RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP1	YDL230W	TFB5	Q3E7C1	72 aa	Predicted RBP	10.85	□□□□□ -0.67
PTP1	YDL230W	COX5B	P00425	151 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	MES1	P00958	751 aa	Known RBP	10.84	□□□□□ -0.67
PTP1	YDL230W	CPR4	P25334	318 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	TIP1	P27654	210 aa	Predicted RBP	10.84	□□□□□ -0.67
PTP1	YDL230W	FLO10	P36170	1169 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	10.84	□□□□□ -0.67	not detected
PTP1	YDL230W	SWM2	P40342	146 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	IDP2	P41939	412 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	YHC3	P47040	408 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	HSV2	P50079	448 aa	Predicted RBP	10.84	□□□□□ -0.67
PTP1	YDL230W	ACS2	P52910	683 aa	Known RBP	10.84	□□□□□ -0.67
PTP1	YDL230W	YML108W	Q03759	105 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	MDM30	Q05930	598 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	MCT1	Q12283	360 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	ISA2	Q12425	185 aa		10.84	□□□□□ -0.67
PTP1	YDL230W	YPT1	P01123	206 aa	Known RBP	10.83	□□□□□ -0.68
PTP1	YDL230W	SPO7	P18410	259 aa		10.83	□□□□□ -0.68
PTP1	YDL230W	POP8	P38208	133 aa		10.83	□□□□□ -0.68
PTP1	YDL230W	AIM3	P38266	947 aa	Known RBP	10.83	□□□□□ -0.68
PTP1	YDL230W	BMT5	P40493	336 aa		10.83	□□□□□ -0.68
PTP1	YDL230W	YGL159W	P53110	370 aa		10.83	□□□□□ -0.68
PTP1	YDL230W	TIM44	Q01852	431 aa		10.83	□□□□□ -0.68
PTP1	YDL230W	YDR248C	Q03786	193 aa		10.83	□□□□□ -0.68
PTP1	YDL230W	ANT1	Q06497	328 aa		10.83	□□□□□ -0.68
PTP1	YDL230W	TPI1	P00942	248 aa	Known RBP	10.82	□□□□□ -0.68
PTP1	YDL230W	PDX1	P16451	410 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	RFA1	P22336	621 aa	Known RBP	10.82	□□□□□ -0.68
PTP1	YDL230W	ERG8	P24521	451 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	SOF1	P33750	489 aa	Known RBP	10.82	□□□□□ -0.68
PTP1	YDL230W	CTK2	P46962	323 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	NUP53	Q03790	475 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	GRC3	Q07845	632 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	GRE1	Q08969	168 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	TFC7	Q12415	435 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	FLO9	P39712	1322 aa		10.82	□□□□□ -0.68
PTP1	YDL230W	CDC36	P06100	191 aa	Predicted RBP	10.81	□□□□□ -0.68
PTP1	YDL230W	SED4	P25365	1065 aa		10.81	□□□□□ -0.68
PTP1	YDL230W	AFG1	P32317	509 aa		10.81	□□□□□ -0.68
PTP1	YDL230W	EMP24	P32803	203 aa	Known RBP	10.81	□□□□□ -0.68
PTP1	YDL230W	FIG1	P38224	298 aa		10.81	□□□□□ -0.68
PTP1	YDL230W	ADO1	P47143	340 aa	Known RBP	10.81	□□□□□ -0.68
PTP1	YDL230W	NIF3	P53081	288 aa		10.81	□□□□□ -0.68
PTP1	YDL230W	MRP51	Q02950	344 aa		10.81	□□□□□ -0.68
PTP1	YDL230W	SEC16	P48415	2195 aa	Known RBP	10.81	□□□□□ -0.68
PTP1	YDL230W	SOL3	P38858	249 aa		10.8	□□□□□ -0.68
PTP1	YDL230W	SSO2	P39926	295 aa		10.8	□□□□□ -0.68
PTP1	YDL230W	ECO1	P43605	281 aa		10.8	□□□□□ -0.68
PTP1	YDL230W	PRY1	P47032	299 aa		10.8	□□□□□ -0.68
PTP1	YDL230W	YJL016W	P47072	561 aa		10.8	□□□□□ -0.68
PTP1	YDL230W	ACC1	Q00955	2233 aa	Known RBP	10.8	□□□□□ -0.68
PTP1	YDL230W	FUS3	P16892	353 aa	Known RBP	10.79	□□□□□ -0.68
PTP1	YDL230W	ERG3	P32353	365 aa		10.79	□□□□□ -0.68
PTP1	YDL230W	YIR035C	P40579	254 aa		10.79	□□□□□ -0.68
PTP1	YDL230W	SMX3	P54999	86 aa	Predicted RBP	10.79	□□□□□ -0.68
PTP1	YDL230W	RPP1A	P05318	106 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP1	YDL230W	NAM2	P11325	894 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	COS8	P38723	381 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	YIL169C	P40442	995 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	AVT4	P50944	713 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	PCP1	P53259	346 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	CAB5	Q03941	241 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	YLR108C	Q12259	485 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	YOR032W-A	Q8TGS1	66 aa		10.78	□□□□□ -0.68
PTP1	YDL230W	YFR010W-A	P0C5N0	62 aa		10.77	□□□□□ -0.69
PTP1	YDL230W	YLL053C	P0CD98	152 aa		10.77	□□□□□ -0.69
PTP1	YDL230W	RPS16A	P0CX51	143 aa	Known RBP	10.77	□□□□□ -0.69
PTP1	YDL230W	RPS16B	P0CX52	143 aa	Known RBP	10.77	□□□□□ -0.69
PTP1	YDL230W	UME6	P39001	836 aa		10.77	□□□□□ -0.69
PTP1	YDL230W	YND1	P40009	630 aa		10.77	□□□□□ -0.69
PTP1	YDL230W	GLR1	P41921	483 aa	Known RBP	10.77	□□□□□ -0.69
PTP1	YDL230W	HOL1	P53389	586 aa		10.77	□□□□□ -0.69
PTP1	YDL230W	DIG2	Q03373	323 aa	Known RBP	10.77	□□□□□ -0.69
PTP1	YDL230W	RTT103	Q05543	409 aa		10.77	□□□□□ -0.69
PTP1	YDL230W	RRT7	Q07829	113 aa		10.77	□□□□□ -0.69
PTP1	YDL230W	RFA3	P26755	122 aa	Known RBP	10.76	□□□□□ -0.69
PTP1	YDL230W	TRR1	P29509	319 aa	Known RBP	10.76	□□□□□ -0.69
PTP1	YDL230W	PDC2	P32896	925 aa		10.76	□□□□□ -0.69
PTP1	YDL230W	YPC1	P38298	316 aa		10.76	□□□□□ -0.69
PTP1	YDL230W	GCV3	P39726	170 aa	Predicted RBP	10.76	□□□□□ -0.69
PTP1	YDL230W	NSA1	P53136	463 aa	Predicted RBP	10.76	□□□□□ -0.69
PTP1	YDL230W	ALG9	P53868	555 aa	Known RBP	10.76	□□□□□ -0.69
PTP1	YDL230W	RSM23	Q01163	450 aa		10.76	□□□□□ -0.69
PTP1	YDL230W	NOC4	Q06512	552 aa	Predicted RBP	10.76	□□□□□ -0.69
PTP1	YDL230W	SCP1	Q08873	200 aa		10.76	□□□□□ -0.69
PTP1	YDL230W	PIN2	Q12057	282 aa		10.76	□□□□□ -0.69
PTP1	YDL230W	CDC39	P25655	2108 aa	Known RBP	10.75	□□□□□ -0.69
PTP1	YDL230W	MRT4	P33201	236 aa	Known RBP	10.75	□□□□□ -0.69
PTP1	YDL230W	LSM12	P38828	187 aa	Known RBP	10.75	□□□□□ -0.69
PTP1	YDL230W	MOB2	P43563	287 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	GNP1	P48813	663 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	SCY1	P53009	804 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	UFD1	P53044	361 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	YGL117W	P53133	265 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	ERV25	P54837	211 aa	Known RBP	10.75	□□□□□ -0.69
PTP1	YDL230W	YDR209C	Q03480	137 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	TY1A-DR3	Q12441	440 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	HUT1	Q12520	339 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	UBA3	Q99344	299 aa		10.75	□□□□□ -0.69
PTP1	YDL230W	CPR3	P25719	182 aa		10.74	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms