RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W SSU72P53538 206 aaPredicted RBP1.31□□□□□ -2.2
SNF5YBR289W COX5AP00424 153 aa1.31□□□□□ -2.2
SNF5YBR289W MATALPHA1P0CY06 175 aa1.31□□□□□ -2.2
SNF5YBR289W HMLALPHA1P0CY07 175 aa1.31□□□□□ -2.2
SNF5YBR289W VPS1P21576 704 aaKnown RBP1.31□□□□□ -2.2
SNF5YBR289W MIG1P27705 504 aa1.31□□□□□ -2.2
SNF5YBR289W NTF2P33331 125 aaKnown RBP1.31□□□□□ -2.2
SNF5YBR289W YGL088WP53151 121 aa1.31□□□□□ -2.2
SNF5YBR289W RNH1Q04740 348 aa1.31□□□□□ -2.2
SNF5YBR289W YOR186WQ08560 144 aa1.31□□□□□ -2.2
SNF5YBR289W CLP1Q08685 445 aaPredicted RBP1.31□□□□□ -2.2
SNF5YBR289W SCO1P23833 295 aa1.3□□□□□ -2.2
SNF5YBR289W ERG2P32352 222 aa1.3□□□□□ -2.2
SNF5YBR289W MIG2P53035 382 aa1.3□□□□□ -2.2
SNF5YBR289W RRN5Q02983 363 aa1.3□□□□□ -2.2
SNF5YBR289W YLR283WQ05867 314 aa1.3□□□□□ -2.2
SNF5YBR289W YOL107WQ12239 342 aa1.3□□□□□ -2.2
SNF5YBR289W MET2P08465 486 aa1.3□□□□□ -2.2
SNF5YBR289W VPS21P36017 210 aaKnown RBP1.3□□□□□ -2.2
SNF5YBR289W BUD13P46947 266 aaPredicted RBP1.3□□□□□ -2.2
SNF5YBR289W MRH4P53166 561 aa1.3□□□□□ -2.2
SNF5YBR289W SYF2P53277 215 aaPredicted RBP1.3□□□□□ -2.2
SNF5YBR289W PEX10Q05568 337 aa1.3□□□□□ -2.2
SNF5YBR289W GEP5Q12393 293 aa1.3□□□□□ -2.2
SNF5YBR289W CHD1P32657 1468 aa1.29□□□□□ -2.2
SNF5YBR289W RPL24AP04449 155 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W SPT8P38915 602 aa1.29□□□□□ -2.2
SNF5YBR289W RPL10P41805 221 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W RPC17P47076 161 aa1.29□□□□□ -2.2
SNF5YBR289W YMR114CQ04471 368 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W YDR114CQ04597 100 aa1.29□□□□□ -2.2
SNF5YBR289W YPL150WQ12152 901 aa1.29□□□□□ -2.2
SNF5YBR289W IES3Q12345 250 aa1.29□□□□□ -2.2
SNF5YBR289W YPL119C-AQ3E751 87 aa1.29□□□□□ -2.2
SNF5YBR289W YPK9Q12697 1472 aa1.29□□□□□ -2.2
SNF5YBR289W SKI3P17883 1432 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W TRM732Q03496 1420 aa1.29□□□□□ -2.2
SNF5YBR289W XRN1P22147 1528 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W HIS1P00498 297 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W RAD10P06838 210 aa1.29□□□□□ -2.2
SNF5YBR289W EMC2P47133 292 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W COG7P53195 279 aa1.29□□□□□ -2.2
SNF5YBR289W ALG9P53868 555 aaKnown RBP1.29□□□□□ -2.2
SNF5YBR289W SEI1Q06058 285 aa1.29□□□□□ -2.2
SNF5YBR289W RPL26AP05743 127 aaKnown RBP1.28□□□□□ -2.2
SNF5YBR289W SNA3P14359 133 aa1.28□□□□□ -2.2
SNF5YBR289W LDB7P38210 180 aa1.28□□□□□ -2.2
SNF5YBR289W ECO1P43605 281 aa1.28□□□□□ -2.2
SNF5YBR289W RPL26BP53221 127 aaKnown RBP1.28□□□□□ -2.2
SNF5YBR289W RSM27P53305 110 aa1.28□□□□□ -2.2
SNF5YBR289W SNZ2P53824 298 aa1.28□□□□□ -2.2
SNF5YBR289W TLG1Q03322 224 aa1.28□□□□□ -2.2
SNF5YBR289W NNT1Q05874 261 aa1.28□□□□□ -2.2
SNF5YBR289W CTR3Q06686 241 aa1.28□□□□□ -2.2
SNF5YBR289W YCT1Q12235 531 aa1.28□□□□□ -2.2
SNF5YBR289W TRM3Q07527 1436 aa1.28□□□□□ -2.2
SNF5YBR289W SWI1P09547 1314 aa1.28□□□□□ -2.2
SNF5YBR289W VPS15P22219 1454 aa1.28□□□□□ -2.2
SNF5YBR289W YBR056W-AI2HB52 66 aa1.28□□□□□ -2.2
SNF5YBR289W JIP3O13555 125 aa1.28□□□□□ -2.2
SNF5YBR289W DAL82P21705 255 aa1.28□□□□□ -2.2
SNF5YBR289W DOA4P32571 926 aa1.28□□□□□ -2.2
SNF5YBR289W COG3P40094 801 aa1.28□□□□□ -2.2
SNF5YBR289W NUP84P52891 726 aa1.28□□□□□ -2.2
SNF5YBR289W NOP13P53883 403 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SNF5YBR289W ADH6Q04894 360 aaKnown RBP1.28□□□□□ -2.2
SNF5YBR289W YKR104WP0CE69 306 aa1.27□□□□□ -2.21
SNF5YBR289W SEC22P22214 214 aa1.27□□□□□ -2.21
SNF5YBR289W RSA4P25382 515 aaKnown RBP1.27□□□□□ -2.21
SNF5YBR289W YER085CP40058 173 aa1.27□□□□□ -2.21
SNF5YBR289W BNA6P43619 295 aa1.27□□□□□ -2.21
SNF5YBR289W SPO77Q06134 477 aa1.27□□□□□ -2.21
SNF5YBR289W PAM18Q07914 168 aa1.27□□□□□ -2.21
SNF5YBR289W YLR030WQ07967 263 aa1.27□□□□□ -2.21
SNF5YBR289W YPR096CO13587 100 aa1.27□□□□□ -2.21
SNF5YBR289W DPB2P24482 689 aaPredicted RBP1.27□□□□□ -2.21
SNF5YBR289W MSA2P36157 363 aa1.27□□□□□ -2.21
SNF5YBR289W YER188WP40103 239 aa1.27□□□□□ -2.21
SNF5YBR289W GON7P46984 123 aa1.27□□□□□ -2.21
SNF5YBR289W YJR012CP47087 207 aa1.27□□□□□ -2.21
SNF5YBR289W PER33Q12144 273 aa1.27□□□□□ -2.21
SNF5YBR289W RAS2P01120 322 aaKnown RBP1.26□□□□□ -2.21
SNF5YBR289W RHO1P06780 209 aaKnown RBP1.26□□□□□ -2.21
SNF5YBR289W CAM1P29547 415 aaKnown RBP1.26□□□□□ -2.21
SNF5YBR289W PHO89P38361 574 aa1.26□□□□□ -2.21
SNF5YBR289W SIP3P38717 1229 aa1.26□□□□□ -2.21
SNF5YBR289W SHC1P39000 512 aa1.26□□□□□ -2.21
SNF5YBR289W NIF3P53081 288 aa1.26□□□□□ -2.21
SNF5YBR289W DIA1P54005 336 aa1.26□□□□□ -2.21
SNF5YBR289W DCR2Q05924 578 aa1.26□□□□□ -2.21
SNF5YBR289W CFT1Q06632 1357 aaKnown RBP1.26□□□□□ -2.21
SNF5YBR289W YMR316C-AI2HB70 103 aa1.26□□□□□ -2.21
SNF5YBR289W YGL159WP53110 370 aa1.26□□□□□ -2.21
SNF5YBR289W PET117Q02771 107 aa1.26□□□□□ -2.21
SNF5YBR289W SPG4Q04438 115 aa1.26□□□□□ -2.21
SNF5YBR289W ESP1Q03018 1630 aa1.26□□□□□ -2.21
SNF5YBR289W MSN4P33749 630 aa1.25□□□□□ -2.21
SNF5YBR289W YHI9P38765 294 aa1.25□□□□□ -2.21
SNF5YBR289W TEM1P38987 245 aa1.25□□□□□ -2.21
SNF5YBR289W YPR172WQ06608 200 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms