 aa	Known RBP	3.35	□□□□□ -1.87
CPR1	YDR155C	RRP9	Q06506	573 aa	Known RBP	3.35	□□□□□ -1.87
CPR1	YDR155C	UIP4	Q08926	304 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	NIP7	Q08962	181 aa	Known RBP	3.35	□□□□□ -1.87
CPR1	YDR155C	BTS1	Q12051	335 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	FRE8	Q12209	686 aa		3.35	□□□□□ -1.87
CPR1	YDR155C	ARO3	P14843	370 aa	Known RBP	3.34	□□□□□ -1.87
CPR1	YDR155C	CPR2	P23285	205 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	HSP30	P25619	332 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.87	not detected
CPR1	YDR155C	CLB6	P32943	380 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	SBE22	P38814	852 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	RGI1	P40043	161 aa	Predicted RBP	3.34	□□□□□ -1.87
CPR1	YDR155C	VHS2	P40463	436 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	GAB1	P41733	394 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	YJR085C	P47131	105 aa	Known RBP	3.34	□□□□□ -1.87
CPR1	YDR155C	VPS60	Q03390	229 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	YDR102C	Q03864	110 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	GMC1	Q04399	608 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	YLR345W	Q06137	509 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	YPR147C	Q06522	304 aa	Known RBP	3.34	□□□□□ -1.87
CPR1	YDR155C	BRX1	Q08235	291 aa	Known RBP	3.34	□□□□□ -1.87
CPR1	YDR155C	FIT3	Q08907	204 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	YPR202W	Q08993	238 aa		3.34	□□□□□ -1.87
CPR1	YDR155C	UGA1	P17649	471 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	VMA11	P32842	164 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	SPT10	P35208	640 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	MRPL17	P36528	281 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	COX14	P39103	70 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	BRR6	P53062	197 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	STD1	Q02794	444 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	YPL077C	Q02831	240 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	FMN1	Q03778	218 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	TSA2	Q04120	196 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	DBP9	Q06218	594 aa	Known RBP	3.33	□□□□□ -1.88
CPR1	YDR155C	CTS2	Q06350	511 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	FSH3	Q99369	266 aa		3.33	□□□□□ -1.88
CPR1	YDR155C	RPS16A	P0CX51	143 aa	Known RBP	3.32	□□□□□ -1.88
CPR1	YDR155C	RPS16B	P0CX52	143 aa	Known RBP	3.32	□□□□□ -1.88
CPR1	YDR155C	NAM2	P11325	894 aa		3.32	□□□□□ -1.88
CPR1	YDR155C	RPC19	P28000	142 aa	Known RBP	3.32	□□□□□ -1.88
CPR1	YDR155C	DEP1	P31385	405 aa		3.32	□□□□□ -1.88
CPR1	YDR155C	LHP1	P33399	275 aa	Known RBP	3.32	□□□□□ -1.88
CPR1	YDR155C	CLG1	P35190	452 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms