RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 DKC1O60832 514 aaKnown RBP eCLIP16.51■□□□□ 0.23
PNKP-204ENST00000594661 TACC1O75410 805 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 SETSIPP0DME0 302 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ACTN1P12814 892 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 NCKAP1LP55160 1127 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ARID5AQ03989 594 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ALCAMQ13740 583 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 PPP1R7Q15435 360 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 CCDC38Q502W7 563 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 BSNDQ8WZ55 320 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ANKRD27Q96NW4 1050 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 SNX12Q9UMY4 172 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ATG7O95352 703 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 GNAT1P11488 350 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 SLC9A1P19634 815 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 CCNG1P51959 295 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 GTF2BQ00403 316 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 MKRN3Q13064 507 aaKnown RBP16.51■□□□□ 0.23
PNKP-204ENST00000594661 ZNF268Q14587 947 aaPredicted RBP16.51■□□□□ 0.23
PNKP-204ENST00000594661 EXOC3L4Q17RC7 722 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 DPY19L2P1Q6NXN4 242 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ACCSQ96QU6 501 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 MMP19Q99542 508 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 MKNK1Q9BUB5 465 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 KIFC3Q9BVG8 833 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 ST6GALNAC4Q9H4F1 302 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 SLC12A4Q9UP95 1085 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 CAPN6Q9Y6Q1 641 aa16.51■□□□□ 0.23
PNKP-204ENST00000594661 FARP2O94887 1054 aaPredicted RBP16.5■□□□□ 0.23
PNKP-204ENST00000594661 MOCS3O95396 460 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 NPTX2P47972 431 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 ARHGAP22Q7Z5H3 698 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 SDCCAG8Q86SQ7 713 aaPredicted RBP16.5■□□□□ 0.23
PNKP-204ENST00000594661 TEX9Q8N6V9 391 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 CCDC63Q8NA47 563 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 FAM81AQ8TBF8 368 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 AGAP11Q8TF27 550 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 HINFPQ9BQA5 517 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 TMEM206Q9H813 350 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 TMBIM4Q9HC24 238 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 XPNPEP1Q9NQW7 623 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 PDLIM7Q9NR12 457 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 CYP26B1Q9NR63 512 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 MYH9P35579 1960 aaKnown RBP16.5■□□□□ 0.23
PNKP-204ENST00000594661 MYH10P35580 1976 aa16.5■□□□□ 0.23
PNKP-204ENST00000594661 DNAJC25-GNG10A0A024R161 153 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PDLIM1O00151 329 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 ABLIM1O14639 778 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 RNF8O76064 485 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PYGBP11216 843 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 COPB2P35606 906 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 ABL2P42684 1182 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 SLC7A5Q01650 507 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 KCTD2Q14681 263 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
PNKP-204ENST00000594661 ASIC2Q16515 512 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 GKAP1Q5VSY0 366 aaPredicted RBP16.49■□□□□ 0.23
PNKP-204ENST00000594661 SLC9A9Q8IVB4 645 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PORCNQ9H237 461 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PCIF1Q9H4Z3 704 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PLCB1Q9NQ66 1216 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 ZNF302Q9NR11 478 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 GDF3Q9NR23 364 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 AIPL1Q9NZN9 384 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 FRMD4BQ9Y2L6 1034 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 MAFBQ9Y5Q3 323 aaPredicted RBP16.49■□□□□ 0.23
PNKP-204ENST00000594661 CCT8L1PA6NM43 557 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 CCDC169A6NNP5 214 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 RBAK-RBAKDNI3L0D1 243 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PJA2O43164 708 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 DIAPH2O60879 1101 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 CCND1P24385 295 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PON1P27169 355 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 PAK2Q13177 524 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 LY6KQ17RY6 165 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 XKR3Q5GH77 459 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 ANKRD13CQ8N6S4 541 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 TMEM161BQ8NDZ6 487 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 ATL2Q8NHH9 583 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 MS4A4AQ96JQ5 239 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 CBWD1Q9BRT8 395 aa16.49■□□□□ 0.23
PNKP-204ENST00000594661 GSTTP1A0A1W2PQM5 241 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 EXOC3O60645 756 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 DGAT1O75907 488 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 ARIH2O95376 493 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 UCHL3P15374 230 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 CDC25CP30307 473 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
PNKP-204ENST00000594661 DMP1Q13316 513 aaPredicted RBP16.48■□□□□ 0.23
PNKP-204ENST00000594661 KLHDC7AQ5VTJ3 777 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 HHATQ5VTY9 493 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 LRIG3Q6UXM1 1119 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 IFT20Q8IY31 132 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms