RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C RTR2Q12378 196 aa1.17□□□□□ -2.22
MSH3YCR092C YHR214C-EQ8TGK0 99 aa1.17□□□□□ -2.22
MSH3YCR092C YPT6Q99260 215 aa1.17□□□□□ -2.22
MSH3YCR092C YOL162WP0CF19 215 aa1.17□□□□□ -2.22
MSH3YCR092C CDC34P14682 295 aa1.17□□□□□ -2.22
MSH3YCR092C MRPS28P21771 286 aa1.17□□□□□ -2.22
MSH3YCR092C FUN19P28003 413 aaPredicted RBP1.17□□□□□ -2.22
MSH3YCR092C PTP2P29461 750 aa1.17□□□□□ -2.22
MSH3YCR092C VMA11P32842 164 aa1.17□□□□□ -2.22
MSH3YCR092C YBL029WP38201 376 aa1.17□□□□□ -2.22
MSH3YCR092C YPC1P38298 316 aa1.17□□□□□ -2.22
MSH3YCR092C BIG1P38813 335 aa1.17□□□□□ -2.22
MSH3YCR092C YIL169CP40442 995 aa1.17□□□□□ -2.22
MSH3YCR092C SLM1P40485 686 aa1.17□□□□□ -2.22
MSH3YCR092C YJL218WP40892 196 aaKnown RBP1.17□□□□□ -2.22
MSH3YCR092C SNO3P43544 222 aa1.17□□□□□ -2.22
MSH3YCR092C TOS2P50078 622 aa1.17□□□□□ -2.22
MSH3YCR092C AIF1P52923 378 aa1.17□□□□□ -2.22
MSH3YCR092C SLU7Q02775 382 aaKnown RBP1.17□□□□□ -2.22
MSH3YCR092C YHP1Q04116 353 aa1.17□□□□□ -2.22
MSH3YCR092C MIX14Q04341 121 aa1.17□□□□□ -2.22
MSH3YCR092C SCW10Q04951 389 aa1.17□□□□□ -2.22
MSH3YCR092C PIN3Q06449 215 aa1.17□□□□□ -2.22
MSH3YCR092C YOR378WQ08902 515 aa1.17□□□□□ -2.22
MSH3YCR092C FRE5Q08908 694 aa1.17□□□□□ -2.22
MSH3YCR092C UIP4Q08926 304 aa1.17□□□□□ -2.22
MSH3YCR092C YDL199CQ12407 687 aa1.17□□□□□ -2.22
MSH3YCR092C PRP46Q12417 451 aaPredicted RBP1.17□□□□□ -2.22
MSH3YCR092C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
MSH3YCR092C SEN1Q00416 2231 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C MDN1Q12019 4910 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C SAL1D6W196 494 aa1.16□□□□□ -2.22
MSH3YCR092C VMA6P32366 345 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C MSS1P32559 526 aaPredicted RBP1.16□□□□□ -2.22
MSH3YCR092C MTC7P32633 139 aa1.16□□□□□ -2.22
MSH3YCR092C PRS2P38620 318 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C AIM10P39965 576 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C MPM1P40364 252 aa1.16□□□□□ -2.22
MSH3YCR092C TDA10P42938 290 aa1.16□□□□□ -2.22
MSH3YCR092C WWM1P43582 211 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C MRX5P47007 382 aa1.16□□□□□ -2.22
MSH3YCR092C GWT1P47026 490 aa1.16□□□□□ -2.22
MSH3YCR092C NQM1P53228 333 aaPredicted RBP1.16□□□□□ -2.22
MSH3YCR092C YAP1802P53309 568 aa1.16□□□□□ -2.22
MSH3YCR092C YNR064CP53750 290 aa1.16□□□□□ -2.22
MSH3YCR092C YNL181WP53878 407 aa1.16□□□□□ -2.22
MSH3YCR092C INN1P53901 409 aa1.16□□□□□ -2.22
MSH3YCR092C TIM10P87108 93 aa1.16□□□□□ -2.22
MSH3YCR092C HOR7Q05827 59 aa1.16□□□□□ -2.22
MSH3YCR092C DCS1Q06151 350 aa1.16□□□□□ -2.22
MSH3YCR092C MCH1Q07376 486 aa1.16□□□□□ -2.22
MSH3YCR092C RPN13O13563 156 aa1.16□□□□□ -2.22
MSH3YCR092C FUS3P16892 353 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C DBF2P22204 572 aa1.16□□□□□ -2.22
MSH3YCR092C ARO7P32178 256 aa1.16□□□□□ -2.22
MSH3YCR092C ERG3P32353 365 aa1.16□□□□□ -2.22
MSH3YCR092C UTP30P36144 274 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C CBP4P37267 147 aa1.16□□□□□ -2.22
MSH3YCR092C YHR180WP38868 163 aa1.16□□□□□ -2.22
MSH3YCR092C DIM1P41819 318 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C RPA43P46669 326 aa1.16□□□□□ -2.22
MSH3YCR092C DPB11P47027 764 aaPredicted RBP1.16□□□□□ -2.22
MSH3YCR092C YDL183CP48569 320 aa1.16□□□□□ -2.22
MSH3YCR092C MRM2P53123 320 aa1.16□□□□□ -2.22
MSH3YCR092C NSA1P53136 463 aaPredicted RBP1.16□□□□□ -2.22
MSH3YCR092C SCW4P53334 386 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C SUB1P54000 292 aaKnown RBP1.16□□□□□ -2.22
MSH3YCR092C YLR152CP54072 576 aa1.16□□□□□ -2.22
MSH3YCR092C YDR274CP87283 123 aa1.16□□□□□ -2.22
MSH3YCR092C YTH1Q06102 208 aaPredicted RBP1.16□□□□□ -2.22
MSH3YCR092C FIT3Q08907 204 aa1.16□□□□□ -2.22
MSH3YCR092C YLR108CQ12259 485 aa1.16□□□□□ -2.22
MSH3YCR092C RPN6Q12377 434 aa1.16□□□□□ -2.22
MSH3YCR092C TRM13Q12383 476 aa1.16□□□□□ -2.22
MSH3YCR092C TIM9O74700 87 aa1.15□□□□□ -2.22
MSH3YCR092C MRP1P10662 321 aaKnown RBP1.15□□□□□ -2.22
MSH3YCR092C SAG1P20840 650 aa1.15□□□□□ -2.22
MSH3YCR092C PRE7P23724 241 aaKnown RBP1.15□□□□□ -2.22
MSH3YCR092C SBA1P28707 216 aaKnown RBP1.15□□□□□ -2.22
MSH3YCR092C PRE4P30657 266 aa1.15□□□□□ -2.22
MSH3YCR092C MRPL17P36528 281 aa1.15□□□□□ -2.22
MSH3YCR092C IPT1P38954 527 aa1.15□□□□□ -2.22
MSH3YCR092C RPL13BP40212 199 aaKnown RBP1.15□□□□□ -2.22
MSH3YCR092C OST1P41543 476 aaKnown RBP1.15□□□□□ -2.22
MSH3YCR092C YCH1P42937 148 aa1.15□□□□□ -2.22
MSH3YCR092C SSN8P47821 323 aa1.15□□□□□ -2.22
MSH3YCR092C YDL186WP48568 277 aa1.15□□□□□ -2.22
MSH3YCR092C YGL185CP53100 379 aa1.15□□□□□ -2.22
MSH3YCR092C YDR286CQ05530 114 aa1.15□□□□□ -2.22
MSH3YCR092C NOC4Q06512 552 aaPredicted RBP1.15□□□□□ -2.22
MSH3YCR092C YPS3Q12303 508 aa1.15□□□□□ -2.22
MSH3YCR092C UTP23Q12339 254 aaKnown RBP1.15□□□□□ -2.22
MSH3YCR092C RPL13AQ12690 199 aaPredicted RBP1.15□□□□□ -2.22
MSH3YCR092C ISN1Q99312 450 aa1.15□□□□□ -2.22
MSH3YCR092C GCN1P33892 2672 aaKnown RBP1.15□□□□□ -2.22
MSH3YCR092C RAS2P01120 322 aaKnown RBP1.15□□□□□ -2.23
MSH3YCR092C SPS100P13130 326 aa1.15□□□□□ -2.23
MSH3YCR092C YPK2P18961 677 aa1.15□□□□□ -2.23
MSH3YCR092C CPR4P25334 318 aa1.15□□□□□ -2.23
MSH3YCR092C PUT3P25502 979 aaPredicted RBP1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms